Solanum lycopersicum mRNA Solyc03g005350.2.1

mRNA details  
Name
Solyc03g005350.2.1
Type
mRNA
Length
1,625
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 **** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch03:204741..210152
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
5412
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g005350.2.1 BHLH transcription factor (AHRD V1 **** B6U846_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

TAAACCTATACGCCGGCAAACTCCGGCATGGCGGACAACCCACCGGAGGTATATGCTGCCGATGATTTTCTCGAGCAAATTCTGGCGATTCCCTCTTATGCTAGCCTGCCGGTAACTGATTTAACCGCCGGTGCCTCATCGGAGAATTCAACATCTGGTGTCTCTCAGCTCCAGCAGCAGCCGTTGTTCCCATTGGGGTTAAGTTTGGATAATGGCTTTGCTGACGCCAACAACACTGGAGGTTTTCAAGTGAAGACTGAAAGAGAAGCAATGAACATGGGGAATTTGTATCCAGGTCTAGAACATTTGCAATCTCATGCTGTTTGCCTAAGTGTTCCTCAAGTTCACCAAGTCCAGCCTTTTCAAGGCCACCCTACATCAAGCGCAATAGTAACAATACCACACCAACCTGCAATTCGTCCTAGGGTTCGGGCACGAAGAGGACAGGCCACTGATCCACATAGTATTGCTGAGCGGTTAAGGAGAGAAAGGATATCAGAACGAATAAAGGCTTTACAGGAACTTGCCCCCAGCTGCAATAAGACCGACAGGGCAGCAATGCTTGATGAGATTCTGGACTATGTGAAGTTCTTAAGGCTTCAAGTTAAGGTACTGAGCATGAGTAGGTTGGGAGGAACTAGCGCGGCGGCACAAGTTGTTGCTGATATTCCATTGCAGTCTGTTGAGGGAGACACCTGTGAAAGTCATTCCAACCAGCGCGTCTGGGAGAAGTGGTCTGATTCTGAAACAGAGCAAGAGGTAGCAAAGCTCATGGAGGAAGATGTTGGAACAGCCATGCAGTACCTTCAATCCAAATCACTCTGCATCATGCCTATTTCACTTGCTGCACTTATCTATCCGACTCAGCAAAGTGACAACCAATCAATGGTCAAGCCAGAACAAGCGGCCCCATTGTAGACTTCTAAATTACTGCAGGTGCAATCAAGAACTCCTAATTTCTTTTAGGCCCATCCGTCTATATATCCTTACCTATTTTCTCTTGAATCACCCTCTGAAATCCTTGGTAATGCAATCAAACTCAGATGACACAATTTTTGCTTTTAGCTCAATCATTGGCCCCTTTATCAACTTTCTTGAGTTCAGTCACACCTTGAACAATGGCAACACTTAAGAAAGCAACCAATCCATCTATCTATATCATTGTAGGGAGGAGTGTATATTTTTTTTTCCAAACTCTCTGTTATTAGCTGCTTGTTTCCCCCTCACTCTTGTGGGTTGGTTGTGACTCCTTGTATCTTTTTTATAGTGGATAGCTAGCGATGTATTATAAAAGAAAATTGTCCCAGCTTGCATTTGGTGGACTGTGCGGGAAGAAAGAAACCAAGTTTGTTTGAAGACAAAGCCATTAGTATATAGAAACTAAAGATGGAATGTTTAGGGCTTTTCTTTTTTTGGTGTAACCATAGCTTAATGGATGATTTAGAATCAACTTATGATTGTACTAGATTCCTTGTGAGAAGATTAAGGATTAGGAGCTTCTTCATTTCTTTATTTCTGTTCTTTTGCTCATCTGGATGTATATATGGGGGATTACACACCCTTTGTGTAGTTTGTTATTAATACACAAAAATGTTACCTGTTCCAAATTTTTTTTTATAAAAGTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g005350.2.1SL2.50ch03:204767..209445297+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g005350.2SL2.50ch03:204741..2101525,412+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g005350.2.1.1SL2.50ch03:204741..204998258+n/a
exonexon:Solyc03g005350.2.1.2SL2.50ch03:205725..20582399+n/a
exonexon:Solyc03g005350.2.1.3SL2.50ch03:206999..207118120+n/a
exonexon:Solyc03g005350.2.1.4SL2.50ch03:207270..20733566+n/a
exonexon:Solyc03g005350.2.1.5SL2.50ch03:207759..20782466+n/a
exonexon:Solyc03g005350.2.1.6SL2.50ch03:209004..20908178+n/a
exonexon:Solyc03g005350.2.1.7SL2.50ch03:209215..210152938+n/a
intronintron:Solyc03g005350.2.1.1SL2.50ch03:204999..205724n/a+n/a
intronintron:Solyc03g005350.2.1.2SL2.50ch03:205824..206998n/a+n/a
intronintron:Solyc03g005350.2.1.3SL2.50ch03:207119..207269n/a+n/a
intronintron:Solyc03g005350.2.1.4SL2.50ch03:207336..207758n/a+n/a
intronintron:Solyc03g005350.2.1.5SL2.50ch03:207825..209003n/a+n/a
intronintron:Solyc03g005350.2.1.6SL2.50ch03:209082..209214n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17748209%2Fdetails feature 17748209
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)