Solanum lycopersicum mRNA Solyc02g079970.2.1

mRNA details  
Name
Solyc02g079970.2.1
Type
mRNA
Length
1,189
Organism
Solanum lycopersicum
Description
Transcription factor (Fragment) (AHRD V1 **-* D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch02:44342947..44345960
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3014
Nb exon
5
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g079970.2.1 Transcription factor (Fragment) (AHRD V1 **-* D6MKL1_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

CTGACGTCAAAAGTAGGGGAAGTCTCAACTTTTTCACAGTGAAAAACAAAATCTCCCTCCACCACACATATAATTTCCTTCCACTTCTCCTTCTCCTCCTCATTTTCCTCCTTTTTTCCTCTTCCACCTAACACCCAACTGGAATTGGGATACCCTACAATCTTCAACTGAAATTTTCCGGCACCGGTACTCCTCACGTCGGAGAAAATGGCGGAAACAGAGGAAGACGGATCAAATTGGCTCATAGAATTAGGGTTAATGGAAGACCTTCCTTCTCTTGAACCCAATGCTCAATGGCCCTCCAACGCTTTTTCCCTTCCAAATAATCTCAGTTCTGGATTAGAAGATTCCTATGGCAACTCAGATAGTTTGAAGGAATGCGGCTCCAAAAAGAGGGTGAGATCTGGAGCATGTGCATCTGATTCAAAAGCACATAGGGAGAAAATGCGCAGGGACAAGCTGAATGACAGGTTTCAAGAATTAAGTTCTATTCTGGAACCAGGAAAGCAGCCAAAAATGGATAAATCTGTTATCCTAGGTGATGCGGTTCGTATGGTGGTGCAGTTGAGAGATGAAGCTCAGAAGCTGAAAGAGTCGAACAACAACTTGCAGGAGAAGGTTATTGAATTGAAGGCTGAGAAAAATGAACTCCGAGATGAGAAACAAAAGCTAAAAGCAGAGAAAGACAAACTCGAGCAGCATCTGAAGGCCATGAACACTCAACCTGGATTTCTACCACACCCTCCTGCAATGCCTTCCCCTTTCTCAGCCCCACATCAAGTCTTTGCAAGCAAAATGATGCCATATATTGGCTACCCTGGAATCCCTATGTGGCAGTTTGTGCCTCCTGCTGCAGTTGATACCTCAGAAGATCATTCTCTCCGTCCTCCAGTTGCTTAAATTGTGGTGACTTCTTGTTACCAGAATTATGCAAATGTTTGTTTCCTATGTCAACAATTTTGTTGACGTTTGTTGACATTTTGTTCTCCTAATATGAGCAGATTGGTACATATACTATAATGAGGTAGTTGATCAACTGATTATGTACACTAATATGTAAATCTCGTTGAAGTTTACATGAATACCTCCCTTATGTTCTATCATCTAACCAAACATAGCATCCTCAAGACATGCCATTCTTGGTTGTTAAGTTGACTCTACAATTTTTGAATCTGGTTTGCACTCAGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g079970.2.1SL2.50ch02:44343153..44345671231+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g079970.2SL2.50ch02:44342947..443459603,014+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g079970.2.1.1SL2.50ch02:44342947..44343278332+n/a
exonexon:Solyc02g079970.2.1.2SL2.50ch02:44344557..4434461963+n/a
exonexon:Solyc02g079970.2.1.3SL2.50ch02:44344855..4434492975+1
exonexon:Solyc02g079970.2.1.4SL2.50ch02:44345133..44345295163+1
exonexon:Solyc02g079970.2.1.5SL2.50ch02:44345405..44345960556+1
intronintron:Solyc02g079970.2.1.1SL2.50ch02:44343279..44344556n/a+n/a
intronintron:Solyc02g079970.2.1.2SL2.50ch02:44344620..44344854n/a+n/a
intronintron:Solyc02g079970.2.1.3SL2.50ch02:44344930..44345132n/a+n/a
intronintron:Solyc02g079970.2.1.4SL2.50ch02:44345296..44345404n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17730715%2Fdetails feature 17730715
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