Solanum lycopersicum mRNA Solyc02g082930.2.1
mRNA details
|
| Name | Type |
Length
1,215
|
Organism |
| Description |
|
Location(s)
SL2.50ch02:46554240..46555813
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005975
- GO:0016998
- Length
- 1574
- Sifter term
- GO:0008843
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g082930.2.1 Endochitinase (Chitinase) (AHRD V1 **** Q43184_SOLTU); contains Interpro domain(s) IPR016283 Glycoside hydrolase, family 19 IPR000726 Glycoside hydrolase, family 19, catalytic
ATTTTGTTGAAATCAGTGGAGAAGTGTATGCTCACTTTAAGTTTGATCTCTATAAATACCCACCTACAATTACTAATTCAGTAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTGGTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGGGCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATTATCTCATCGATATTTTAATTTCCCCTTTGTTTACGTAGTTCTTGCATTTACAATTTGCACTAGTATATGAGGGAAGCAATTTTAATAATTCAAGTGGCTACAGGGAGTGTATTTAGAGGGTTAAAAGTGTATTCTTTCTACTGACTTTTAGTAGTAGTTGCACAAAAGGCAGTGAACTTTTGAGT
ATTTTGTTGAAATCAGTGGAGAAGTGTATGCTCACTTTAAGTTTGATCTCTATAAATACCCACCTACAATTACTAATTCAGTAAACACTATCTAATGCATAAGAAAGAACAGAGAGAAGCAAAAAAGAAATGGAGTTTTTGAGATCACAAATGGTATTATGTTGTGTCTTTTTGTTGTTCCTAACGGGAAGCTTTGCACAAGATGTTGGTACAATTGTGACAAGTGACTTGTTCAACGAGATGCTGAAGAATCGAAACGATGATAGATGTCCTGCCAAGGGCTTCTACACTTATGATGCATTCATAGCTGCAGCCAATTCATTTCCAGGTTTTGGTACTACCGGTGATGATACTGCGCGTAAGAAGGAAATTGCTGCCTTTTTCGGTCAAACTTCTCATGAAACTACTGGTGGTAGCCTAAGTGCTGATGGTCCATTTGCCGGAGGATATTGTTTTGTTAGGGAAGGCAATCAAATGGGAAGTGGATTTTATGGCAGAGGACCTATCCAATTGACAGGGCAATCTAACTATGACTTAGCTGGGCAAGCAATTGGACAAGACTTAGTTAACAACCCTGACTTAGTAGCTACAGATGCAACTGTATCTTTTAAAACAGCAATATGGTTCTGGATGACCGCACAAGGCAATAAGCCATCATGCCACGATGTTATCACAGGGCAATGGACGCCATCAGCCGCCGATGCATCAGCAAATAGACAACCAGGCTACGGTGTCATTACAAACATAATTAACGGTGGAATTGAATGTGGCAAAGGACAGAATCCACAAGTGGAGGATCGGATTGGATTCTACAGAAGGTATTGTACGATACTGAATGTTGCTCCCGGGGACAACCTTGATTGCTACGACCAGAGGAACTTTGCTGAGGCCTAGCTTTGTGTTTTAGTCATGATGATGTCTGAATGAATAAGGGATTTTGGATGCCCATTTGGAATATGTAGTTTCTTATTTTGTCTACACAAATAAGAGTTTCTTTTATCTTATAACATAATATACCACATGTACTATTATCTCATCGATATTTTAATTTCCCCTTTGTTTACGTAGTTCTTGCATTTACAATTTGCACTAGTATATGAGGGAAGCAATTTTAATAATTCAAGTGGCTACAGGGAGTGTATTTAGAGGGTTAAAAGTGTATTCTTTCTACTGACTTTTAGTAGTAGTTGCACAAAAGGCAGTGAACTTTTGAGT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g082930.2.1 | SL2.50ch02:46554389..46555492 | 248 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g082930.2 | SL2.50ch02:46554240..46555813 | 1,574 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g082930.2.1.1 | SL2.50ch02:46554240..46554648 | 409 | + | n/a |
| exon | exon:Solyc02g082930.2.1.2 | SL2.50ch02:46554905..46555013 | 109 | + | n/a |
| exon | exon:Solyc02g082930.2.1.3 | SL2.50ch02:46555117..46555813 | 697 | + | 2 |
| intron | intron:Solyc02g082930.2.1.1 | SL2.50ch02:46554649..46554904 | n/a | + | n/a |
| intron | intron:Solyc02g082930.2.1.2 | SL2.50ch02:46555014..46555116 | n/a | + | n/a |
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mRNA details
mRNA details

