Sol Genomics Network

Solanum lycopersicum gene Solyc02g087770.2

Name Solyc02g087770.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc02g087770	Length 2,674

Description

Aldose-1-epimerase-like protein (AHRD V1 **** O48971_TOBAC); contains Interpro domain(s) IPR015443 Aldose-1-epimerase

Location(s)

SL2.50ch02:50074427..50077100

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2674

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc02g087770.2.1	SL2.50ch02:50074427..50077100	1,556	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc02g087770.2 SL2.50ch02:50074427..50077100
ACAAAACATAAACGTTGCCTCTGTGTAGATCCAAGACTACACACACATCATTATCTTGCTGACAAAGTCTTCTTTTGTGCACATGTATATCTAGAAGATACCATATCTTCTTTCTCTCACACACACACACTCTGAGAGTTGCTTAACTATGTCTCTCAAGATTAATCTGTTGATCTGTTTCTTCATTCTTCATCTATGGGCTGCTACAGGACACAAGATAGGAATTTATGAGATCAAGAAAGGAGATTTCTCTGTTAAGGTCACTAATTATGGTGCCAGAATCATCTCTGTTCTTCTTCCTGATAAGAATGGTATGTGATTCAAGATTTTAGTTTGATGAGTTATATTTTCATGATTCTTTCTTCTTAACTGCACTATTTGATACTTGTCTTGTTCCTTTCCAGGAAAAATAGGTGATATTGTTCTTGGATATGACACCATTGGGGAATACGTGGTTAGTTTCACTTTCTTCTTTTCTAATAACTTCTTATTATTCATCAACAGTTGTTTGTTTGACGCATATCATTTGTCGGATTAACAACTCTTTCTTTGATACACTGTCCAATTGTACTTCTTTACCAAAAAGACCGTGTTTTTGCCTGTAGTATGTAACCTAAATTCCCATGTTTTCTTGGGGACTAATGTGCAGAAATTTAGACTGGAGAATGTGGAGATAGATGATTCTCTAACGTTTGAACATCAGATTATGGTGAATTGTAATAACTTGTCTTGTTTCTTTTCTGAAACAAAAACTTGTGCCTAGTATACACGAAGTTTGAGAACTATGATTCTGCTGTCCCTATGTCATCTTAGTGCATATTACACTAAAAAGTATGCTTAGCCAAGCTGGCCGGCACTATGAACATTCACAATGGGGGTGGACCATCATTGGACATAATTATGCCTCTTTCATCATTTGAGCCTTTAAGTAACATGCCTTATTTATGTGTTTAACTTAGCACTACACCATATTTTGGTTAGACAAAGACATCCAAAAGGATTTATGATTTTCGGATACTCCACCTAATGCATTAAATTGACATAAAAATCAACATGTTTCACATGTGCCTCAATAATGTCATATTCTAAGTTAGTAGAGGGGCATAAAGAATGTCAAATTTCAAAATTCTTTCCGAGAATTCAATGGATGAGAATATGGAATCAGTCCCTTGCTACTCTACAAATCGATATAGGAATAAACAAATGTGAAAAAACTTTCGTTGCAGAACGATACGAGTTCCTTTGGAGCTATTGTTGGAAGAGTTGTTAACCGGATTGCTGGTGCTCGATTTACTCTAAATGGAACCCTTTATAAGCTTATCGCCAATGATGGCAAGAACACAATACACGGTATCCTCACTAGATTTTCTTTCTCTTCCCATTTCACTTCCATAATACCCAAATTTCCTTCCTCTTATGTAAAAACTTGAAAAATGTAGGTGGCCCTAAAGGATTTAGCCATGTTGTTTGGAAGGTGAGCAAGTACAAGAAAGATGGTCCTCATCCTCACATTACTTTAACCTACCACAGTACTGATGGTGAACAAGGTGAATGGATCTGCTTAGTTAATGGTTATTCCGCAAGACAATTACAGTCTTCTTTATTTTCTTAAACTTTGTACCAAGTCAAAACTAGACAAGCAAATTGAAACGGGTGGAGTCCTTTCGAAGAACATTCTGAATTGAATAAAATCCATTGTTTTCTCTTGTAGGATTTCCTGGTGATCTTCTTGCCTCTGTTACCTATGCATTGGAAGACCCTTACAAGCTTAGTGTGGTAATGAAAGCAAAAGCTCTAAACAAGGCCACTCCAGTTAACTTGGCTCAACATACTTATTGGAACCTTGGTGGACACAACAGTGGCGATGTTTTGTCCAACGATATTCAAATCTTTGCTTCACACATCACCCCATTAGATCAACATTTCATTCCAACAGGAAAAATCGCCCCTGTCAAGAACACGCCCTATGATTTCCTTAAACCCCGTAAAATTGGGAGCCAGTTCAAGAAACTCCAAAATGGATATGACATAAACTATCCACTAGACAGCACTGAAAAACTGAAGCCCACGGCAACAGTTCACGATAATAAGTCAGGAAGAGTGATGAGTTTACAAACGACTGCACCTGCTGTCCAATTATACACTGCAAACACCCTTGTAAAGAAAGGGAAAGGTGGATTTGTCTATCAGCCTTATTCAGCCGTGTGTTTGGAGACTCAAGGATTCCCTGATGCTGTGAATCACCCAAATTTCCCATCAACAATTGTGACTCCGGAACATCCCTACTTTCACAAAATGCTGTTTACGTTCTCAATTAAGAAATATTAGAATGCTATTTGTTCTATCAAGGTTACATGTCCTCTGTGAGTTGTGACAAATAAACACCTGCCATTCTGATTCAATACAGTTGTGCTAGGCTGGAGTTCCCTAAGAACTGTTTTCAAACATGTTTGGTGACTGTTTGCATGTGGACTCATTGTTTTTGGAGTGAGAATTTTGTTTTTTTCTTCTAAGTTGCTAACTCTCCAAAATTGTTATTTCACCTGTGTCGGATTCTTCAAAATGCTGTACTTTTGCAGTATCCGATACACATCCGTTTGACACTTTTGAAGAGTCTGAGCATCAGTTTTCTCAGAACAAATAAAAGTTTGTACCTCTATTGTTTCTGGTTTTT

