Solanum lycopersicum mRNA Solyc02g077920.2.1
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Name | Type |
Length
1,048
|
Organism |
Description
Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
|
Location(s)
SL2.50ch02:42743081..42745257
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- Length
- 2177
- Sifter term
- GO:0003700
![]() | spliced mRNA sequence, including UTRs |
>Solyc02g077920.2.1 Squamosa promoter binding-like protein (AHRD V1 ***- Q0PY35_SOLLC); contains Interpro domain(s) IPR004333 Transcription factor, SBP-box
CCTTGACAAAAAGTTAGTGGAGTAACTACCTAGGAGTAAATTCAATAGTAGACCTTGAAAAGAACTTTAGCAAAGTCATCATAAATGCTCTTCACGTCTCATGTACTATGTTAAGGAATGGTCACATTTCTCTCTGCATTAAAGCTAGTTCATGTTAAAAGTTGAGGCCGGTAGTAGTTTCAACTTTCAATTTAATTCCACCTTTCCTGGCCCACTTCTGTACGGAACACCAATCAGAATCTTTAGTTCATCTTAACACCAAAGCATCTCCACTTAGACACTTACTAGACTTCACATAGGAGGAAAAATATGGAACTGGTGGTCCTCACACGTTCTCCTCACAGGGATGGAAACTAACAAATGGGAAGGGAAGAGAAGCATTACTGAAGCTGAAAAGGAAGAGGATGAACATGGAAGTGTTGAAGAGGATAGCAAAAGAAAAAGGGTATTGACTCTCTCTGGTAGGAAGCTAGTTGGTGAAGGGTCGGCACATCCTTCTTGCCAGGTCGATCAGTGCACTGCAGATATGGCAGATGCCAAGCCATACCATCGCCGCCACAAGGTGTGTGAGTTCCATTCAAAGTCTCCAATAGTACTTATTAGTGGACTCCAGAAGCGATTCTGTCAGCAATGTAGCAGATTTCATCTGTTAGCAGAGTTTGATGATGCTAAGAGGAGTTGCCGAAGGCGTTTGGCAGGTCACAATGAGCGCCGCCGTAAAATTACATATGACTCTCATGGAGAAAATTTGGGCTGAAGAAGCATCAGCATCAATGGCAGCCAAATAACCTACTTTCTGAAGCAACATAAACAAGATGTGGGTTAAGCATGCTCTCTATCTTCTGTCAATTCCCGGATTTCTAAGCAAATTGTTATTTGTGACCTTCAAGTATCTAGCTAATAGTACTTTCATTTCCCTTGTGTAAAGGGAAGGACAAAAAGAATAAGCCGTTGGCACTGTCTGCTAGTATTCGAAAAATGAAATATTTGTAGTATGAATGCATATCCATGTTGACATTCCAACTCACTTTATGAGGTTTTTATTATT
CCTTGACAAAAAGTTAGTGGAGTAACTACCTAGGAGTAAATTCAATAGTAGACCTTGAAAAGAACTTTAGCAAAGTCATCATAAATGCTCTTCACGTCTCATGTACTATGTTAAGGAATGGTCACATTTCTCTCTGCATTAAAGCTAGTTCATGTTAAAAGTTGAGGCCGGTAGTAGTTTCAACTTTCAATTTAATTCCACCTTTCCTGGCCCACTTCTGTACGGAACACCAATCAGAATCTTTAGTTCATCTTAACACCAAAGCATCTCCACTTAGACACTTACTAGACTTCACATAGGAGGAAAAATATGGAACTGGTGGTCCTCACACGTTCTCCTCACAGGGATGGAAACTAACAAATGGGAAGGGAAGAGAAGCATTACTGAAGCTGAAAAGGAAGAGGATGAACATGGAAGTGTTGAAGAGGATAGCAAAAGAAAAAGGGTATTGACTCTCTCTGGTAGGAAGCTAGTTGGTGAAGGGTCGGCACATCCTTCTTGCCAGGTCGATCAGTGCACTGCAGATATGGCAGATGCCAAGCCATACCATCGCCGCCACAAGGTGTGTGAGTTCCATTCAAAGTCTCCAATAGTACTTATTAGTGGACTCCAGAAGCGATTCTGTCAGCAATGTAGCAGATTTCATCTGTTAGCAGAGTTTGATGATGCTAAGAGGAGTTGCCGAAGGCGTTTGGCAGGTCACAATGAGCGCCGCCGTAAAATTACATATGACTCTCATGGAGAAAATTTGGGCTGAAGAAGCATCAGCATCAATGGCAGCCAAATAACCTACTTTCTGAAGCAACATAAACAAGATGTGGGTTAAGCATGCTCTCTATCTTCTGTCAATTCCCGGATTTCTAAGCAAATTGTTATTTGTGACCTTCAAGTATCTAGCTAATAGTACTTTCATTTCCCTTGTGTAAAGGGAAGGACAAAAAGAATAAGCCGTTGGCACTGTCTGCTAGTATTCGAAAAATGAAATATTTGTAGTATGAATGCATATCCATGTTGACATTCCAACTCACTTTATGAGGTTTTTATTATT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc02g077920.2.1 | SL2.50ch02:42743371..42744831 | 137 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc02g077920.2 | SL2.50ch02:42743081..42745257 | 2,177 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc02g077920.2.1.1 | SL2.50ch02:42744927..42745257 | 331 | - | n/a |
exon | exon:Solyc02g077920.2.1.2 | SL2.50ch02:42744539..42744846 | 308 | - | 1 |
exon | exon:Solyc02g077920.2.1.3 | SL2.50ch02:42743081..42743489 | 409 | - | n/a |
intron | intron:Solyc02g077920.2.1.2 | SL2.50ch02:42744847..42744926 | n/a | - | n/a |
intron | intron:Solyc02g077920.2.1.3 | SL2.50ch02:42743490..42744538 | n/a | - | n/a |
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