Solanum lycopersicum mRNA Solyc02g068720.2.1

mRNA details  
Name
Solyc02g068720.2.1
Type
mRNA
Length
4,294
Organism
Solanum lycopersicum
Description
Nck-associated protein 1 (AHRD V1 **-- B7ZGK5_LOTJA); contains Interpro domain(s) IPR019137 Nck-associated protein 1
Location(s)
SL2.50ch02:38640297..38657472
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
17176
Nb exon
23
Sifter term
  • GO:0005515
  • GO:0016563
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g068720.2.1 Nck-associated protein 1 (AHRD V1 **-- B7ZGK5_LOTJA); contains Interpro domain(s) IPR019137 Nck-associated protein 1

ATGACTAAACCGAGGCAGCAGTTTCAAGCGGAAGATGTATTGTCGACATCGCCAACTGCAGTGCGCCCAAGAGAATGGGAAGGACCAGCTAGGTGGACTGAGTACTTGGGTCCTGATATATCTTCAACAATTGGTCCTAAGGCTTCTAGAAATGGTAGCTCTGATGGTAGTGCCCATAGCTCTAGCGGGTCAACTAATAAAGGCTTGAACATGCAATGGGTAAACCAACTCACTCAAGTAGCTGAAGGGCTGATGGCAAAAATGTATAGGTTTAATCAGATATTAGATTACCCTGATGTCATTGGACATGCATTCTCTGAAGCATTTTGGAAGTCTGGTGTGTTTCCAAATCATCCAAAAATCTGTATTTTACTATCAAAGAAGTTTCCGGAGCACCACAGCAAGTTACAATTAGAAAGAATTGACAAATTTGCTTTGGATGCTATGAATGATGGTGCTGAAGTTCATTTGCAAAGCTTGGAACCATGGATTCAAATGCTTCTTGACCTGATGGCATTTCGAGAACACGCCTTGCGTCTAATATTGGATCTAAGCAGTACAGTGATTACCTTGTTGCCTCACCAGAACTCTCTCATACTGCATGCGTTTATGGACCTTTTTTGTGCTTTTGTTCGTGTAAATATATTTTCAGAAAAGATACCAAGGAAAATGATGTTGCAAACATACAATTTGCTTCATGCCATGGCAAGAAATGATAGGGACTGCGATTTTTATCACAGGTTAATCCAGTTTGTTGATTCCTACGATCCACCCTTGAAGGGTCTGCATGAAGACCTGAATTTTGTCAGCCCTCGTATTGGAGAGGTATTAGAGGCTGTTGGTCCCATTATATTCTTATCAACTGATACACGAAAGCTCAGAAATGAGGGTTTCTTAAGTCCTTTCCATCCCCGATACCCTGATATACTGACAAATTCAGCTCATCCAATGAGAGCCCAAGACCTAGCCAATGTTACATCATATAGGGAATGGGTGTTATTTGGTTATCTTGTCTGTCCTGATGAGCTTCTTAGGGTCACCAGCATTGATATTGCTTCGATTGTACTCAAGGAAAATCTAGTCCTTCCTCTGTTCAGGGACGAGTACATATTGCTGCATGAGGATTATCAGTTATACGTCTTACCACGGATACTGGAGTCGAAGAAGATGGCAAAATCTGGACGGACGAAACAAAAAGAAGCGGATCTAGAGTATAGTGTAGCCAAACAGGTTGAGAAAATGATAAGTGAAGTGCATGACCAAGCATTATATTACTGTGATGCCATACATCGTGAAAGAAGAATATTCTTAAAACAGGAGATTGGAAGAATGGTACTTTTTTTCTCTGACCAGCCCAGCTTGTTGGCACCTAATATTCAGATGGTTTATTCGGCCTTAGCCTTTGCTCAAAGTGAGGTTCTATGGTATTTCCAACATGTAGGAATAGCTTCATCGAAGTCAAGAGCTGCCAGAACGGTTCCGGTAGAAATGGATCCAAGTGATCCAACGATTGGCTTCTTGTTGGATGGAATGGATCGTCTTTGTTGCCTAGTGCGCAAGTATATTGCTGCTATTAGAGGATACGCCTTATCATATCTATCATCCTGTGCTGGTAGAATCCGATTTTTGTTGGGTACCCCTGGCATGGTTGCTCTCGACTTGGATGCTACTCTGAAAGGACTTTTCCAGAAGATAGTTCAACATCTTGAGAATATACCCAAGCCACAGGGTGAAAATATTTCTGCCATCACATGTGATTTATCAGAGTTGCGCAAAGATTGGTTATCTATATTGATGGTTGTTACTTCTGCTCGTTCTTCTATAAACATCCGACATTTGGAAAAGGCTACAGTGTCTACTGGAAAGGAAGGGCTATTATCGGAAGGAAATTCTGCATACAACTGGTCCAGGTGTGTTGATGAGCTTGAATACCTGTTATCTAAACATGGGAGTCTAAAGAAGCTTTACTTCTATCACCAACACCTTACAACAGTTTTCCGTAATACTATGTTTGGTCCAGAAGGTCGTCCACAACATTGCTGTGCATGGCTTGGTGTCGCCAGTAGTTTTCCTGAATGCGCTTCTTCAATAGTCCCCGAAGAGGTAACTAAAATTGGTCGTGATGCGGTTCTTTATGTTGAATCCCTGATTGAATCTATCATGGGAGGTCTGGAAGGGTTGATAAATATTCTCGACTCGGAAGGGGGATTTGGCTCTTTAGAGTTGCAGCTTTTTCCAGAGCAGGCGGCACATCTCATGAATTTGACTTCTAGAATTTCTGCTCCTTCTGCAAAGTCCCCAAGAGCCATGTCGGGCTATCATTTACCAGGCTACGAGAGCTACCCTGAAAATGATAATTCCATAAAAATGTTAGAAGCTGCAATGCAGAGGTTGACCAACCTTTGCTCAGTTTTAAATGACATGGAGCCTATATGTGTTCTAAACCACGTCTTCGTTCTGAGGGAGTACATGAGAGAATGTATCCTTGGGAACTTCAGAAGGAGACTGCTTGCTGTTCTGAAAACTGATAATGATCTTCAGCGTCCTACTGTCTTGGAAGCACTGATACGCAGACATACAGCTATTGTCCATCTAGCAGAACAACACATCAGCATGGACCTGACTCAAGGTATCCGGGAGATATTACTAACAGAGACATTCTGTGGTCCAGTTTCATCTTTGCACTTGTTTGAGAAAGCTACAGAGCAGCATACTGGATCAGCCACTGAAACAGTATGTAACTGGTACATTGAAAACGTGGTCAAGGATGTATCAGGTGCAGGTATCCTCTTTGCGCCCCGGCACAGATGCTTCAAGAGCACGAGGCCGGTTGGTGGATATTTTGCTGAGTCAGTGACAGATCTCAGGGAACTGAAAGCATTTGTCCGTGTTTTTGGTGGTTATGGAGTTGACAGGTTAGATAGAATGATGAAAGAGCACACAGCTGCACTCTTGAACTGTATTGACACATCATTACGGGCAAACCGAGATAATCTGGAGGCTGTTGCTGGAAGCATGCATTCTGGTGACCGAATAGATAGAGACACAAATATCAAGCAAATTGTTGATTTGGACACTATGGTTGGGTTCTGTATTCAGGCTGGACAGGCTGTTGCTTTTGACCGCCTTCTTGCAGAGGCTGGTACAGCTGTTCTTGAAGAAGGTGCTCCTTTGATACATTCATTACTGACAGCGGCTGCTAAGCATTTACCTGATGAAATACCTGAGAAAAAGGAGATTAGAAGGTTGAAAAGAGTAGCAAACAATTTTAATATAGCTAGTGACCATGACGCTGAGTGGGTCAGATCCATACTAGAAGAGGTTGGAGGTGCAAATGATGCTTCCTGGAGCTTGTTGCCTTATTTGTTTGCCACTCTAATGACATCAAATATATGGAATAGTAGTGGCTTTAATGTGGATACTGGGGGTTTCAGCAACAACATCTATTGCTTGGCAAGGTGCATTTCTGCAGTAATTGCAGGAAGTGAATTTGTTAGACTTGAAAGAGAGCATCACATGAGACAATCTTTTTCAAATGGTCATGTCGGTGAAACATTGGATCCTGAAACACACAACCAAATAACAGTTGAGACAAACATAAAATCCACAATGCAGCTCTTTGTGAAGTTTTCCTCTGGAATTATTCTAGACTCTTGGAGCGAGAATACCAGATCTCATCTTGTGTCAAAGCTCATTTTCCTGGACCAGTTTTGTGAGATCTCCCCTTACCTACCAAGAAGCACGCTGGATGCGTATGTTCCTTACTCCATTATCCGCTCAATCTACAGTCAATACTATGGAAGTTCATCTCCTGCGCCACTGGCACTACTTGGTGATTCACCCCGTCATTCACCGGCTGTATCTCTGGCACATTCGTCCCCTGCAATGAGGCAGCATCGCAATGATTCCACTCCTCAGTCAAATTCTAACGATTCAGGTTATTTCAAGCCATCCTCAAGCCATGCCCAGGATCAACTATATGATACAGAAAGTGGAAGCATTGAAAATAGGCCTCGAAATGTTAGGCGTTCTGGACCATTGGAATACAGTGCAACTCGAAAATTAAAACACGTGGACAGCTCAACATCAGCAAGCACAGGTCCCAGTCCATTGCCAAGGTTTGCAGTGTCTAGATCCGGTCCTATATCTTACAAGTGACAAAATAGTGAACTTTTGAAACATGTAAATTTCTTTCTTCTGTTCTATTGCTAGTCAGTAGTGGACTGTCTACGATGTTCATACAAATTTTTGTGTATCTATACATAAAATTCCTCTATTTATTCCTCAACGTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g068720.2.1SL2.50ch02:38640432..386574721,386-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g068720.2SL2.50ch02:38640297..3865747217,176-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g068720.2.1.1SL2.50ch02:38657053..38657472420-n/a
exonexon:Solyc02g068720.2.1.10SL2.50ch02:38650299..38650441143-1
exonexon:Solyc02g068720.2.1.11SL2.50ch02:38648823..38648955133-n/a
exonexon:Solyc02g068720.2.1.12SL2.50ch02:38648222..38648332111-n/a
exonexon:Solyc02g068720.2.1.13SL2.50ch02:38648028..3864810679-2
exonexon:Solyc02g068720.2.1.14SL2.50ch02:38647300..38647493194-n/a
