Solanum lycopersicum mRNA Solyc03g044300.2.1

mRNA details  
Name
Solyc03g044300.2.1
Type
mRNA
Length
1,650
Organism
Solanum lycopersicum
Description
AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
Location(s)
SL2.50ch03:8777728..8782356
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0003677
  • GO:0006355
Length
4629
Nb exon
9
Sifter term
GO:0003677
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g044300.2.1 AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding

ATAAGCTGCTTTAGGCTTATTCTTCCGAAACTAGCCTCGTCTATATCCATCATCTCTCTCTTAATTTTTATTTTTTTTCTTTCCCCAACAACTTCAACTTCTCTATAAGTCATAACTTCCATCTTTCTTTCAATTTACAACAAAAAAATAAATAAATCATTCTTTTCTTCATTTCATACATCAATATAGGTCACTTGCAACCAAATATCGAAAAATACACTCATTTTAATTCTATCGACAAAAGAAATGTGGAATTTAAATGATTCCCCTGATCAGACAATGGAGTATGAATCCGATGAAGGTATAACGGTTAGATCGGAATCAAATTCAATTTCATCCGCTCTACTTGTTGTAGAAGACGGTAATTCATCAGAAGAAGACGGTGAAAAAGGTAAAAAAAAGAAAAGTAATAATACACCAGGTAAAATATTCGGATTTTCGATTAAAGACCACAATTTGGAATCGCCGGTAGTTACCCGGCAATTTTTTCCGGTAGATAACGAGTCTACCAATTTTCCAAGGGCACAATGGGCTGGAATTAAATTTTGTGAATCGGAACCGCCACTTGTCAATGGATTAGTGGGGAACAAAATTGACGTGTTGCAACAACAGCCAATTAAAAAAAGCCGTCGTGGACCACGTTCAAGAAGTTCACAGTACCGTGGTGTTACCTTTTACCGGAGGACTGGCCGGTGGGAATCTCATATATGGGATTGTGGGAAACAAGTGTATTTAGGTGGATTTGATACAGCACATGCAGCAGCTCGTGCATATGATAGGGCAGCAATCAAATTCCGGGGAGCGGAGGCGGACATAAACTTTACCTCGAAAGATTATGAAGATGACTTAAAACAGATGAGCAATTTAACCAAAGAAGAATTTGTGCATGTACTAAGGAGACAAAGTACTGGTTTTCCAAGAGGAAGTTCCAAGTATAGAGGAGTCACTTTGCATAAATGTGGTAGATGGGAAGCTAGAATGGGACAATTCTTAGGCAAAAAGTATGTTTATTTAGGCCTATTTGATACTGAAGTTGAAGCTGCCAGAGCTTATGATAAAGCTGCTATCAAGTGTAATGGAAAAGATGCAGTTACCAACTTTGATCGTAGCATTTATGAAAATGAACTTAACTCAACCGAATGTACTGATAATGCAACGGACCACAATCTTGACTTAAGCTTAGGAGGTTCAAGCCAAGAAATGGGGGACAATAGGGGTCAAAATTCTTCATCTAATTTGCAATTGGATGGCCATTGGGGCCACCAAGGGTCATCAAGGCATAATAATAAGGTTCAGACTCCGAGCAGCAACAATGTAGGCCAAATTGGTGGAACAAGTAATTTTCAAAATAATTATGAGATAATTGCAACTGCTGCAGCATCATCAGGATTCCCCCAGCAGATAATAAGGACTCAAAATAATGGCTTCCATCATTATTTTATGAGACCTTGACCATTCATTAATTTCTTCATGTTCTTTTATTAATCTTTGTAAAGAGTAAAATCAATTAATGTTGAGATTATAATTAATATTCTCAAAACATAAACAAACAGATTATATTGGTTAGTATATATATGTTGGGAGGAAATTCCAACTCTTTGGAAAAGTTAAGTGTAACCTTTTTTTTTTTGTTAAATTATTATTATTATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g044300.2.1SL2.50ch03:8777973..8782158402+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g044300.2SL2.50ch03:8777728..87823564,629+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g044300.2.1.1SL2.50ch03:8777728..8778437710+n/a
exonexon:Solyc03g044300.2.1.2SL2.50ch03:8778534..877855926+n/a
exonexon:Solyc03g044300.2.1.3SL2.50ch03:8778645..877867531+1
exonexon:Solyc03g044300.2.1.4SL2.50ch03:8778839..877892688+2
exonexon:Solyc03g044300.2.1.5SL2.50ch03:8779313..8779458146+1
exonexon:Solyc03g044300.2.1.6SL2.50ch03:8779540..877958445+n/a
exonexon:Solyc03g044300.2.1.7SL2.50ch03:8780141..878023292+1
exonexon:Solyc03g044300.2.1.8SL2.50ch03:8780355..8780506152+1
exonexon:Solyc03g044300.2.1.9SL2.50ch03:8781997..8782356360+2
intronintron:Solyc03g044300.2.1.1SL2.50ch03:8778438..8778533n/a+n/a
intronintron:Solyc03g044300.2.1.2SL2.50ch03:8778560..8778644n/a+n/a
intronintron:Solyc03g044300.2.1.3SL2.50ch03:8778676..8778838n/a+n/a
intronintron:Solyc03g044300.2.1.4SL2.50ch03:8778927..8779312n/a+n/a
intronintron:Solyc03g044300.2.1.5SL2.50ch03:8779459..8779539n/a+n/a
intronintron:Solyc03g044300.2.1.6SL2.50ch03:8779585..8780140n/a+n/a
intronintron:Solyc03g044300.2.1.7SL2.50ch03:8780233..8780354n/a+n/a
intronintron:Solyc03g044300.2.1.8SL2.50ch03:8780507..8781996n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17756274%2Fdetails feature 17756274
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