Solanum lycopersicum mRNA Solyc02g093280.2.1

mRNA details  
Name
Solyc02g093280.2.1
Type
mRNA
Length
1,402
Organism
Solanum lycopersicum
Description
Transcription factor EB (AHRD V1 *-*- TFEB_HUMAN); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch02:54189626..54191963
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2338
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g093280.2.1 Transcription factor EB (AHRD V1 *-*- TFEB_HUMAN); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ACTCGTTCGGAGCATATACCCAAAAAATGTCACCTACTCCTACATGTAAAACAGTGTGAACGTAGACAAAATTAACTTGATCTGCTCAACACTGAACTTGATTTTGCTGGACTATAATGGCCAACAACAATGTTTATTATCACAATGCTAATTTTTCTTTGACTGATCCTGATCCTGAACCAGATGATATTTCTGTGTTTCTTCGTCATATTCTACTTCCTTCTTCGTCTTCGTCTTCATCTTCATCTAATTTTATGGCCCTGAAGAGTAATGAAATGCAATATTCCTCATCATTACCTCATCTTATGCCTAATAATAATCAACAGGGTAATTTGTCATCCATGATGAATTCATCAGCTTGCGGCATTTTCTCGTCTTCCTATGGGGTTTGTAATGGTGCAACTACTGTTTCTTCCTCATCTGTTGGGACCATAGATTACGATCCGGATGAGTATGAATGTGAAAGTGAGGATGGTACAGAGGATTTGGGGGCGGAAGCTTCAGTTCAACCGCCATCTCGTAACACTTCCAAGAGAAGCAGAGCAGCTGAAGTGCACAATTTGTCTGAAAAGAGGAGAAGAAGCAGGATTAATGAGAAGATGAAAGCATTGCAAAAACTTATTCCAAATTCAAATAAGACTGACAAGGCTTCAATGCTTGATGAAGCCATTGAGTATCTTAAGCAGCTTCAGCTCCAAGTACAGATGTTGACAATGAGAAACGGGTTAAACATGTATCCTCTTGGCCTGCCACGAATGCTACAACAAAATCAACTCTCCCATCAAAAAGTAGGTTTGTGCGAGGGGAATGCATTCACAAATGCCAAAGTGGCTGGGAATCTACAAGTTAACCAAGACGCCTCGTTAAATGCTATTTTCAACCCAACTGAAAATTGTACAGAAACTAAGGTAACACCACCGATAACTATGTCAAATATAAACCGGTCAGACAGTGCGTTTGAGCTTGAGTCATCGATGAATATTCACCTTGATCCCTTTCAGCTCTCAAGATCTACCAGCAAGGAAATTTGGAGGGAGGATGACTTACCTTTATATGGTATGAATGAGCTAACGACCAAAACTGCATCAACTGGATCAAATCTGGCATTCTCAGTTCCCCTAGATACGGATGCATCTAACCTGAAGAGAAGCACTCGGGAGGCCTGCTTGCTTCGATATCAGTTTGGTGCTGTGAATGAAACCAATCTGGATTGTGACCAACTTCTTTCCCAACAACTGTATAGCAACTTCTGAATTTTGGCCTGCATCGCCTTGCTGGATTTTGTTGAAGTAATGAGACATGCATTTTGCTGCTTAGGACGTTTAATGTTGTTAACTTTTGGGCTCACTAGCCACTGTAATGAATGAATGGAATATAAATGAAAAGATTGGACTAGTTTCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g093280.2.1SL2.50ch02:54189741..54191814379+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g093280.2SL2.50ch02:54189626..541919632,338+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g093280.2.1.1SL2.50ch02:54189626..54190095470+n/a
exonexon:Solyc02g093280.2.1.2SL2.50ch02:54190230..54190331102+n/a
exonexon:Solyc02g093280.2.1.3SL2.50ch02:54190415..5419048066+n/a
exonexon:Solyc02g093280.2.1.4SL2.50ch02:54190605..5419067066+n/a
exonexon:Solyc02g093280.2.1.5SL2.50ch02:54190948..54191265318+n/a
exonexon:Solyc02g093280.2.1.6SL2.50ch02:54191377..5419144670+n/a
exonexon:Solyc02g093280.2.1.7SL2.50ch02:54191537..54191687151+n/a
exonexon:Solyc02g093280.2.1.8SL2.50ch02:54191805..54191963159+2
intronintron:Solyc02g093280.2.1.1SL2.50ch02:54190096..54190229n/a+n/a
intronintron:Solyc02g093280.2.1.2SL2.50ch02:54190332..54190414n/a+n/a
intronintron:Solyc02g093280.2.1.3SL2.50ch02:54190481..54190604n/a+n/a
intronintron:Solyc02g093280.2.1.4SL2.50ch02:54190671..54190947n/a+n/a
intronintron:Solyc02g093280.2.1.5SL2.50ch02:54191266..54191376n/a+n/a
intronintron:Solyc02g093280.2.1.6SL2.50ch02:54191447..54191536n/a+n/a
intronintron:Solyc02g093280.2.1.7SL2.50ch02:54191688..54191804n/a+n/a
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Related viewsNone found
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