Solanum lycopersicum mRNA Solyc03g025560.2.1
mRNA details
|
| Name | Type |
Length
663
|
Organism |
|
Description
Undecaprenyl pyrophosphate synthase (AHRD V1 **** UPPS_PYRFU); contains Interpro domain(s) IPR001441 Di-trans-poly-cis-decaprenylcistransferase-like
|
|
Location(s)
SL2.50ch03:2960198..2962401
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016765
- Length
- 2204
- Sifter term
- GO:0045547
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g025560.2.1 Undecaprenyl pyrophosphate synthase (AHRD V1 **** UPPS_PYRFU); contains Interpro domain(s) IPR001441 Di-trans-poly-cis-decaprenylcistransferase-like
TCTCTAAACTACATGTGTTAGAGGagagacggggagaagagtctgccgcccgacgttgattcctctaaacatcatcagcccgggcactgtttttctgatcacaactcaaaggGTTGATTTTGGAGCATGATCAAGTATTAATTCGAGGGTTGATATGGAAGGTGTGAACGGTAAAAAAGTGGGGCATTTATGTGAAAATATTAGCAGCTTTGTTCGCCAATGTATATTTTCTATACTTAGTGTGGGTCCTGTTCCTAGTCACATTGCTTTTATCATGGATGGAAACCGTAGATATTCTAAGAAACAGAACTTGCTTGATGGGAATGGACATAGAGCGGGATTTTCAGCTCTTATCAATATGCTAAAATATTGTTACGAGCTTGGTGTAAAATATATAACAGTTTATGCATTCAGCATTGATAACTTCAAGCGAAGGCCTGAAGAAGTTGTATCACTAATGAAACTGATGCAGGAAAAAATTGATGAATTAACAAAAGAGGAGAGCATTGTAAACCGCCTTGGTATTAGAATTTACTTTCAAGGAAACCTTAAACTTTTGAGTGACCATGTCAGGTTAGCCGCCGAGAGGGCTATGGTAAAGACATCAGGTAATTCAAAAGCTATATTGTCTATTTGTGTTCTTACCTTATAGCAGAAGAGAAC
TCTCTAAACTACATGTGTTAGAGGagagacggggagaagagtctgccgcccgacgttgattcctctaaacatcatcagcccgggcactgtttttctgatcacaactcaaaggGTTGATTTTGGAGCATGATCAAGTATTAATTCGAGGGTTGATATGGAAGGTGTGAACGGTAAAAAAGTGGGGCATTTATGTGAAAATATTAGCAGCTTTGTTCGCCAATGTATATTTTCTATACTTAGTGTGGGTCCTGTTCCTAGTCACATTGCTTTTATCATGGATGGAAACCGTAGATATTCTAAGAAACAGAACTTGCTTGATGGGAATGGACATAGAGCGGGATTTTCAGCTCTTATCAATATGCTAAAATATTGTTACGAGCTTGGTGTAAAATATATAACAGTTTATGCATTCAGCATTGATAACTTCAAGCGAAGGCCTGAAGAAGTTGTATCACTAATGAAACTGATGCAGGAAAAAATTGATGAATTAACAAAAGAGGAGAGCATTGTAAACCGCCTTGGTATTAGAATTTACTTTCAAGGAAACCTTAAACTTTTGAGTGACCATGTCAGGTTAGCCGCCGAGAGGGCTATGGTAAAGACATCAGGTAATTCAAAAGCTATATTGTCTATTTGTGTTCTTACCTTATAGCAGAAGAGAAC
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g025560.2.1 | SL2.50ch03:2960949..2962390 | 166 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g025560.2 | SL2.50ch03:2960198..2962401 | 2,204 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g025560.2.1.1 | SL2.50ch03:2960198..2960309 | 112 | + | n/a |
| exon | exon:Solyc03g025560.2.1.2 | SL2.50ch03:2960908..2961435 | 528 | + | n/a |
| exon | exon:Solyc03g025560.2.1.3 | SL2.50ch03:2962379..2962401 | 23 | + | n/a |
| intron | intron:Solyc03g025560.2.1.1 | SL2.50ch03:2960310..2960907 | n/a | + | n/a |
| intron | intron:Solyc03g025560.2.1.2 | SL2.50ch03:2961436..2962378 | n/a | + | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
mRNA details
mRNA details

