Solanum lycopersicum mRNA Solyc02g084630.2.1
mRNA details
|
| Name | Type |
Length
1,091
|
Organism |
|
Description
MADS-box transcription factor (AHRD V1 ***- Q4LEZ4_ASPOF); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
|
|
Location(s)
SL2.50ch02:47713564..47717334
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005634
- Length
- 3771
- Sifter term
- GO:0003677
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g084630.2.1 MADS-box transcription factor (AHRD V1 ***- Q4LEZ4_ASPOF); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
CTTATAGTAGTGCAGTTGCTACCCTTCAATCTTTCTTTTCCCGATATAGTTTCTCTACTAACCCACCCCATATCTCTTCACTTTTTCCTCTCTTTAACTTCAACAATGAACATGACCCTTGTTGATTCACCTCAATTTCTACTTCTTCAAAAATGGGCCGTGGAAAAATTGAGATCAAGAAGATTGAAAACTCGACAAACAGGCAGGTCACTTACTCCAAGAGAAGAAACGGTATTTTCAAGAAAGCTAAAGAACTTACTGTTCTTTGTGACGCTAAGATCTCTCTCATCATGCTATCAAGCACCAGGAAGTATCATGAGTACACAAGCCCAAACACTACGACAAAAAAGATGATTGATCAGTATCAGAGTGCACTTGGAGTTGATATCTGGAGCATTCACTACGAGAAAATGCAAGAAAACTTGAAGAGATTGAAAGAGATCAATAACAAGCTAAGAAGAGAGATAAGGCAGAGAACAGGGGAAGACATGAGCGGACTAAATTTGCAGGAACTATGTCACTTGCAGGAGAACATCACTGAATCTGTTGCTGAGATTCGTGAACGAAAGTACCACGTGATCAAGAATCAAACAGACACCTGCAAGAAGAAGGCGAGGAACTTAGAAGAGCAAAATGGAAACCTTGTACTTGACTTGGAAGCAAAATGTGAAGATCCAAAGTATGGTGTTGTGGAAAATGAGGGGCATTACCACTCTGCTGTGGCATTTGCGAATGGAGTACACAATCTTTATGCTTTTCGCCTACAACCATTGCACCCCAATCTTCAAAACGAAGGAGGATTTGGTTCTCGTGATCTACGTCTCTCCTGAAGATATCAGTTCACAGTAATGGCGTTAAACATTAATGCTGAGTTACTTATTCAAATCAACTTCCCGAATTATATCTTATTCCTAAAAAAAATTAAATATTGCAAGCTGCAAACACTACTTTATCTAACTAATTTGCTCCGAGTCTGGATTTGGTTCTGTGTTAAGCACTCTATTATTCTAGGTGTTTCAACTCCTTTCTATATATGAATTATGATGCCTTGAACGCATGTTCAATTAATCAATTTTCCTTTTCGACTTGAT
CTTATAGTAGTGCAGTTGCTACCCTTCAATCTTTCTTTTCCCGATATAGTTTCTCTACTAACCCACCCCATATCTCTTCACTTTTTCCTCTCTTTAACTTCAACAATGAACATGACCCTTGTTGATTCACCTCAATTTCTACTTCTTCAAAAATGGGCCGTGGAAAAATTGAGATCAAGAAGATTGAAAACTCGACAAACAGGCAGGTCACTTACTCCAAGAGAAGAAACGGTATTTTCAAGAAAGCTAAAGAACTTACTGTTCTTTGTGACGCTAAGATCTCTCTCATCATGCTATCAAGCACCAGGAAGTATCATGAGTACACAAGCCCAAACACTACGACAAAAAAGATGATTGATCAGTATCAGAGTGCACTTGGAGTTGATATCTGGAGCATTCACTACGAGAAAATGCAAGAAAACTTGAAGAGATTGAAAGAGATCAATAACAAGCTAAGAAGAGAGATAAGGCAGAGAACAGGGGAAGACATGAGCGGACTAAATTTGCAGGAACTATGTCACTTGCAGGAGAACATCACTGAATCTGTTGCTGAGATTCGTGAACGAAAGTACCACGTGATCAAGAATCAAACAGACACCTGCAAGAAGAAGGCGAGGAACTTAGAAGAGCAAAATGGAAACCTTGTACTTGACTTGGAAGCAAAATGTGAAGATCCAAAGTATGGTGTTGTGGAAAATGAGGGGCATTACCACTCTGCTGTGGCATTTGCGAATGGAGTACACAATCTTTATGCTTTTCGCCTACAACCATTGCACCCCAATCTTCAAAACGAAGGAGGATTTGGTTCTCGTGATCTACGTCTCTCCTGAAGATATCAGTTCACAGTAATGGCGTTAAACATTAATGCTGAGTTACTTATTCAAATCAACTTCCCGAATTATATCTTATTCCTAAAAAAAATTAAATATTGCAAGCTGCAAACACTACTTTATCTAACTAATTTGCTCCGAGTCTGGATTTGGTTCTGTGTTAAGCACTCTATTATTCTAGGTGTTTCAACTCCTTTCTATATATGAATTATGATGCCTTGAACGCATGTTCAATTAATCAATTTTCCTTTTCGACTTGAT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g084630.2.1 | SL2.50ch02:47713824..47717182 | 226 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g084630.2 | SL2.50ch02:47713564..47717334 | 3,771 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g084630.2.1.1 | SL2.50ch02:47716995..47717334 | 340 | - | 1 |
| exon | exon:Solyc02g084630.2.1.2 | SL2.50ch02:47716853..47716919 | 67 | - | n/a |
| exon | exon:Solyc02g084630.2.1.3 | SL2.50ch02:47716713..47716774 | 62 | - | 1 |
| exon | exon:Solyc02g084630.2.1.4 | SL2.50ch02:47716286..47716385 | 100 | - | n/a |
| exon | exon:Solyc02g084630.2.1.5 | SL2.50ch02:47714252..47714293 | 42 | - | n/a |
| exon | exon:Solyc02g084630.2.1.6 | SL2.50ch02:47714106..47714150 | 45 | - | n/a |
| exon | exon:Solyc02g084630.2.1.7 | SL2.50ch02:47713564..47713998 | 435 | - | n/a |
| intron | intron:Solyc02g084630.2.1.2 | SL2.50ch02:47716920..47716994 | n/a | - | n/a |
| intron | intron:Solyc02g084630.2.1.3 | SL2.50ch02:47716775..47716852 | n/a | - | n/a |
| intron | intron:Solyc02g084630.2.1.4 | SL2.50ch02:47716386..47716712 | n/a | - | n/a |
| intron | intron:Solyc02g084630.2.1.5 | SL2.50ch02:47714294..47716285 | n/a | - | n/a |
| intron | intron:Solyc02g084630.2.1.6 | SL2.50ch02:47714151..47714251 | n/a | - | n/a |
| intron | intron:Solyc02g084630.2.1.7 | SL2.50ch02:47713999..47714105 | n/a | - | n/a |
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mRNA details
mRNA details

