Solanum lycopersicum mRNA Solyc02g088100.2.1

mRNA details  
Name
Solyc02g088100.2.1
Type
mRNA
Length
1,184
Organism
Solanum lycopersicum
Description
Expansin (AHRD V1 ***- Q9ZP31_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal
Location(s)
SL2.50ch02:50289599..50291065
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005576
  • GO:0009664
Length
1467
Nb exon
4
Sifter term
GO:0005199
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g088100.2.1 Expansin (AHRD V1 ***- Q9ZP31_SOLLC); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like IPR007117 Pollen allergen/expansin, C-terminal

TCCTCTATTTATTCTCCACGATTGCTGATATCTTCATTTCCTAACTATACCCTCGTTCCTCAAGCAAACACATAGAAACTTTATTTTTTTGTTCAAAAATGGCTCTTTTAGCTATCCTTTTAATGGGAATTTCCCTCATGTTTCAATCAGCCCATGGCTATGGTGGTTGGATCAATGCACATGCCACTTTTTACGGTGGAGGAGATGCTTCTGGAACTATGGGTGGTGCTTGTGGTTACGGAAATTTATACAGCACGGGATACGGAACGAACACTGCTGCGTTGAGTACTGCTCTGTTCAACAACGGGTTGAGCTGTGGAGCGTGTTTTCAGCTAATGTGTGTGAATGCGGGGCAGTACTGCCTGCCAGGCATAATTACGGTAACAGCCACCAATTTCTGTCCACCAGGAGGATGGTGTGATCCTCCACGCCCTCATTTTGATCTCTCTCAACCTATCTTCTTGCGCATTGCTCAATATAGAGCTGGCATAGTTCCTGTTGCCTATAGAAGGGTACCCTGCAGAAGAAGCGGAGGAATTAGATTTACAATCAATGGCCACTCTTACTTCAACTTGGTTCTTGTAACAAATGTTGGAGGTTCAGGGGATGTACATTCAGTATACATAAAGGGTTCAAGAACTCAATGGCAACCAATGTCAAGAAATTGGGGCCAAAATTGGCAGAATAACGCTTACCTTAACGGCCAAAGCTTGTCCTTTAAGGTCACTACAGGCGATGGTCGCACTGTTGTTTCATACAATGCAGCTCCTAGTTCTTGGTCATTTGGTCAGACATTTTCTGGAGGACAATTCCGTTAAAACGCAACATATTCTTTAAGAAAAAAAAATCAGAATTTTCAAAGTATACTACTTGCTAATATATTATTCTAAGAGTTTTGCCTTAAATTTGAGGGTTTTACTCACCAAAATATTTGGGGAAAAGCGCAGTTTGGCACTTTTTGTCCATTGTAAAATTGGTCATTCAATTGTGGAAGTAAAAAGAATTGATTTGGCCTACTCTTTTTTGGGTGGTTATTAACGTTTAGGGGGCGGCAGTTGTGAGCTTTTACTGCTCAATTTAATAGTATAAATAGCATTTACGGTATTGTGTGCATAGAAGAAAAATATCTATTTTTTTTTTTTACTGCAAAAGAGCTAAGCACTAATTATGGTGAGTATGTATGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g088100.2.1SL2.50ch02:50289964..50290879240-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g088100.2SL2.50ch02:50289599..502910651,467-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g088100.2.1.1SL2.50ch02:50290976..5029106590-n/a
exonexon:Solyc02g088100.2.1.2SL2.50ch02:50290756..50290887132-2
exonexon:Solyc02g088100.2.1.3SL2.50ch02:50290390..50290678289-1
exonexon:Solyc02g088100.2.1.4SL2.50ch02:50289599..50290271673-n/a
intronintron:Solyc02g088100.2.1.2SL2.50ch02:50290888..50290975n/a-n/a
intronintron:Solyc02g088100.2.1.3SL2.50ch02:50290679..50290755n/a-n/a
intronintron:Solyc02g088100.2.1.4SL2.50ch02:50290272..50290389n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17740407%2Fdetails feature 17740407
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