exonexon:Solyc02g068720.2.1.15SL2.50ch02:38646805..38646950146-1
exonexon:Solyc02g068720.2.1.16SL2.50ch02:38646107..3864618882-n/a
exonexon:Solyc02g068720.2.1.17SL2.50ch02:38645737..38645847111-n/a
exonexon:Solyc02g068720.2.1.18SL2.50ch02:38644586..38644711126-n/a
exonexon:Solyc02g068720.2.1.19SL2.50ch02:38644364..38644503140-1
exonexon:Solyc02g068720.2.1.2SL2.50ch02:38656876..3865695075-n/a
exonexon:Solyc02g068720.2.1.20SL2.50ch02:38644182..3864427897-n/a
exonexon:Solyc02g068720.2.1.21SL2.50ch02:38642467..38643458992-1
exonexon:Solyc02g068720.2.1.22SL2.50ch02:38641599..38641811213-1
exonexon:Solyc02g068720.2.1.23SL2.50ch02:38640297..38640919623-n/a
exonexon:Solyc02g068720.2.1.3SL2.50ch02:38655645..3865572581-n/a
exonexon:Solyc02g068720.2.1.4SL2.50ch02:38655357..3865543781-n/a
exonexon:Solyc02g068720.2.1.5SL2.50ch02:38655174..3865525683-1
exonexon:Solyc02g068720.2.1.6SL2.50ch02:38652177..3865226185-n/a
exonexon:Solyc02g068720.2.1.7SL2.50ch02:38651311..38651436126-n/a
exonexon:Solyc02g068720.2.1.8SL2.50ch02:38651055..38651162108-n/a
exonexon:Solyc02g068720.2.1.9SL2.50ch02:38650537..3865058145-n/a
intronintron:Solyc02g068720.2.1.10SL2.50ch02:38650442..38650536n/a-n/a
intronintron:Solyc02g068720.2.1.11SL2.50ch02:38648956..38650298n/a-n/a
intronintron:Solyc02g068720.2.1.12SL2.50ch02:38648333..38648822n/a-n/a
intronintron:Solyc02g068720.2.1.13SL2.50ch02:38648107..38648221n/a-n/a
intronintron:Solyc02g068720.2.1.14SL2.50ch02:38647494..38648027n/a-n/a
intronintron:Solyc02g068720.2.1.15SL2.50ch02:38646951..38647299n/a-n/a
intronintron:Solyc02g068720.2.1.16SL2.50ch02:38646189..38646804n/a-n/a
intronintron:Solyc02g068720.2.1.17SL2.50ch02:38645848..38646106n/a-n/a
intronintron:Solyc02g068720.2.1.18SL2.50ch02:38644712..38645736n/a-n/a
intronintron:Solyc02g068720.2.1.19SL2.50ch02:38644504..38644585n/a-n/a
intronintron:Solyc02g068720.2.1.2SL2.50ch02:38656951..38657052n/a-n/a
intronintron:Solyc02g068720.2.1.20SL2.50ch02:38644279..38644363n/a-n/a
intronintron:Solyc02g068720.2.1.21SL2.50ch02:38643459..38644181n/a-n/a
intronintron:Solyc02g068720.2.1.22SL2.50ch02:38641812..38642466n/a-n/a
intronintron:Solyc02g068720.2.1.23SL2.50ch02:38640920..38641598n/a-n/a
intronintron:Solyc02g068720.2.1.3SL2.50ch02:38655726..38656875n/a-n/a
intronintron:Solyc02g068720.2.1.4SL2.50ch02:38655438..38655644n/a-n/a
intronintron:Solyc02g068720.2.1.5SL2.50ch02:38655257..38655356n/a-n/a
intronintron:Solyc02g068720.2.1.6SL2.50ch02:38652262..38655173n/a-n/a
intronintron:Solyc02g068720.2.1.7SL2.50ch02:38651437..38652176n/a-n/a
intronintron:Solyc02g068720.2.1.8SL2.50ch02:38651163..38651310n/a-n/a
intronintron:Solyc02g068720.2.1.9SL2.50ch02:38650582..38651054n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17722857%2Fdetails feature 17722857
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