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Solanum lycopersicum mRNA Solyc03g025190.2.1

mRNA details  
Name
Solyc03g025190.2.1
Type
mRNA
Length
1,638
Organism
Solanum lycopersicum
Description
Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_YERP3); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE
Location(s)
SL2.50ch03:2663426..2666679
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016020
Length
3254
Nb exon
7
Sifter term
  • GO:0015299
  • GO:0015559
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g025190.2.1 Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_YERP3); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE

ATGGAGACACCGTTGCTGAATGGCTACTCCGGCTCCGGCGAACGCAACGACCTTATCGGGGCGGACGGGGACTACCGTCCGGCGAAAAGTACAAAGGATTGGTGGGCAATTTTCTGTGTGGAGACATTGAAACTGTGGAGAATTGGAGGTCCTATAGCATTCAACATAATCTGCCAATATGGAGTGAATTCTCTTACAAATATATTTGTTGGACATCTTGGAAATGTTGAGCTCTCTGCTATTTCTATTGCTCAGACTGTTATTAGTACTTTTTCTTTTGGCTTCATGATGGGAATGGGTAGTGCATTGGAGACACTATGTGGCCAGGCATATGGAGCAGGGCAAGTTCACATGTTGGGCGTTTATATGCAACGATCCATCATAATCCTGCTAGCTACTTGTGTCTTTCTATTGCCCATTTACTTATTCACCACTCCACTTCTCGTGTTGCTAGGCCAAGAAACTGCAATAGCGGACCTCTCTGGAAGATATACCATGTTACTCATCCCACAGTTGTTTTCACTTGCTATCAATTTTCCTACTTCCAAATTTCTTCAAGCTCAGAGTAAAGTGGATGTTCTCGCTGGGATTGGATTCGCAGCTGTGCTGGTGCACGCTTTGTTCCTCTGGCTCTTTATATATACACTTGAATGGGGTACTAATGGTGCTGCTATAGCCTTTGACCTCACGAATTGGCTTACTGCGATGGCTCAATTAGCATACGTTGTTGGATGGTGTAAGGATGGGTGGAAAGGGTTGTCGTGGTCAGCGTTCAATGAGATTTGGGCATTCGTGAGACTTTCTATTGCTTCAGCTGTTATGTTATGCCTTGAGATTTGGTACATGATGAGTATTATTCTCCTTGTTGGCCATCTTAACAACGCCGTCATAGCAGTTGGCTCCATTTCAATTTGTATGAACATCAATGGATGGGAGAGCATGCTTTTCATTGGAATTAATGCTGCCATAAGCATCCGAGTCTCAAATGAACTGGGGCAAGGACATCCAAGAGCTACCAAATACTCGGTCTACATCACGGTGTTTCAGTCCCTCCTAATAGGGATACTCTGCATGGTAATTGTACTAGTAGCTAGAGATCATCTGGCCATTATCTTTTCAAACAGCAAGGAGATGCAAGAAGCTGTTGCTGATCTTGCTTACCTTCTAGGGATTACCATGGTCCTTAATAGCGTTCAGCCGGTTATATCAGGGGTTGCTGTTGGAGGTGGATGGCAAGCTTTAGTAGCTTATATCAATCTTGGTTGCTATTATGTTTTTGGACTCCCTCTTGGATATCTTCTTGGTTATGTAGCAAAATTAGGAACAAAGGGACTTTGGTTAGGGATGATAGCAGGGGCAGCTTTGCAGACTCTTCTACTCTTGATTATACTGTATAAGACTAACTGGAACAAGGAGGTTAACGACACGACGGAGCGTATGCGCAAGTGGGGAGGTCAAGATTTTGAGACACAGAAATCTGCAGATGGGCAGTTAACTATTGAGAATGGTGGTGTTGCTTAAGTTTATGATTGATTCATTGAAATAATGTATTTTTTCTTGTTTATGTTTGAGTTTGAAACTTGTAAAATCTGTTTCTTTTGTTATACACTCAGCAATAGAAATGTGGATTTTCAAATA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g025190.2.1SL2.50ch03:2663425..2666562507+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g025190.2SL2.50ch03:2663426..26666793,254+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g025190.2.1.1SL2.50ch03:2663426..2663713288+n/a
exonexon:Solyc03g025190.2.1.2SL2.50ch03:2664593..2665218626+n/a
exonexon:Solyc03g025190.2.1.3SL2.50ch03:2665340..266539657+1
exonexon:Solyc03g025190.2.1.4SL2.50ch03:2665698..2665936239+1
exonexon:Solyc03g025190.2.1.5SL2.50ch03:2666017..2666135119+2
exonexon:Solyc03g025190.2.1.6SL2.50ch03:2666293..266637987+n/a
exonexon:Solyc03g025190.2.1.7SL2.50ch03:2666458..2666679222+n/a
intronintron:Solyc03g025190.2.1.1SL2.50ch03:2663714..2664592n/a+n/a
intronintron:Solyc03g025190.2.1.2SL2.50ch03:2665219..2665339n/a+n/a
intronintron:Solyc03g025190.2.1.3SL2.50ch03:2665397..2665697n/a+n/a
intronintron:Solyc03g025190.2.1.4SL2.50ch03:2665937..2666016n/a+n/a
intronintron:Solyc03g025190.2.1.5SL2.50ch03:2666136..2666292n/a+n/a
intronintron:Solyc03g025190.2.1.6SL2.50ch03:2666380..2666457n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17752328%2Fdetails feature 17752328
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