Solanum lycopersicum mRNA Solyc02g071730.2.1

mRNA details  
Name
Solyc02g071730.2.1
Type
mRNA
Length
993
Organism
Solanum lycopersicum
Description
MADS-box transcription factor AGAMOUS (AHRD V1 **-* Q8GTY3_HELAN); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch02:41094016..41099470
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5455
Nb exon
9
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g071730.2.1 MADS-box transcription factor AGAMOUS (AHRD V1 **-* Q8GTY3_HELAN); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box

CCTTAGTCCAAAGTCTCTTCCATTTTCTGCATCTACAAAATCCTCTTCATATATTATATACTAATTTGCAACCAAAAAACTTAAAAATCTTCTCTTTCCTTTCCTTACAAGGTGAAGTAATGGACTTCCAAAGTGATCTAACCAGAGAGATCTCACCACAAAGGAAACTAGGAAGGGGGAAAATTGAGATCAAAAGGATCGAAAACACGACGAATCGACAAGTAACATTCTGCAAGAGGCGCAATGGTTTGCTTAAAAAGGCTTATGAATTGTCTGTGCTCTGTGATGCTGAGGTTGCTTTGGTTGTCTTCTCAAACAGAGGCAGACTCTATGAGTATGCCAACAACAGTGTGAAAGCAACAATCGAGAGGTACAAGAAAGCATGCTCAGATTCCTCAAACACTGGTTCAGTATCCGAGGCCAATGCTCAGTATTACCAGCAAGAAGCCTCCAAACTGCGCGCACAAATTGGAAATCTGATGAACCAAAACAGGAACATGATGGGTGAAGCTCTTGCTGGAATGAAACTCAAAGAACTGAAGAATCTGGAGCAAAGAATTGAAAAAGGGATTAGCAAAATCCGATCCAAAAAGAATGAGCTGTTGTTTGCTGAAATTGAGTATATGCAGAAGAGGGAAGTTGATTTACACAACAACAATCAGTACCTGAGAGCAAAGATTGCTGAAACTGAGAGAGCTCAGCATCAGCATCAGCAGATGAACTTGATGCCAGGGAGTTCATCAAACTATCATGAGCTTGTGCCTCCACCTCAGCAATTCGATACTCGAAACTATCTACAAGTTAATGGATTGCAAACCAACAACCATTACCCTAGACAAGACCAACCCCCTATTCAACTAGTCTAATGTGCTTGAGAGATTGTCTTCTTTCTGATGTGATCTACATATAATCCACAAAAGAAGACTGCTATTAAGCTTGAAGATTAATGGAACTTAAGTATGTATACCATATTATTAATTACTTGTTGCATGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g071730.2.1SL2.50ch02:41094142..41099217249-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g071730.2SL2.50ch02:41094016..410994705,455-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g071730.2.1.1SL2.50ch02:41099360..41099470111-n/a
exonexon:Solyc02g071730.2.1.2SL2.50ch02:41098988..41099225238-1
exonexon:Solyc02g071730.2.1.3SL2.50ch02:41095702..4109578382-n/a
exonexon:Solyc02g071730.2.1.4SL2.50ch02:41095183..4109524462-1
exonexon:Solyc02g071730.2.1.5SL2.50ch02:41094983..41095082100-n/a
exonexon:Solyc02g071730.2.1.6SL2.50ch02:41094766..4109480742-n/a
exonexon:Solyc02g071730.2.1.7SL2.50ch02:41094607..4109464842-n/a
exonexon:Solyc02g071730.2.1.8SL2.50ch02:41094253..41094437185-1
exonexon:Solyc02g071730.2.1.9SL2.50ch02:41094016..41094146131-n/a
intronintron:Solyc02g071730.2.1.2SL2.50ch02:41099226..41099359n/a-n/a
intronintron:Solyc02g071730.2.1.3SL2.50ch02:41095784..41098987n/a-n/a
intronintron:Solyc02g071730.2.1.4SL2.50ch02:41095245..41095701n/a-n/a
intronintron:Solyc02g071730.2.1.5SL2.50ch02:41095083..41095182n/a-n/a
intronintron:Solyc02g071730.2.1.6SL2.50ch02:41094808..41094982n/a-n/a
intronintron:Solyc02g071730.2.1.7SL2.50ch02:41094649..41094765n/a-n/a
intronintron:Solyc02g071730.2.1.8SL2.50ch02:41094438..41094606n/a-n/a
intronintron:Solyc02g071730.2.1.9SL2.50ch02:41094147..41094252n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17726130%2Fdetails feature 17726130
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)