Solanum lycopersicum mRNA Solyc02g078180.2.1

mRNA details  
Name
Solyc02g078180.2.1
Type
mRNA
Length
2,313
Organism
Solanum lycopersicum
Description
Os11g0198100 protein (Fragment) (AHRD V1 *-*- Q0IU20_ORYSJ); contains Interpro domain(s) IPR006852 Protein of unknown function DUF616
Location(s)
SL2.50ch02:42943947..42950540
GFF source
ITAG_eugene
From BOGAS
1
Length
6594
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g078180.2.1 Os11g0198100 protein (Fragment) (AHRD V1 *-*- Q0IU20_ORYSJ); contains Interpro domain(s) IPR006852 Protein of unknown function DUF616

AGATAAGTATTTTGTTTGAGAAAAGAAGAGGTTATCTAGTTGCTGTGGGAAAAAAACTCAAAATCTCTCTTGTTGCATTCTCACATTGTAGGACACTGCTGCAGTGATTTTGGTGAAGTGGGGTGTCATTATTTGATCGAAATATAGTAAATTGAGGATTGGTTTTGATTCTTGAGATCATTTGGTGAATTGGGTCTCATTTTTCTTGGTGATTTCACTGTATTTTGTGCCAAAAAAGATAAATTTAGTCAAAAGATCCAGACTTTATTAGAAGATTTAACAGTTGGATGTGGATCAGAAGGGAGAGGCGATGAGAGTTGAAGGGCTGAGAGGACAACAATGACTTCTGCGTCATTGGGTCTTCGTTCTTCAGGGAGTTATGGATCATTGCAACAACAGCAATTCCAGAACGGTGGCTCTCCTTTCCAGGCGTCACCCCTTGTTCCACCACGAAAGCCCCCAAAAATGTTCAAGGAGAAAGAAGGATTATTTCTTTGGATCTGCAAATTTGCACCTAGAAAGAAGATTGGGATGATGCTATTATGTGTTGTGTCGGCTGCAGTGTTTTTGTGGGTCTTGTATGTTGGCAAAGGTGAAGATACACAGGAACTTATCATGTCCATGAATAGTGGGGTGTTTCCTCCAGATACTGGACAGATTAGGCATATCGATTTGATAGAGAAAAATGATGTTGAGAAAATTGCATCAATTGAATCTCCTCCACCTCCACCTCCACCTCTTGCATATTTTAAAGGATATACTCTTCCTCCTGGGAATCCATGTGAAGGCTTCACACTGCCACCGCCCCCAGCAGATAAGAAGAGGACTGGACCAAGACCATGTCCAGTATGCTATCTTCCTGTGGAACAAGCTATTGCATTAATGCCAGATGCACCATCCTTTTCTCCCGGAGTTAGCAGTTTGACTTACATCCATGAGGAAAATTTGAGTAGATCTGAGTTTGGAGGTTCAGAATTTGGTGGGTATCCTTCACTGATGCAGAGGAATGATTCATATGATATAAGAGAGTCCATGAGTGTGCACTGCGGATTTGTCAGGGGAGCCAGGCCAGGGCATCAGACAGGTTTTGACATTGATGATTCTAACCTTCTTGCGATGGAATCTTGTCGAGGTGTTGTCGTGGCATCGGCAATATTTGGTGCTTTTGATTTGATTCGGCAACCACAAAATATAAGTGAATATGCTAAAGGGAATGTCTGCTTCTACATGTTTGTGGATGAGGAAACAGAAAGCTTCCTGAGAAATTCGAGTGAACTGGATAGTAGCATGAGAATTGGTTTATGGAGAATCGCTGTTGTTCATAATCTGCCTTATGATGATCCACGACGAAATGGAAAGGTCCCAAAGCTTTTGCTGCACAGGCTTTTCCCAAATGCCCGTTATTCTCTATGGGTTGATGCAAAACTTGAGCTTGTTGTGGATCCATATCAAATACTTGAAAGATTCTTGTGGAGAAAAAATGCAAGCTTTGCAATATCAAGACACTACAGGCGCTATGATGTGTTTGTAGAAGCAGATGTTGACTTCTACAGAAAGGAAGGTCTAACTCCATATACCAGAGCTAAACTTCCTATCTCAAGTGATGTTCCTGAGGGATGTGTAATTATAAAAGAGCATATTCCGATCTCCAATCTCTTTACTTGTCTTTGGTTTAATGAAGTGGACCGCTTTACTCCAAGAGACCAAATTAGCTTTGCCATTGTGAGAGACAAGATCAGGGAAAAGACAAATTGGACTTTGAATATGTTCTTAGACTGTGAACGGCGAAACTTTGTGATTCAGGGTTATCATAGAGATGTTCTTGAGCGCTGGCCTCCCCCACCTGCATCTGGTGCTATTGCGGTTGTTCATCCTCCAGCACCTGTAATTGATGAAACTCTGCCGAATGTTGTTACTAGTCCAGTCAAAAAGATACCTGCGAAGCGTGGGAGAGAAAGGAAATCCAGACGTCATAGAAAAGTTACTCCGGGTTAGTTAAGATGGTAACCTGTTATAATATTAGTATTTATATTTAGGTAATTCTTATTCCTTCCTTCCCTGAAGTCAAGGACACTGATTATGGGGTTAGGAAGGAACTGTGCAAGATGAGGTTTATAGCTCGAGAAAAGGCGGTATTAAAATTTTCCATCGATTCTTTTAGTAGGTGACCAATTTATTATTTTTTGTTGTACATAATTGAGACTCTAAAAATGTTATCAAATATATAGCCCACTATATATCTACTGAACATAAATTCAAGCTTCCTTGTACTTTTTGCCCCTACAACTGAGAAAGAAGAAATTCACTTTTATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g078180.2.1SL2.50ch02:42944285..42950222552+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g078180.2SL2.50ch02:42943947..429505406,594+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g078180.2.1.1SL2.50ch02:42943947..42944538592+n/a
exonexon:Solyc02g078180.2.1.10SL2.50ch02:42950031..42950540510+2
exonexon:Solyc02g078180.2.1.2SL2.50ch02:42945137..42945382246+n/a
exonexon:Solyc02g078180.2.1.3SL2.50ch02:42945507..42945717211+2
exonexon:Solyc02g078180.2.1.4SL2.50ch02:42946030..42946139110+2
exonexon:Solyc02g078180.2.1.5SL2.50ch02:42946229..42946428200+1
exonexon:Solyc02g078180.2.1.6SL2.50ch02:42948307..42948410104+2
exonexon:Solyc02g078180.2.1.7SL2.50ch02:42949170..4294924576+n/a
exonexon:Solyc02g078180.2.1.8SL2.50ch02:42949294..4294935764+1
exonexon:Solyc02g078180.2.1.9SL2.50ch02:42949488..42949687200+n/a
intronintron:Solyc02g078180.2.1.1SL2.50ch02:42944539..42945136n/a+n/a
intronintron:Solyc02g078180.2.1.2SL2.50ch02:42945383..42945506n/a+n/a
intronintron:Solyc02g078180.2.1.3SL2.50ch02:42945718..42946029n/a+n/a
intronintron:Solyc02g078180.2.1.4SL2.50ch02:42946140..42946228n/a+n/a
intronintron:Solyc02g078180.2.1.5SL2.50ch02:42946429..42948306n/a+n/a
intronintron:Solyc02g078180.2.1.6SL2.50ch02:42948411..42949169n/a+n/a
intronintron:Solyc02g078180.2.1.7SL2.50ch02:42949246..42949293n/a+n/a
intronintron:Solyc02g078180.2.1.8SL2.50ch02:42949358..42949487n/a+n/a
intronintron:Solyc02g078180.2.1.9SL2.50ch02:42949688..42950030n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17728525%2Fdetails feature 17728525
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