Solanum lycopersicum mRNA Solyc03g044300.2.1
mRNA details
|
| Name | Type |
Length
1,650
|
Organism |
| Description |
|
Location(s)
SL2.50ch03:8777728..8782356
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0003677
- GO:0006355
- Length
- 4629
- Sifter term
- GO:0003677
mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g044300.2.1 AP2-like ethylene-responsive transcription factor At1g16060 (AHRD V1 *-*- AP2L1_ARATH); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
ATAAGCTGCTTTAGGCTTATTCTTCCGAAACTAGCCTCGTCTATATCCATCATCTCTCTCTTAATTTTTATTTTTTTTCTTTCCCCAACAACTTCAACTTCTCTATAAGTCATAACTTCCATCTTTCTTTCAATTTACAACAAAAAAATAAATAAATCATTCTTTTCTTCATTTCATACATCAATATAGGTCACTTGCAACCAAATATCGAAAAATACACTCATTTTAATTCTATCGACAAAAGAAATGTGGAATTTAAATGATTCCCCTGATCAGACAATGGAGTATGAATCCGATGAAGGTATAACGGTTAGATCGGAATCAAATTCAATTTCATCCGCTCTACTTGTTGTAGAAGACGGTAATTCATCAGAAGAAGACGGTGAAAAAGGTAAAAAAAAGAAAAGTAATAATACACCAGGTAAAATATTCGGATTTTCGATTAAAGACCACAATTTGGAATCGCCGGTAGTTACCCGGCAATTTTTTCCGGTAGATAACGAGTCTACCAATTTTCCAAGGGCACAATGGGCTGGAATTAAATTTTGTGAATCGGAACCGCCACTTGTCAATGGATTAGTGGGGAACAAAATTGACGTGTTGCAACAACAGCCAATTAAAAAAAGCCGTCGTGGACCACGTTCAAGAAGTTCACAGTACCGTGGTGTTACCTTTTACCGGAGGACTGGCCGGTGGGAATCTCATATATGGGATTGTGGGAAACAAGTGTATTTAGGTGGATTTGATACAGCACATGCAGCAGCTCGTGCATATGATAGGGCAGCAATCAAATTCCGGGGAGCGGAGGCGGACATAAACTTTACCTCGAAAGATTATGAAGATGACTTAAAACAGATGAGCAATTTAACCAAAGAAGAATTTGTGCATGTACTAAGGAGACAAAGTACTGGTTTTCCAAGAGGAAGTTCCAAGTATAGAGGAGTCACTTTGCATAAATGTGGTAGATGGGAAGCTAGAATGGGACAATTCTTAGGCAAAAAGTATGTTTATTTAGGCCTATTTGATACTGAAGTTGAAGCTGCCAGAGCTTATGATAAAGCTGCTATCAAGTGTAATGGAAAAGATGCAGTTACCAACTTTGATCGTAGCATTTATGAAAATGAACTTAACTCAACCGAATGTACTGATAATGCAACGGACCACAATCTTGACTTAAGCTTAGGAGGTTCAAGCCAAGAAATGGGGGACAATAGGGGTCAAAATTCTTCATCTAATTTGCAATTGGATGGCCATTGGGGCCACCAAGGGTCATCAAGGCATAATAATAAGGTTCAGACTCCGAGCAGCAACAATGTAGGCCAAATTGGTGGAACAAGTAATTTTCAAAATAATTATGAGATAATTGCAACTGCTGCAGCATCATCAGGATTCCCCCAGCAGATAATAAGGACTCAAAATAATGGCTTCCATCATTATTTTATGAGACCTTGACCATTCATTAATTTCTTCATGTTCTTTTATTAATCTTTGTAAAGAGTAAAATCAATTAATGTTGAGATTATAATTAATATTCTCAAAACATAAACAAACAGATTATATTGGTTAGTATATATATGTTGGGAGGAAATTCCAACTCTTTGGAAAAGTTAAGTGTAACCTTTTTTTTTTTGTTAAATTATTATTATTATT
