Solanum lycopersicum mRNA Solyc02g086680.2.1

mRNA details  
Name
Solyc02g086680.2.1
Type
mRNA
Length
1,215
Organism
Solanum lycopersicum
Description
Peptide deformylase-like (AHRD V1 **** Q5VNP3_ORYSJ); contains Interpro domain(s) IPR000181 Formylmethionine deformylase
Location(s)
SL2.50ch02:49328459..49331889
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006412
Length
3431
Nb exon
7
Sifter term
  • GO:0005515
  • GO:0008463
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g086680.2.1 Peptide deformylase-like (AHRD V1 **** Q5VNP3_ORYSJ); contains Interpro domain(s) IPR000181 Formylmethionine deformylase

TGTAACAATACACGAAGGACAAAATTAGTAATATTTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTCCTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAAACTGATGGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAACTAATGGTATTTAATGCAGCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAATCCACGTGTCAGTAGATATTCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTTCCAATGATACATGGTGATGTTAAGAGACCAGAGTCAGTTAAGGTTGACGCACAGGACATTAATGGTACAAGGTTTGAGATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAATTTGATCACCTACAGGGAGTTCTTTTCTTTGACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTGGCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g086680.2.1SL2.50ch02:49328835..49331812280-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g086680.2SL2.50ch02:49328459..493318893,431-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g086680.2.1.1SL2.50ch02:49331581..49331889309-2
exonexon:Solyc02g086680.2.1.2SL2.50ch02:49331348..49331486139-1
exonexon:Solyc02g086680.2.1.3SL2.50ch02:49330665..49330857193-n/a
exonexon:Solyc02g086680.2.1.4SL2.50ch02:49329518..49329628111-n/a
exonexon:Solyc02g086680.2.1.5SL2.50ch02:49329027..4932908963-n/a
exonexon:Solyc02g086680.2.1.6SL2.50ch02:49328807..49328937131-n/a
exonexon:Solyc02g086680.2.1.7SL2.50ch02:49328459..49328727269-n/a
intronintron:Solyc02g086680.2.1.2SL2.50ch02:49331487..49331580n/a-n/a
intronintron:Solyc02g086680.2.1.3SL2.50ch02:49330858..49331347n/a-n/a
intronintron:Solyc02g086680.2.1.4SL2.50ch02:49329629..49330664n/a-n/a
intronintron:Solyc02g086680.2.1.5SL2.50ch02:49329090..49329517n/a-n/a
intronintron:Solyc02g086680.2.1.6SL2.50ch02:49328938..49329026n/a-n/a
intronintron:Solyc02g086680.2.1.7SL2.50ch02:49328728..49328806n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17738793%2Fdetails feature 17738793
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