Solanum lycopersicum mRNA Solyc02g090480.2.1

mRNA details  
Name
Solyc02g090480.2.1
Type
mRNA
Length
1,579
Organism
Solanum lycopersicum
Description
Peptidyl-prolyl cis-trans isomerase D (AHRD V1 **** PPID_RAT); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Location(s)
SL2.50ch02:52010862..52016473
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005488
  • GO:0006457
Length
5612
Nb exon
9
Sifter term
GO:0003755
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g090480.2.1 Peptidyl-prolyl cis-trans isomerase D (AHRD V1 **** PPID_RAT); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type

ATGGCGAATCCGAGATGCTATTTGGACATTAGCCTTGGTGGAGAGCTTGAAGGAAGAATGGTGATTGAGCTTTACAAAGACATCGTTCCTAAAACCGTTGAAAATTTCAGGGCTCTTTGTACTGGTGAGAAAGGCATTGGCCCCAACACCGGTGTCCCCCTCCATTTCAAGGGTTCTTGTTTTCATCATGTCATCAGAGGCTTTATGTTACAAGGCGGGGACATTTCTACTGGAAACGGCAGTGGTGGGGAGTCAATTTATGGCTTGACATTTGAAGATGAAAATTTCAAACTCAAACATGAAAGAAAAGGAATGCTTTCTATGGCTAATTCTGGTCCAAATACAAACGGGTCTCAATTTTTCATCACCGCTTCTCAAACACATGTTCTAGATGGAAAGAATGTTGTATTTGGACGAGTAATCAGGGGTTTGGGGATGATTCGTGTAATTGAACATATTAAAACAAGTGAAAATGGTTTTCCTGATCTTCCTGTGATAATAGAGGACTGTGGAGAAATTCCAGAGGGTGCAGATGATGGCACAATTAACTTCTTTAAAGATGGTGATACTTACCCTGATTGGCCAATAGACCTTGACGTGAAACCAGATGAGGTTGCTTGGTGGATAAATGTTGTTGAACGTATCAAAGCCTTTGGCAATGAACATTTCAAGAAGGAAGACTATAAGATGGCTATCAGGAAGTACAGGAAGGCTGTCCGTTATACCGACTTATGCTGGGAAAAGGACGACATTGATGAAGTAAAAAGCGAGTATTTGAGGAAGACAAAGTCCCAGATACTTGCAAATAGTTCTGCCTGTAAACTGAAGATAGGAGATCTAACTGGAGCATTGATAGATGCGAATGATGCAATTTATGATGGAGAAGACAATGTCAAAGCTTTTTACCGCCAAGGCCAGGTATATATGGCAATGAATGCTATAGATGCAGCAGCTGAAAGTTTTAAGAAGGCCCTGGAGTTAGAGCCAAACAATGGGGGGATAAAGAAGGAGCTGGCTGCTGCAATGAAGAAGATTGCTTATAAACTAGAGAAGGAGAAGAAGGGTTATTTCACAATAGAAGTATAGTGGTTCAGGTTAACTTTTGGGCCTCAAAACAGCTAGAATCAGGTATTTTGCGCCCACGTCATCTTCTCTCTCTATTTTAGCCTGTCAGATCAATCTGTTATGTCTTATCTTGTAGGAGTAAGAGAAACTTTGGTAGTTTGGTACATCAATTTCTTGTATATCCTTCCATCTCATTGATCCTTTTTTTCCTTTCTACATTTTGAGTTCTTGCAGGATTTGTTACTCATGGAGTACAAAAACGAAGGGTTTGTTCTCAACTTCTCATAGAGTACAAAAACTAACTGCGGTTATCAAAGTTTGAGCCGATTTCTCACTTGACTTTAATTCTGCTTATTAGTGGGCATTCTTCTGTTGAATACAAAATATATAGCCTGAATATACCTCAACGTGTTTTGTACAGAAAGTGAAAGGGAACTTAATGCAGGATAAAGTGTCTTTCCATTTATAATATAATGATATGGATGCCCCAAACTCGGTTATCTATGGCTTCCGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g090480.2.1SL2.50ch02:52010861..52015980362+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g090480.2SL2.50ch02:52010862..520164735,612+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g090480.2.1.1SL2.50ch02:52010862..52011032171+n/a
exonexon:Solyc02g090480.2.1.2SL2.50ch02:52011892..52012392501+n/a
exonexon:Solyc02g090480.2.1.3SL2.50ch02:52012678..5201276588+n/a
exonexon:Solyc02g090480.2.1.4SL2.50ch02:52012860..5201291253+2
exonexon:Solyc02g090480.2.1.5SL2.50ch02:52013879..52013983105+n/a
exonexon:Solyc02g090480.2.1.6SL2.50ch02:52014942..5201501776+n/a
exonexon:Solyc02g090480.2.1.7SL2.50ch02:52015594..5201563138+2
exonexon:Solyc02g090480.2.1.8SL2.50ch02:52015774..5201580936+n/a
exonexon:Solyc02g090480.2.1.9SL2.50ch02:52015963..52016473511+n/a
intronintron:Solyc02g090480.2.1.1SL2.50ch02:52011033..52011891n/a+n/a
intronintron:Solyc02g090480.2.1.2SL2.50ch02:52012393..52012677n/a+n/a
intronintron:Solyc02g090480.2.1.3SL2.50ch02:52012766..52012859n/a+n/a
intronintron:Solyc02g090480.2.1.4SL2.50ch02:52012913..52013878n/a+n/a
intronintron:Solyc02g090480.2.1.5SL2.50ch02:52013984..52014941n/a+n/a
intronintron:Solyc02g090480.2.1.6SL2.50ch02:52015018..52015593n/a+n/a
intronintron:Solyc02g090480.2.1.7SL2.50ch02:52015632..52015773n/a+n/a
intronintron:Solyc02g090480.2.1.8SL2.50ch02:52015810..52015962n/a+n/a
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