Solanum lycopersicum mRNA Solyc03g034100.2.1
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Name | Type |
Length
1,344
|
Organism |
Description |
Location(s)
SL2.50ch03:5790338..5792106
|
GFF source
ITAG_eugene
|
- Length
- 1769
![]() | spliced mRNA sequence, including UTRs |
>Solyc03g034100.2.1 Plant-specific domain TIGR01568 family protein (AHRD V1 *--- B6U561_MAIZE); contains Interpro domain(s) IPR006458 Protein of unknown function DUF623, plant
GAGATCATGATTCATCACAAAAATTACAAAAAGAAATGGCAAAACTTTTGAAGTTTAGAATATCTAAAGCTATCTCTAACTCTTTTCATTCATGTCGTTCCAAGGACCCTTGTACACTTCCTCAACATCCTGTCCCTTCATTCTTACAAAATACACAATTCATCACCGATGATCATCTTCTGTTCGAAGAAATGATTCAACAAAATAACGAGTCACAACTGATATCGACACATCATGAACATTTCCCCATAATCACCTCACCCTCCTTCAAACACCACGTGTCGGTGACTCCGATAACCGCCACCGGCCAATGTAGCTCAAGGAATGGAGAAGCATTCAGTACTACATCCGATGACAGCCACACCAGGTCACCTTCACATGAATTCAAGTGGAAAAAAGAAGAAGACAAGTGGCAACATTTTATCAAGACGAACTCTGACGATGATACAAAACAACAACCTCGTAGGAAAATCTCTTACTCCTTTAGCTCTGACAATTCAGACAACGATAAGATTTTAATAGAGATAAAGAAAAAAATTAGTACTAGTAAAACAAATTTTTTTATGATGATGAGCACTACGTCCTCATCATCATCAATGGATGAAAACGAGATTAATTTTACTAGTAAAAAAACTAAATGGGATTATCATGAGGATATCGATATTACAAATGAAGATGAAGAAAACGAGACTGAGACATTCATATCTTCTTCTCGTAAAAGCCACGTGGAGTTTCCGGATGATTCATCTTTGAATTTTAGCCATGAGTTTGATACAATTTACAAAAATACCACTAGAAGGTGTCAAAAAAAGATTGGCTATAGCAAGAGAAGAGATCATGTCAAGAACACAAGATCTAGATCTTCAAGGGACATGAACAATATTGGTAGAAGGTCATCAATTTCGACGTCAACGACATCATCGGACGGCGAGTTACCTCCAAGATTATCGGTGTTCAAGAAGTTGATACCTTGTAACGTGGAGGGGAAAGTAAAGGAGAGTTTTGCTATAGTGAAGAAATCAGAGGACCCATATGAAGATTTTAAAAGCTCTATGATGGAAATGATTTTAGAGAAAAAAATATTTGAGAAAAATGATTTGGAGCAACTTTTGCAATGTTTTTTGTCATTAAATGCTAAAAATTGTCATGGGGTGATTGTTGAGGCTTTTTCTGAGATTTGGGAGACATTGTTTTCACCTAATCATAATTAATGTTAGTTGTTAGGATAATTTCAAGAATTAGTACTCTATTAGTTTATTTTTAATTGGTCTTTTAGAGAGTTAATGTGTATGGCTTTAGACTAATATATATTGTTTTATCATATATATTAGTAATATGATAATG
GAGATCATGATTCATCACAAAAATTACAAAAAGAAATGGCAAAACTTTTGAAGTTTAGAATATCTAAAGCTATCTCTAACTCTTTTCATTCATGTCGTTCCAAGGACCCTTGTACACTTCCTCAACATCCTGTCCCTTCATTCTTACAAAATACACAATTCATCACCGATGATCATCTTCTGTTCGAAGAAATGATTCAACAAAATAACGAGTCACAACTGATATCGACACATCATGAACATTTCCCCATAATCACCTCACCCTCCTTCAAACACCACGTGTCGGTGACTCCGATAACCGCCACCGGCCAATGTAGCTCAAGGAATGGAGAAGCATTCAGTACTACATCCGATGACAGCCACACCAGGTCACCTTCACATGAATTCAAGTGGAAAAAAGAAGAAGACAAGTGGCAACATTTTATCAAGACGAACTCTGACGATGATACAAAACAACAACCTCGTAGGAAAATCTCTTACTCCTTTAGCTCTGACAATTCAGACAACGATAAGATTTTAATAGAGATAAAGAAAAAAATTAGTACTAGTAAAACAAATTTTTTTATGATGATGAGCACTACGTCCTCATCATCATCAATGGATGAAAACGAGATTAATTTTACTAGTAAAAAAACTAAATGGGATTATCATGAGGATATCGATATTACAAATGAAGATGAAGAAAACGAGACTGAGACATTCATATCTTCTTCTCGTAAAAGCCACGTGGAGTTTCCGGATGATTCATCTTTGAATTTTAGCCATGAGTTTGATACAATTTACAAAAATACCACTAGAAGGTGTCAAAAAAAGATTGGCTATAGCAAGAGAAGAGATCATGTCAAGAACACAAGATCTAGATCTTCAAGGGACATGAACAATATTGGTAGAAGGTCATCAATTTCGACGTCAACGACATCATCGGACGGCGAGTTACCTCCAAGATTATCGGTGTTCAAGAAGTTGATACCTTGTAACGTGGAGGGGAAAGTAAAGGAGAGTTTTGCTATAGTGAAGAAATCAGAGGACCCATATGAAGATTTTAAAAGCTCTATGATGGAAATGATTTTAGAGAAAAAAATATTTGAGAAAAATGATTTGGAGCAACTTTTGCAATGTTTTTTGTCATTAAATGCTAAAAATTGTCATGGGGTGATTGTTGAGGCTTTTTCTGAGATTTGGGAGACATTGTTTTCACCTAATCATAATTAATGTTAGTTGTTAGGATAATTTCAAGAATTAGTACTCTATTAGTTTATTTTTAATTGGTCTTTTAGAGAGTTAATGTGTATGGCTTTAGACTAATATATATTGTTTTATCATATATATTAGTAATATGATAATG
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc03g034100.2.1 | SL2.50ch03:5790372..5791973 | 392 | + | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc03g034100.2 | SL2.50ch03:5790338..5792106 | 1,769 | + | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc03g034100.2.1.1 | SL2.50ch03:5790338..5790704 | 367 | + | n/a |
exon | exon:Solyc03g034100.2.1.2 | SL2.50ch03:5790830..5791347 | 518 | + | n/a |
exon | exon:Solyc03g034100.2.1.3 | SL2.50ch03:5791648..5792106 | 459 | + | 1 |
intron | intron:Solyc03g034100.2.1.1 | SL2.50ch03:5790705..5790829 | n/a | + | n/a |
intron | intron:Solyc03g034100.2.1.2 | SL2.50ch03:5791348..5791647 | n/a | + | n/a |
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