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Solanum lycopersicum mRNA Solyc02g080890.2.1

mRNA details  
Name
Solyc02g080890.2.1
Type
mRNA
Length
1,999
Organism
Solanum lycopersicum
Description
Transcription factor WRKY (AHRD V1 ***- C7E5X8_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY
Location(s)
SL2.50ch02:44991244..44993799
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0045449
Length
2556
Nb exon
6
Sifter term
  • GO:0005515
  • GO:0010843
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g080890.2.1 Transcription factor WRKY (AHRD V1 ***- C7E5X8_CAPAN); contains Interpro domain(s) IPR003657 DNA-binding WRKY

ATAGCAGCGTCCATTGCATCTGCTAAAAACTTCTTAGACTCTTCAATTTATCATATTTCTATCTCTACCTTTTGATCTTCCAACTTTTATTTTTTTTATGGACAAAGGATGGGGTCTTACCCTTGAAACTTCTTCTTCTAATTCTGATAGAGCTGGTTTCTTCAAGAACAAGCCTGTTTTTGGTTTTAATTTAAGTCCTAAATTTAACGCTGCTGAAATGTTTTCCTCCTCCGATGAGAAACGTAGCATCGTTAATGAAGTCGACTTTTTCGCCGATAAAAAGCCTATTGTAAAGAAGGAAAATTCTCAGACCGATAATTCTATCAGAACTGATGATCAGTGTGTTGTAAATACTGGTTTGCAACTTGTGATTGCAAACGCGGGAAGTGATCAGTCAACGGTAGATGATGGGGTTTCATCGGAAGTACTTGAGGAGAAACGAGCTAAAATTCAGCAGTTGGCACAATTGCAAGTTGAGCTTGAACGGATGAATTCCGAAAATCAACGTTTAAAAGGGATGCTTACTCAAGTTAGCAACAGTTATTCTGCACTTCAGATGCATCTTGTTACACTCATGCAACAACAACTTAATTCAAGAACTGAAAATACACATCCCCATGAGGTTGTTGGCGCAAATTCTGATGAAGAAAAGAAAAAAGCGAATAATGGGACCATAGTTCCAAGACAATTCATGGAGCTAGGCCCTAGTGGTTCCAAAGTTGACCCAATGGACGAACCATCTCATTCTCGCTCTTCATCGGAAGAAAGAACACTCTCTGGATCACCTCGGAACAACATGGAATTAGTGTCAAGGGATAAGGCAATTAACCGCGAAGAAAGCCCAGAATCTGAGAGTTGGGCTCCAAACAAGGCCCCTAAATTGATGACTTCATCATCAAAGCCTGTTGAACAGTCAACAGAAGCAACCATGAGGAAAGCTCGTGTCTCCGTTCGTGCCCGATCAGAAGCTCCCATGATTAGTGATGGTTGCCAGTGGAGAAAATATGGTCAGAAAATGGCAAAAGGCAATCCATGTCCACGTGCTTATTATCGTTGCACTATGGCTGTTGGTTGTCCAGTCCGAAAACAGGTGCAAAGGTGTGCGGAGGACAGGTCGATCTTAATAACAACATACGAAGGTACACACAACCACCCATTACCACCAGCAGCCATGGCTATGGCATCTACAACATCTGCAGCAGCAAACATGTTGCTCTCTGGTTCCATGCCAAGTGCTGATGGGCTAATGAATACAAATTTCCTAGCAAGAGCAATGCTTCCATGTTCATCAAACATGGCAACTATTTCAGCTTCAGCCCCATTTCCTACTGTCACATTAGACCTCACAGCCCAAAATCCAAACGCAGCATTGCCTAATTATCATCAAAGAATCAACCAAGCAAATCCTCAATTCCAATTCCCTTTACCAGCTGGGCTAAATCACCCGAATTTCGCCGCTTCAATGTCAGCACCACAAATGCCTCACGTTTTGGGGCAGCCTTTGTATAACCAATCGAAATTTTCGGGTTTACAAATTTCTCAGGAAAACATTCATCATCACCACCCATCAATTTCTCATGACACACTCTCCGCCGCCACGGCTGCTATCACCGCCGATCCTAACTTCACCGCCGCCCTTGCGGCTGCCATCTCCTCCATCATCGGTGGTTCTCATCCGAACAACGGCAACAGTCCCATGTCCGGTCCCTCAAGCAATAATAATAACACTAGTAGTTTCCCAGGGAACTAATTAAATAAAATATTATTTTGTTTTGTAAAATTTGCTATTGTAGTCTTTCTTCATTCATTTTTTTAAAAAATTTGTTAGGACATTAGGGGATGAAATTGGAATGAATTTACATGTTCATATCTTTTTTCTTTGTATTATTACCGTGGAGGAAAGAGTATAGGAGAAAAAAAACGTTATTTTCATTCTTTTATTCTGATTTTGGTTATACGAACAAAAATGAATGCAATGTACTATGTGATTGCTTAATTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g080890.2.1SL2.50ch02:44991492..44993702551-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g080890.2SL2.50ch02:44991244..449937992,556-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g080890.2.1.1SL2.50ch02:44993448..44993799352-n/a
exonexon:Solyc02g080890.2.1.2SL2.50ch02:44993232..44993333102-n/a
exonexon:Solyc02g080890.2.1.3SL2.50ch02:44992946..44993113168-n/a
exonexon:Solyc02g080890.2.1.4SL2.50ch02:44992445..44992798354-n/a
exonexon:Solyc02g080890.2.1.5SL2.50ch02:44992239..44992352114-n/a
exonexon:Solyc02g080890.2.1.6SL2.50ch02:44991244..44992152909-n/a
intronintron:Solyc02g080890.2.1.2SL2.50ch02:44993334..44993447n/a-n/a
intronintron:Solyc02g080890.2.1.3SL2.50ch02:44993114..44993231n/a-n/a
intronintron:Solyc02g080890.2.1.4SL2.50ch02:44992799..44992945n/a-n/a
intronintron:Solyc02g080890.2.1.5SL2.50ch02:44992353..44992444n/a-n/a
intronintron:Solyc02g080890.2.1.6SL2.50ch02:44992153..44992238n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17731715%2Fdetails feature 17731715
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