Solanum lycopersicum mRNA Solyc03g019730.2.1
 mRNA details
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| Name | Type |
Length
1,292
|
Organism |
|
Description
Sumo activating enzyme 1b (AHRD V1 **** D7MQ99_ARALY); contains Interpro domain(s) IPR009036 Molybdenum cofactor biosynthesis, MoeB
|
|
Location(s)
SL2.50ch03:61416754..61422688
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0008152
- GO:0003824
- Length
- 5935
- Nb exon
- 11
- Sifter term
- GO:0019948
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g019730.2.1 Sumo activating enzyme 1b (AHRD V1 **** D7MQ99_ARALY); contains Interpro domain(s) IPR009036 Molybdenum cofactor biosynthesis, MoeB
CAAGGGAATATAATTTTAGTTATTTTGACGAATTGATGCACAAAAGGAAGAGTAGAATACATTATTCGTCTGCAAAATTTCTTCAGTTATTCTGCCATTTGAGGATGGGAACGGAAGGTGAGCAATTGACGGAGCAGGAAACTGCCATCTATGATCGACAAATTAGGGTTTGGGGCGTTGATGCTCAGAGAAGGCTCAGCAAATCCAATGTGTTTGTTAGTGGGCTGAGAGGAACTAGTGTTGAGTTCTGCAAGAATATTGTTTTAGCTGGAGTAGGTAGTTTGACACTAAATGATGACCGGTTGGTGACCGAAGATCTATTATTTGCTAATTTCTTAACTCCTCCCGCTGAAAATGATTTCCGGGGGAAGTCTGTTGCTGAGCTTTGCTGTGATTCTTTGAAGGATTTCAATCCTATGGTTTCTGTTTCTGTAGAGAAAGGTGCTCTGTCCATCTTCGATGCTGATTTCTTTCAGAAGTTTGATGTTGTTGTTGTTAATTGTTGCTCCCTTTTGACAAAAAAATCAGTAAATGCAAAATGTCGCAAGTTGCCAAAGCGTGTTGCATTTTACAGTGTAGAATGCCGTGACTCCTGCGGTGAGATATTTGTTGATTTACAGAACTACAGCTACTGTAAGAAAAAAAATGAAGAGACAATTGAATGTAAATTGCATTATCCAAGTTTTGAGGAAGCCATTGCAGTCCCCTGGAGATCTCTACCGAAGAGAATGTCAAAGCTGTATTATGCAATGAGAGTTATAGAAAGGTTTGAAGAGCTTGAGGGACGAAATCCTGGAGAAACTTCTGTTGATGACCTTCCAAATGTTCAGAAGTTGAGGAAGGAACTCTGCGAGGCACATTCCTTAAATGAATCTCAGATCCCAGATTCTCTTCTGAGAAGATTGATAGCAAGTATAAGTGAATTTCCTCCTGTCTGTGCTATCGTTGGAGGAATTCTCGGACAGGAGGTAATAAAAGCAATATCTGGCAAAGGCGATCCTCTTAAGAACTTTTTCTTCTTTGACGCCATGGATGGTAAAGGGATAATAGAGGACATATCTAATGGCAAGAGCTGAGGATTGACCTGTGTGGTAAAAACTATCTTTAAGAAATGCTGACCTTGTTGGGTATCTTTTTTTAGGACTAATCACAACCTAAACTATCTGACATTCCTTTAAATTGTGTTCTGATCAGCAAAATTATGATATTTTTTTTTGACATTTGGTACCTTCAGTAAAGTGCTCATGTTGGGCTTGTATTTTGAAACATTCTAGGTAATGTCTCATTTTCAG
CAAGGGAATATAATTTTAGTTATTTTGACGAATTGATGCACAAAAGGAAGAGTAGAATACATTATTCGTCTGCAAAATTTCTTCAGTTATTCTGCCATTTGAGGATGGGAACGGAAGGTGAGCAATTGACGGAGCAGGAAACTGCCATCTATGATCGACAAATTAGGGTTTGGGGCGTTGATGCTCAGAGAAGGCTCAGCAAATCCAATGTGTTTGTTAGTGGGCTGAGAGGAACTAGTGTTGAGTTCTGCAAGAATATTGTTTTAGCTGGAGTAGGTAGTTTGACACTAAATGATGACCGGTTGGTGACCGAAGATCTATTATTTGCTAATTTCTTAACTCCTCCCGCTGAAAATGATTTCCGGGGGAAGTCTGTTGCTGAGCTTTGCTGTGATTCTTTGAAGGATTTCAATCCTATGGTTTCTGTTTCTGTAGAGAAAGGTGCTCTGTCCATCTTCGATGCTGATTTCTTTCAGAAGTTTGATGTTGTTGTTGTTAATTGTTGCTCCCTTTTGACAAAAAAATCAGTAAATGCAAAATGTCGCAAGTTGCCAAAGCGTGTTGCATTTTACAGTGTAGAATGCCGTGACTCCTGCGGTGAGATATTTGTTGATTTACAGAACTACAGCTACTGTAAGAAAAAAAATGAAGAGACAATTGAATGTAAATTGCATTATCCAAGTTTTGAGGAAGCCATTGCAGTCCCCTGGAGATCTCTACCGAAGAGAATGTCAAAGCTGTATTATGCAATGAGAGTTATAGAAAGGTTTGAAGAGCTTGAGGGACGAAATCCTGGAGAAACTTCTGTTGATGACCTTCCAAATGTTCAGAAGTTGAGGAAGGAACTCTGCGAGGCACATTCCTTAAATGAATCTCAGATCCCAGATTCTCTTCTGAGAAGATTGATAGCAAGTATAAGTGAATTTCCTCCTGTCTGTGCTATCGTTGGAGGAATTCTCGGACAGGAGGTAATAAAAGCAATATCTGGCAAAGGCGATCCTCTTAAGAACTTTTTCTTCTTTGACGCCATGGATGGTAAAGGGATAATAGAGGACATATCTAATGGCAAGAGCTGAGGATTGACCTGTGTGGTAAAAACTATCTTTAAGAAATGCTGACCTTGTTGGGTATCTTTTTTTAGGACTAATCACAACCTAAACTATCTGACATTCCTTTAAATTGTGTTCTGATCAGCAAAATTATGATATTTTTTTTTGACATTTGGTACCTTCAGTAAAGTGCTCATGTTGGGCTTGTATTTTGAAACATTCTAGGTAATGTCTCATTTTCAG
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g019730.2.1 | SL2.50ch03:61416788..61422472 | 347 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g019730.2 | SL2.50ch03:61416754..61422688 | 5,935 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g019730.2.1.1 | SL2.50ch03:61416754..61416857 | 104 | + | n/a |
| exon | exon:Solyc03g019730.2.1.10 | SL2.50ch03:61422182..61422286 | 105 | + | n/a |
| exon | exon:Solyc03g019730.2.1.11 | SL2.50ch03:61422362..61422688 | 327 | + | n/a |
| exon | exon:Solyc03g019730.2.1.2 | SL2.50ch03:61417012..61417100 | 89 | + | 1 |
| exon | exon:Solyc03g019730.2.1.3 | SL2.50ch03:61417172..61417223 | 52 | + | n/a |
| exon | exon:Solyc03g019730.2.1.4 | SL2.50ch03:61418486..61418681 | 196 | + | 2 |
| exon | exon:Solyc03g019730.2.1.5 | SL2.50ch03:61419517..61419596 | 80 | + | n/a |
| exon | exon:Solyc03g019730.2.1.6 | SL2.50ch03:61419732..61419848 | 117 | + | n/a |
| exon | exon:Solyc03g019730.2.1.7 | SL2.50ch03:61420061..61420111 | 51 | + | n/a |
| exon | exon:Solyc03g019730.2.1.8 | SL2.50ch03:61421353..61421419 | 67 | + | 2 |
| exon | exon:Solyc03g019730.2.1.9 | SL2.50ch03:61421994..61422097 | 104 | + | n/a |
| intron | intron:Solyc03g019730.2.1.10 | SL2.50ch03:61422098..61422181 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.11 | SL2.50ch03:61422287..61422361 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.2 | SL2.50ch03:61416858..61417011 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.3 | SL2.50ch03:61417101..61417171 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.4 | SL2.50ch03:61417224..61418485 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.5 | SL2.50ch03:61418682..61419516 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.6 | SL2.50ch03:61419597..61419731 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.7 | SL2.50ch03:61419849..61420060 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.8 | SL2.50ch03:61420112..61421352 | n/a | + | n/a |
| intron | intron:Solyc03g019730.2.1.9 | SL2.50ch03:61421420..61421993 | n/a | + | n/a |
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