Solanum lycopersicum mRNA Solyc02g077040.2.1

mRNA details  
Name
Solyc02g077040.2.1
Type
mRNA
Length
1,268
Organism
Solanum lycopersicum
Description
Cathepsin B-like cysteine proteinase 5 (AHRD V1 **-* CPR5_CAEEL); contains Interpro domain(s) IPR013128 Peptidase C1A, papain
Location(s)
SL2.50ch02:42112777..42114420
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0008234
Length
1644
Nb exon
2
Sifter term
  • GO:0030984
  • GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g077040.2.1 Cathepsin B-like cysteine proteinase 5 (AHRD V1 **-* CPR5_CAEEL); contains Interpro domain(s) IPR013128 Peptidase C1A, papain

TATTCACTCAGCCTCTCTTTTAGTTTTTAACTTAGTTCCTATTTTGATATTTCATTACCATTTACCATCAATGGCTTCCAATTTTTTCCTCAAGAATATTACTGTTGTTCTTCTTCTTTTTTCCATTCTTAGCCTATATCCCTTTATAGTAACTTCCCGCAACTTAAAAGAATTATCCATGCTTGAAAGGCATGAAAATTGGATGGTTCATCATGGACGTGTATACAAAGATGATATAGAAAAAGAACACCGCTTCAAAACATTCAAGGAAAACGTTGAGTTCATCGAATCTTTCAACAAGAACGGAACTCAACGTTATAAGCTAGCCATCAATAAATATGCTGATCTGACCACTGAGGAATTCACAACATCATTTATGGGGCTCGACACTTCATTACTATCCCAGCAAGAATCAACAGCTACAACAACGTCCTTTAAATATGATAGTGTGACTGAAGTTCCAAATAGCATGGACTGGAGAAAGAGAGGGAGTGTCACAGGAGTCAAGGATCAAGGTGTATGTGGATGTTGTTGGGCATTTTCTGCGGCCGCGGCTATAGAAGGAGCATATCAAATTGCAAACAACGAACTAATCTCTCTTTCAGAGCAACAACTATTGGATTGCTCTACGCAGAACAAAGGTTGTGAGGGCGGACTAATGACTGTCGCTTACGACTTCTTACTTCAGAACAATGGCGGGGGCATTACCACAGAGACTAATTATCCTTATGAAGAAGCTCAAAATGTTTGCAAGACCGAACAACCAGCAGCAGTTACTATCAATGGCTACGAAGTCGTACCATCTGACGAGTCATCGTTGTTGAAAGCTGTAGTGAATCAACCTATTTCTGTTGGTATTGCGGCTAACGATGAGTTTCATATGTACGGAAGTGGAATATATGATGGAAGTTGTAATTCTAGACTGAATCATGCAGTGACAGTTATAGGTTATGGGACAAGTGAAGAAGATGGTACAAAATATTGGATAGTGAAGAATTCATGGGGGAGTGATTGGGGTGAGGAAGGATATATGAGAATTGCTAGAGATGTTGGAGTTGATGGTGGCCATTGTGGCATTGCAAAGGTTGCTTCGTTCCCTACTGTTTGAATTTATATTACAAAAAAATAGGCATTGCTATTAATATTATGTAGAAGAGTTGCCAATGCTATAGCTTGTAATTCGTGTTTCAACAATAAATTAATCAATATATGAATGAGAAGTATTTTTCTTTTTTAAAATGATACAGTCAAACAGTGATGGTTACTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g077040.2.1SL2.50ch02:42112846..42114260346+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g077040.2SL2.50ch02:42112777..421144201,644+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g077040.2.1.1SL2.50ch02:42112777..42113300524+n/a
exonexon:Solyc02g077040.2.1.2SL2.50ch02:42113677..42114420744+n/a
intronintron:Solyc02g077040.2.1.1SL2.50ch02:42113301..42113676n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17727525%2Fdetails feature 17727525
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