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Solanum lycopersicum mRNA Solyc02g070100.2.1

mRNA details  
Name
Solyc02g070100.2.1
Type
mRNA
Length
1,960
Organism
Solanum lycopersicum
Description
ATP-dependent RNA helicase (AHRD V1 ***- C6LRM7_GIALA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch02:39935633..39942338
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
6706
Nb exon
15
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g070100.2.1 ATP-dependent RNA helicase (AHRD V1 ***- C6LRM7_GIALA); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTATATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACGGTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTTGTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAGGATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAAATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCACTAACCCTAGTCCCAGGAACCTCTTTTTGCAGTTCGTGAAGGAGTTCATCCACTCCTCCAACGAACATGGTTTTGAAAAAGGCGTGGATCCACGCTTGAACT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g070100.2.1SL2.50ch02:39935632..39942136586+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g070100.2SL2.50ch02:39935633..399423386,706+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g070100.2.1.1SL2.50ch02:39935633..39935782150+n/a
exonexon:Solyc02g070100.2.1.10SL2.50ch02:39939272..3993936796+n/a
exonexon:Solyc02g070100.2.1.11SL2.50ch02:39939744..39939881138+n/a
exonexon:Solyc02g070100.2.1.12SL2.50ch02:39940527..3994060983+n/a
exonexon:Solyc02g070100.2.1.13SL2.50ch02:39941290..3994132738+1
exonexon:Solyc02g070100.2.1.14SL2.50ch02:39941404..39941618215+2
exonexon:Solyc02g070100.2.1.15SL2.50ch02:39942071..39942338268+n/a
exonexon:Solyc02g070100.2.1.2SL2.50ch02:39935865..39936023159+n/a
exonexon:Solyc02g070100.2.1.3SL2.50ch02:39936107..3993619690+n/a
exonexon:Solyc02g070100.2.1.4SL2.50ch02:39936296..39936424129+n/a
exonexon:Solyc02g070100.2.1.5SL2.50ch02:39936785..39936885101+n/a
exonexon:Solyc02g070100.2.1.6SL2.50ch02:39937078..39937192115+1
exonexon:Solyc02g070100.2.1.7SL2.50ch02:39937737..39937868132+n/a
exonexon:Solyc02g070100.2.1.8SL2.50ch02:39938724..3993878966+n/a
exonexon:Solyc02g070100.2.1.9SL2.50ch02:39938912..39939091180+n/a
intronintron:Solyc02g070100.2.1.1SL2.50ch02:39935783..39935864n/a+n/a
intronintron:Solyc02g070100.2.1.10SL2.50ch02:39939368..39939743n/a+n/a
intronintron:Solyc02g070100.2.1.11SL2.50ch02:39939882..39940526n/a+n/a
intronintron:Solyc02g070100.2.1.12SL2.50ch02:39940610..39941289n/a+n/a
intronintron:Solyc02g070100.2.1.13SL2.50ch02:39941328..39941403n/a+n/a
intronintron:Solyc02g070100.2.1.14SL2.50ch02:39941619..39942070n/a+n/a
intronintron:Solyc02g070100.2.1.2SL2.50ch02:39936024..39936106n/a+n/a
intronintron:Solyc02g070100.2.1.3SL2.50ch02:39936197..39936295n/a+n/a
intronintron:Solyc02g070100.2.1.4SL2.50ch02:39936425..39936784n/a+n/a
intronintron:Solyc02g070100.2.1.5SL2.50ch02:39936886..39937077n/a+n/a
intronintron:Solyc02g070100.2.1.6SL2.50ch02:39937193..39937736n/a+n/a
intronintron:Solyc02g070100.2.1.7SL2.50ch02:39937869..39938723n/a+n/a
intronintron:Solyc02g070100.2.1.8SL2.50ch02:39938790..39938911n/a+n/a
intronintron:Solyc02g070100.2.1.9SL2.50ch02:39939092..39939271n/a+n/a
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