Solanum lycopersicum mRNA Solyc02g086860.2.1
mRNA details
|
| Name | Type |
Length
1,484
|
Organism |
| Description |
|
Location(s)
SL2.50ch02:49463140..49466729
|
|
GFF source
ITAG_eugene
|
- Length
- 3590
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc02g086860.2.1 UPF0497 membrane protein At2g36330 (AHRD V1 *-*- U497A_ARATH); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
AGCTTTCACAAATTCAGACGTGGAAGACGAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAGAGAGGAAAGCCACAGTTGTCGATTTTAAGAAAAGTGAGGAGGGATGCAATGGTAAAGAAAGCGGGTTTAGGTTTTAGGATTTTTGGGTTTTTGTCTTGTTTGGTTTCATTTTCTGTTATGGCAGCTGATAGGAATAAGGGTTGGGCTCTGGATTCTTTTGAACGTTACAAGGAGTTCAGGTACTGTATGTCAGTGAATGTCATTGGATTTGTGTATTCAGCAGCTCAGGCATTCGATTTAGCCTACCAATCTGCCACCGGCAAGAACATCGTGCAACATCATTTGCGCTACATGTTTGATTTTGCCCTAGATCAGGTGGTAACATATCTTCTGATATCAGCATCATCTTCTGCTGCCACTCGCATTGATGATTGGCAGTCCAATTGGGGCAAGGACAAATTTCCTGATATGGCAAGCGCCTCTGTAGCATTGTCCTTCCTTTCATTTGCGGCTTTGGCCTTCAGCTCACTCATATCTGGCTATGTACTATGCAATTCCAGATCAACGTAGTAACGGTCCATGTTTGAGTCTATTTGTTTCTCATCCTTTAAAGTTTGACATAATTGTATGATGTGAAAAATCAGTTGCAGGTTGTTCAGGTGAAACTAAGGTTTCTTGAGTTAATTATGTTGTAATGCTCCTTGAACAAAGCTTTAGGATGATATTATATATGTGTCTTGTTAGTGAGATATCTAATTATGAGAAT
AGCTTTCACAAATTCAGACGTGGAAGACGAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAGAGAGGAAAGCCACAGTTGTCGATTTTAAGAAAAGTGAGGAGGGATGCAATGGTAAAGAAAGCGGGTTTAGGTTTTAGGATTTTTGGGTTTTTGTCTTGTTTGGTTTCATTTTCTGTTATGGCAGCTGATAGGAATAAGGGTTGGGCTCTGGATTCTTTTGAACGTTACAAGGAGTTCAGGTACTGTATGTCAGTGAATGTCATTGGATTTGTGTATTCAGCAGCTCAGGCATTCGATTTAGCCTACCAATCTGCCACCGGCAAGAACATCGTGCAACATCATTTGCGCTACATGTTTGATTTTGCCCTAGATCAGGTGGTAACATATCTTCTGATATCAGCATCATCTTCTGCTGCCACTCGCATTGATGATTGGCAGTCCAATTGGGGCAAGGACAAATTTCCTGATATGGCAAGCGCCTCTGTAGCATTGTCCTTCCTTTCATTTGCGGCTTTGGCCTTCAGCTCACTCATATCTGGCTATGTACTATGCAATTCCAGATCAACGTAGTAACGGTCCATGTTTGAGTCTATTTGTTTCTCATCCTTTAAAGTTTGACATAATTGTATGATGTGAAAAATCAGTTGCAGGTTGTTCAGGTGAAACTAAGGTTTCTTGAGTTAATTATGTTGTAATGCTCCTTGAACAAAGCTTTAGGATGATATTATATATGTGTCTTGTTAGTGAGATATCTAATTATGAGAAT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc02g086860.2.1 | SL2.50ch02:49463335..49466563 | 374 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc02g086860.2 | SL2.50ch02:49463140..49466729 | 3,590 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc02g086860.2.1.1 | SL2.50ch02:49465773..49466729 | 957 | - | 1 |
| exon | exon:Solyc02g086860.2.1.2 | SL2.50ch02:49465501..49465636 | 136 | - | n/a |
| exon | exon:Solyc02g086860.2.1.3 | SL2.50ch02:49463140..49463530 | 391 | - | n/a |
| intron | intron:Solyc02g086860.2.1.2 | SL2.50ch02:49465637..49465772 | n/a | - | n/a |
| intron | intron:Solyc02g086860.2.1.3 | SL2.50ch02:49463531..49465500 | n/a | - | n/a |
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mRNA details
mRNA details

