Solanum lycopersicum mRNA Solyc02g069090.2.1

mRNA details  
Name
Solyc02g069090.2.1
Type
mRNA
Length
3,553
Organism
Solanum lycopersicum
Description
Cathepsin B (AHRD V1 ***- Q1HER6_NICBE); contains Interpro domain(s) IPR015643 Peptidase C1A, cathepsin B
Location(s)
SL2.50ch02:39054022..39060835
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0050790
  • GO:0008234
Length
6814
Nb exon
11
Sifter term
GO:0030984
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g069090.2.1 Cathepsin B (AHRD V1 ***- Q1HER6_NICBE); contains Interpro domain(s) IPR015643 Peptidase C1A, cathepsin B

ATAACATATAGGCGGAATGATCTGATAGACCCTCGTATTTGAATTGATTTGTATTTTGAACCCTTCTACTTATCCCTTTGTCATTTGGACCCCTAAACTAAATAAAACACAATACTTGAAAACCCTTTCTCATCGTTTGTGTGTGCGTGTATTGCAATCAATTTACACATGAAATTTCACGTCATTTTTTAATGACACGTCAATATTATTATTATTATTTTTTAATGACACATCAGAAATTAAAAATTTAAAATAAATAATATTTTTTTAAAAGGTACAATTCTTTTTCTCTCTCTATACTCATTTTCCATATTCTCACTTCATCTTCTTCCTCCCCACCCTCTATCCTTCACCCAAAAAATAAAATCACCACCTACCCCCATCCGTTTTCTTTTCTTCTCTTTTTTTTTACGGACAAAACACATATTCTTTTGTATATCCCGCCGGTAACATGAAATTTCGTTCATAGATTTCATATTCCTTCTCCATCAATGCCACCGCCGACCACCCTGTTCCTCCGCCAAAAGGGGTGTTTTTTGATCATAGCCTTTTTTTGTTCCATTAAGCTTGTCTTCATACAAAAAAATAGTTTCTTCCATTTAAACTTGTCTTCTAAAAAAAAATGACATTGAGAATGAGAGTTTTGAAAAGAAAATCTTGAATTTTAAATTGGATCTAAATTAATATTTCTTTGTTTCCTTTTATTTTCCTTACTTTGTAAGCCTTTTGTAGTTGAAATTTTACTCTTTAATAGTGGTATTTGGTGAAACTAAAATGATTTTTTTTAAAAAAAATCTAAGTCTATTAATGGGGGTGAGCGTGACTGAAAAAAGAAGTTGAGGTAAAGATGAAGTGGTAAATAGTTGAAAGCCGAAAGAGGGGTTGGTGCGGATATGAAATTTTTGGAGATGACTAAAAATGGGAGTTAGGACAGATATGGGGTGAGGGATGGCTGAAAAGAGGGATTGAAGTAGCAGGTTGGCTGATAAGGAAGGTTGGGAAGGTGATAAGCGTGAGAGTGGGGGATGAATGAAGAAGATCACGAGGTGAGGGGAAGAAGAAACTTTTTTTTAAAAAATATTATTTTATATTGTTTAAAATGAAAATGTTCTTCAATTATCTTTGGGTGTGTGTGTTACACTCTCTCGCCAACTCATTCATTTTAATGTCACATAAGTATAGTCAATGATCAGATGGGTTTGAAATATTGCATTTTAATGAATTGAAGGGTCAAATTGACAAATGATTAAGTAGAAGAGATAAATATAAATTAAGTTATTATATTAAAATCTAAATATTCTATCATTAAGAATTTTTATTTCTCAATGTTAAGTGTTAGCTAAACTAATCTAGTACCTTACCAACATATTATTACTAAATTATTTTTATAGTATTATATTTTTCTATTCAAGTCGGAAAGATATACGTATATTCATAAGACCCATTACGTGATCTTTCATATTTCTTTATTTATTATTTATTTCATAAAAGAACAAGAACTGAAATTACGGCCCATTCTCCAAATAATGTTAAACAAACAAGTGGATACCGGATAGTTCATTTCAAATTTAAAATATAGTATTAAAAAATTAGATTCCATTTAATATTTTACCCTTCGAGATGAGTCAGTTTAGTTTGCCAATAATTATATATATAGATAATTCAAAATCAATTTCTCTTCAATGCTTTTTGAATCGAACTTGTCTAGTGATATTTACCTCCTCTTTATAATTGACAAGCTATTATACGATGAGAATTTACCCGTAAAGAAAATGCGAATTATCCTGAATTTCCAATTAGAAACATTATTTTTAGCCAAACAGGTGATAATAGATCTCATCATTAATTTATCTTTAAAATGACAAATTAGTGCACTCTTATATCCAATAAAAGAATTACACGTGTTCCTCAGCTAAACATTTTCCAGACCTAGGGAACTGAACATTATAATTAATTCAAAATTATCTTAAAAGTGGAGCAATAATAAAAGCTTTGATCTTTTTTAATACGTCAAACAAAGAGGGCCAATAATTCATTCATCTTTTTCCTTGTATCTATAAATATATTTTCTGGGGTTCCTCCATTTTTAAGCCACCATTACAGAACCCAAGAAAAAGGGCCCAAAAATATGAAGCACATAGCCACTTTTTTGCTTTTGGTTTCTGTCTCCACCCTTGTTTTGCAGGTTGTTGCAGAAAATCCAATATCCCAAGCTAAAGCGGAATCTGCAATCCTTCAGGACTCAATCGTCAAACAGGTTAATGAAAATGAAAAAGCTGGATGGAGAGCTGCACTAAACCCTCAATTCTCGAATTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGAGTTAAGCCCACAAGAAAGGGTGATTTGAAGGGCATCCCTATTTTAACTCATCCAAAACTTTTGAAGTTACCCCAAGAGTTTGATGCACGAGTGGCTTGGCCTCAGTGTAGCACTATTGGGAGAATTCTTGATCAGGGACATTGTGGTTCTTGTTGGGCTTTTGGTGCTGCTGAGTCGTTGTCTGATCGTTTCTGTATTCATTATGGATTGAATATCTCTCTGTCAGCAAATGATATCATAGCATGCTGTGGCTATTTATGCGGGGATGGTTGTGATGGTGGATATCCGTTAGAAGCTTGGAAATACTTTGTTCGCAAGGGTGTGGTCACTGAAGAGTGTGACCCTTACTTTGATAATAAGGGATGTTCTCACCCTGGATGTGAACCTGGATATCCCACTCCACAGTGCAAGAGGAAGTGTGTTAAAGAGAATCTACTCTGGAGTAAATCCAAGCATTTTGGTATTAATGCATACCTGATTAACTCCGACCCATACAGTATCATGACAGAAGTTTACAAGAATGGACCAGTTGAGGTTTCTTTTACTGTTTACGAGGATTTCGCTCACTACAAGTCTGGTGTTTACAAGCACATAAATGGTGAGGAAATGGGAGGCCATGCTGTTAAGCTCATTGGATGGGGAACCTCTGAGGATGGAGAGGACTATTGGCTCCTTGCCAATCAATGGAACAGAGGATGGGGTGATGATGGTTACTTCAAGATCAGAAGAGGAACAAACGAGTGTGGCATTGAAGAAGAAGTGGTTGCAGGAATGCCTTCAGCCAAAAACCTGAACGTGGAACTTGATGTCTCTGATGCTTTACTTGACGCCTCAATGTGATTGCTAATTCTTCAACTAAACACTAAATAGGATTCAAGTTTCTGAAGACTTGGGGAATAATAACATTTTAAGCTTCATATTCTTCCCCTCTTAAGTTATCTGCAACATTTGTAATCTGCAGTTGTTCCACAATCCTAATTATCTGTGGAAGTGTTTTCCTTGTCTGTTATGTATTTCTTCACAAGTACTCTCTCTGCCAATCTTGACCAAGTTAAAACATTATCATATGTTGTACTTGATATTATCAATGAAATGTATTTAGACTTAGTTGTTGCTGTTATAATCAAACTTGCGCTTCATGTAAAGTTCTCTCTTTTTATTGTTCACGTTACCAAAACTTTATTGGATAAATTAAATAAATTGCAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g069090.2.1SL2.50ch02:39054387..39058707353-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g069090.2SL2.50ch02:39054022..390608356,814-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g069090.2.1.1SL2.50ch02:39058651..390608352,185-n/a
exonexon:Solyc02g069090.2.1.10SL2.50ch02:39054800..3905483536-n/a
exonexon:Solyc02g069090.2.1.11SL2.50ch02:39054022..39054522501-n/a
exonexon:Solyc02g069090.2.1.2SL2.50ch02:39057033..3905708654-n/a
exonexon:Solyc02g069090.2.1.3SL2.50ch02:39056862..3905694281-n/a
exonexon:Solyc02g069090.2.1.4SL2.50ch02:39056590..39056746157-2
exonexon:Solyc02g069090.2.1.5SL2.50ch02:39056478..390564825-n/a
exonexon:Solyc02g069090.2.1.6SL2.50ch02:39056303..3905637775-n/a
exonexon:Solyc02g069090.2.1.7SL2.50ch02:39056095..39056220126-n/a
exonexon:Solyc02g069090.2.1.8SL2.50ch02:39055746..39055964219-n/a
exonexon:Solyc02g069090.2.1.9SL2.50ch02:39054923..39055036114-n/a
intronintron:Solyc02g069090.2.1.10SL2.50ch02:39054836..39054922n/a-n/a
intronintron:Solyc02g069090.2.1.11SL2.50ch02:39054523..39054799n/a-n/a
intronintron:Solyc02g069090.2.1.2SL2.50ch02:39057087..39058650n/a-n/a
intronintron:Solyc02g069090.2.1.3SL2.50ch02:39056943..39057032n/a-n/a
intronintron:Solyc02g069090.2.1.4SL2.50ch02:39056747..39056861n/a-n/a
intronintron:Solyc02g069090.2.1.5SL2.50ch02:39056483..39056589n/a-n/a
intronintron:Solyc02g069090.2.1.6SL2.50ch02:39056378..39056477n/a-n/a
intronintron:Solyc02g069090.2.1.7SL2.50ch02:39056221..39056302n/a-n/a
intronintron:Solyc02g069090.2.1.8SL2.50ch02:39055965..39056094n/a-n/a
intronintron:Solyc02g069090.2.1.9SL2.50ch02:39055037..39055745n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17723204%2Fdetails feature 17723204
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