Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

Solanum lycopersicum mRNA Solyc02g094060.2.1

mRNA details  
Name
Solyc02g094060.2.1
Type
mRNA
Length
4,329
Organism
Solanum lycopersicum
Description
Voltage-gated chloride channel (AHRD V1 **** Q96325_ARATH); contains Interpro domain(s) IPR002251 Chloride channel plant CLC
Location(s)
SL2.50ch02:54691660..54696643
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0055085
Length
4984
Nb exon
6
Sifter term
GO:0005247
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc02g094060.2.1 Voltage-gated chloride channel (AHRD V1 **** Q96325_ARATH); contains Interpro domain(s) IPR002251 Chloride channel plant CLC

TGATATCTAGTTGTTTCAATTTATGTGACACATTTTAGATTTTGAGATTTAAATAAGTATATTTTTAATTGTAAATTTTTAATATACATTTTTAAATATTTTGAATCGTTAATTATTGTGACTTATATTACTTTTTATATAGTTTACACATATATAAATTTCATTTTAAGAAAATTAAAAATTTCATATGCAAACTATCGATCAAACATGAATTAATTGACTTTTTAAAAAAATAAATATATCACGTAAATTGAGACAAAAAAAATAAACATTCTTCGTCTTCATTTTAAAATGGTGAATTCAAATTACCATTGAGACCAAAATAAGCAAGAAGGGTAAGGTAAAAAAAAGACGAAGGAACATCAACCCAAACCTAATATCACCACATTTACCCACCCATGGGGTGTACATGTGGGAAGATAAAACATGGATAATTCTTGTATTTATTACCAAACACTAATGCCTTTAATTTACCTTGTAAAGAACGGACCAAGTAATCGATACATGTAAGATAGATAATGTTGGGTTTTAAAAGTTGTGAATAGAAAATGAAGAGGTGTGATTTTTATGAAGAGTTGTGACTTTTATGGAAAGTTGCGACTTTTATGAAAGGTGAAGACCTTTCCGAAAGATTATGACTTTTTCAAAGGTTTGTGAACTTTTCGGTAAGACACAATAAGAACCTTTTCGAACTACTTTTTATTTTCTATAAATTGAGGGATTTCCTTCTCATTTTAAAAATAGAATTTATGGACTTCTTCTTCTACTACTAAATCTAGTATTCTAAATGTATTTTACTGTCGTTGAATGGCTCGCTGACACTAGTATTTTGGGTATCAATACACTAGTGATTGAGATCATTCTATCCTGAGAGGAGATATTCCAAATCAAATCTCGGATACTAGAGGACAATAATTTCCTTAGGGAGACACTGTGTATTCAGTGGGCTTGATCTTCTTTTTGTTTTTCCAGTTTCTGATAAGTGTTACAAATTTTAGATTTATGAATTAGTTTCAGTTCTTCTATTCTTTTGATCTTCACTGGTTCATTAAACTTTGGTAACTTTGTATTTCTGCAAAGTTTGTTGGAATCAGTAAGATTCTTTAGACACATATTAACAACAATTCTTCTTTAAGAAAAATATTTCGTATGTTTTTCTAATCTGCTTCGGATTCTAGTTTCACTACTAGTTTATTTTTTTAGTTGTGAAAATGTTCTTAAACATTATTATCTAACAGAATTCTTCAAAGTTTTGTTTTAAATATGTTAGGAATACAAGATAAATAATAGATAATTATTTATTGAAACCCAATAAATCTTCCAGCCACATTGCTAACTACGTTCAATGTTCCTTTTTTTTAATTAACATATATTTTCCAATTTAAAATTCCTCCCAAAAAAATGTTCCTATCACTCGTTAGTCACATTTATTTAATTTTAATAATTTGTTAATAAAACTACAAAAGAACCAATGATAGTCTCCCATCTATATCAATGATTATCCATATTCATTATCGTTTCTCACCCAAAGAAGATATAGGAGGATATAAATTATATTAGGCGATAAGAATTTTGAAAATCAATCAAGTTCTATTTTCTTTTAAATTATTTTATATTATTATTTTTAAAAATAAATTATTACAGTATAACTATAATATTGGTTTATACGGAATGTGTTGTAAATTGGAAGTAAATCACGTTTCCTGTGTATCTCTCTTGCAAAAAAACCACAAGCAATTGTATGCATTCCTCTGTCTGAATTATCAACTATTAGTAGCTAGCTAGTTGTATATATCTCGAGTAGAGAAGCTTCAGTTGTGGTGTTTCTTTAATGGAGGAGCCAAATGGATTTGCAACAATAAATGACATGGAAGAAGAAAGAGAGTCGACAGATATCAATTACTCGAGAAACCGAACATTATCCTCCACTTCTGTAGCCCTAGAGGGAGCTAAGGTCTCCCACATCGAAAGTTTGGATTATGAGATCAATGAAAATGATCTCTTCAAGCATGATTGGAGAAAAAGATCAAGAGTTCAAACATTACAGTATGTCTTCATCAAATGGACACTCGCATTCCTGGTCGGCCTTTTTACCGGAGGTGTCGCCACCCTCATCAGTCTCTCAATCGAAAATATCTCTGGTTACAAACTCCGCGCTACTGTCAACTATATTGATGACAAAAGGTACTTTATGGGATTTGCATTTTTTGCGGGTGCTAACTTTCTGTTGACATTGCTAGCTGCCTTTATCACTGTTTATTTTGCACCTACGGCTGCCGGGCCTGGAGTTCCAGAAATTAAAGCCTATCTCAATGGGGTAGACACTCCCAATATGTTCGGGGCAACTACACTCTTTGTTAAGATCATTGGAAGCATTGGTGCAGTTTCAGCTGGGTTAGATCTTGGGAAAGAAGAACCACTGATTCACATTGGCAGTTGCATTGCTTCTTTATTAGGTCAAGGTGGATCAGACAGTTACAAACTTAGTTGGCATTGGCTCCGTTACTTCAACAATGATAGGGACAAGCGAGATCTCATCACATATGGCTCATCATCAGGTGTTTGTGCTGCTTTCCGTGCTCCAGTAGCTGGTGTTCTATTCGCATTAGAGGAAGTGGCAACATGGTGGAGAAGCGCCCTCATTTGGAGAACTTTCTTTAGCACTGCTGTTGTTGTGGTAGTATTAAGGATCTTCATGGATTACTGCAAATCTGGTAGCTGTGGACTTTTTGGAAGAGGGGGACTTATTATGTTTGATGTGAGTGATGTAATTGTGAGGTACCATATTGTGGACATCATTCCTGTTGTAATTATTGGAGTCATTGGTGGTCTCCTTGGGAGCCTCTACAATCATGTCCTCCACAAGGTTCTCAGGCTCTATAATCTCGTTAACGAGAAGGGAAAATTACATAAGTTGCTTCTTGCTCTAAGTGTTTCCCTCTTCACCTCCATTTGCATATATGGACTTCCTTTTCTTGCCAAATGCAAGCCTTGTGATTCATCTCTATCAGATTCTTGTCCTGGCACTGGAGAGACAGAAAACTTCAAACAATTCAACTGCCCAAATGGTTATTACAATGATCTTGCCACTCTTCTCCTTGCAACAAAGGAGGACGCTATCAGAAAAATTTTCTCTCTGAACACAGGCACTGAATTTCAAGTCATATCACTTCTTATCTTCTTTTTGTTGTATTGCATCTTGGGAGTTATTACTTTTGGGATTGCTGTGCCATCTGGTCTCTATATCCCAATCATCCTCATGGGTTCAGGTTATGGTCGCTTGCTTGGCATTGCCATGAGACCTTATACAAAAATTGATCAGGAGTTGTTTGCTGTTCTTGGAGCAGCTTCCCTTATGGCTGGTTCAATGAGAATGACAGTTACTGTTTGTGTCATATTTCTTGAGCTGACAAACAATCTACTTCTTCTGCCGATAACAATGCTTGTCCTTCTAATTGCTAAAATTGTTGCAGACTGCTTCAACCCAAGTATCTATGAAATGGTTTTGGAACTAAAAGGTCTACCTTTCTTGGAAGCACATCCAGAGGCATGGATGAGGAATATCATAGTTGGTGAGCTTTCTGATGTAAAGTCACCAGTAGTTACTCTTGAGGGAATTGAGAAAGTGAGACGAATCGTAGAGGTTCTAAAGTACACCACTCACAATGGATTCCCTGTTGTAGATGGTGTGATACCCGAGTTACATGGACTTGTCTTAAGAACTCACCTTCTTTTGGTGCTCAAGAAGAAGTGGTTCTTGAATGAGAGAAGGAGAACAGAAAATTGGGAAGTAGAGGAGAAATTCACATGGATTGATCTAGCAGAAAGGTGGGGGAAAATTGAAGATATTGCAGTTACAAAGGATGAAATGGAAATGTATGTTGATTTGCATCCTTTGATCAACACAACCCCTCATACAGTGGTGGAAAGCTTGTCAGTAGCAAAGGCAATGGTGGCTTTCAGGCAGGTCGGGCTTCGCCACATGATCATCGTGCCCAAATACCAAGCAGCAGGGGTATTTCCAGTGGTTGGAATCTTGACCAGACAAGACCTAAGGGCCTGCAACATTTTGAATGTCATCCCCCATCTGGCAAAGTCTAAGAGTATCAAAAAGGGGAACTAAACTTTTCAATTGTGAAAATATGCTTGTCATTCTTTTATAGATTTGCTTCCAATCGTCTCTTCTTTTCTTCCATTATTTTAGGAAGAGATACAGCAGAAGTAAACGAAAGGAAGCCTAAATTTCATCATGTAAATAAGTCGAAAAATAATCAATTATATTTGACATTGTTCTCCCGGGAAGAAATGAATGAATGAACGACATTATTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc02g094060.2.1SL2.50ch02:54691865..54694812764-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc02g094060.2SL2.50ch02:54691660..546966434,984-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc02g094060.2.1.1SL2.50ch02:54694661..546966431,983-1
exonexon:Solyc02g094060.2.1.2SL2.50ch02:54694364..54694564201-1
exonexon:Solyc02g094060.2.1.3SL2.50ch02:54694097..54694274178-n/a
exonexon:Solyc02g094060.2.1.4SL2.50ch02:54693370..54693902533-1
exonexon:Solyc02g094060.2.1.5SL2.50ch02:54692097..546932161,120-n/a
exonexon:Solyc02g094060.2.1.6SL2.50ch02:54691660..54691973314-n/a
intronintron:Solyc02g094060.2.1.2SL2.50ch02:54694565..54694660n/a-n/a
intronintron:Solyc02g094060.2.1.3SL2.50ch02:54694275..54694363n/a-n/a
intronintron:Solyc02g094060.2.1.4SL2.50ch02:54693903..54694096n/a-n/a
intronintron:Solyc02g094060.2.1.5SL2.50ch02:54693217..54693369n/a-n/a
intronintron:Solyc02g094060.2.1.6SL2.50ch02:54691974..54692096n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17746955%2Fdetails feature 17746955
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)