Download sequence region

Download sequence (2.7Kb)

Get flanking sequences on SL2.50ch02

mRNA Solyc02g087770.2.1

Ontology terms

terms associated with this mRNA

GO:0005515 – protein binding
GO:0004034 – aldose 1-epimerase activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc02g087770.2.1	SL2.50ch02:50074574..50076754	354	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc02g087770.2	SL2.50ch02:50074427..50077100	2,674	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc02g087770.2.1.1	SL2.50ch02:50074427..50074737	311	+	n/a
exon	exon:Solyc02g087770.2.1.2	SL2.50ch02:50074831..50074880	50	+	n/a
exon	exon:Solyc02g087770.2.1.3	SL2.50ch02:50075653..50075776	124	+	2
exon	exon:Solyc02g087770.2.1.4	SL2.50ch02:50075866..50075973	108	+	n/a
exon	exon:Solyc02g087770.2.1.5	SL2.50ch02:50076138..50077100	963	+	2
intron	intron:Solyc02g087770.2.1.1	SL2.50ch02:50074738..50074830	n/a	+	n/a
intron	intron:Solyc02g087770.2.1.2	SL2.50ch02:50074881..50075652	n/a	+	n/a
intron	intron:Solyc02g087770.2.1.3	SL2.50ch02:50075777..50075865	n/a	+	n/a
intron	intron:Solyc02g087770.2.1.4	SL2.50ch02:50075974..50076137	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc02g087770

http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17740073%2Fdetails feature 17740073

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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