ATAAGCTGCTTTAGGCTTATTCTTCCGAAACTAGCCTCGTCTATATCCATCATCTCTCTCTTAATTTTTATTTTTTTTCTTTCCCCAACAACTTCAACTTCTCTATAAGTCATAACTTCCATCTTTCTTTCAATTTACAACAAAAAAATAAATAAATCATTCTTTTCTTCATTTCATACATCAATATAGGTCACTTGCAACCAAATATCGAAAAATACACTCATTTTAATTCTATCGACAAAAGAAATGTGGAATTTAAATGATTCCCCTGATCAGACAATGGAGTATGAATCCGATGAAGGTATAACGGTTAGATCGGAATCAAATTCAATTTCATCCGCTCTACTTGTTGTAGAAGACGGTAATTCATCAGAAGAAGACGGTGAAAAAGGTAAAAAAAAGAAAAGTAATAATACACCAGGTAAAATATTCGGATTTTCGATTAAAGACCACAATTTGGAATCGCCGGTAGTTACCCGGCAATTTTTTCCGGTAGATAACGAGTCTACCAATTTTCCAAGGGCACAATGGGCTGGAATTAAATTTTGTGAATCGGAACCGCCACTTGTCAATGGATTAGTGGGGAACAAAATTGACGTGTTGCAACAACAGCCAATTAAAAAAAGCCGTCGTGGACCACGTTCAAGAAGTTCACAGTACCGTGGTGTTACCTTTTACCGGAGGACTGGCCGGTGGGAATCTCATATATGGGATTGTGGGAAACAAGTGTATTTAGGTGGATTTGATACAGCACATGCAGCAGCTCGTGCATATGATAGGGCAGCAATCAAATTCCGGGGAGCGGAGGCGGACATAAACTTTACCTCGAAAGATTATGAAGATGACTTAAAACAGATGAGCAATTTAACCAAAGAAGAATTTGTGCATGTACTAAGGAGACAAAGTACTGGTTTTCCAAGAGGAAGTTCCAAGTATAGAGGAGTCACTTTGCATAAATGTGGTAGATGGGAAGCTAGAATGGGACAATTCTTAGGCAAAAAGTATGTTTATTTAGGCCTATTTGATACTGAAGTTGAAGCTGCCAGAGCTTATGATAAAGCTGCTATCAAGTGTAATGGAAAAGATGCAGTTACCAACTTTGATCGTAGCATTTATGAAAATGAACTTAACTCAACCGAATGTACTGATAATGCAACGGACCACAATCTTGACTTAAGCTTAGGAGGTTCAAGCCAAGAAATGGGGGACAATAGGGGTCAAAATTCTTCATCTAATTTGCAATTGGATGGCCATTGGGGCCACCAAGGGTCATCAAGGCATAATAATAAGGTTCAGACTCCGAGCAGCAACAATGTAGGCCAAATTGGTGGAACAAGTAATTTTCAAAATAATTATGAGATAATTGCAACTGCTGCAGCATCATCAGGATTCCCCCAGCAGATAATAAGGACTCAAAATAATGGCTTCCATCATTATTTTATGAGACCTTGACCATTCATTAATTTCTTCATGTTCTTTTATTAATCTTTGTAAAGAGTAAAATCAATTAATGTTGAGATTATAATTAATATTCTCAAAACATAAACAAACAGATTATATTGGTTAGTATATATATGTTGGGAGGAAATTCCAACTCTTTGGAAAAGTTAAGTGTAACCTTTTTTTTTTTGTTAAATTATTATTATTATT
Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g044300.2.1 | SL2.50ch03:8777973..8782158 | 402 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g044300.2 | SL2.50ch03:8777728..8782356 | 4,629 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g044300.2.1.1 | SL2.50ch03:8777728..8778437 | 710 | + | n/a |
| exon | exon:Solyc03g044300.2.1.2 | SL2.50ch03:8778534..8778559 | 26 | + | n/a |
| exon | exon:Solyc03g044300.2.1.3 | SL2.50ch03:8778645..8778675 | 31 | + | 1 |
| exon | exon:Solyc03g044300.2.1.4 | SL2.50ch03:8778839..8778926 | 88 | + | 2 |
| exon | exon:Solyc03g044300.2.1.5 | SL2.50ch03:8779313..8779458 | 146 | + | 1 |
| exon | exon:Solyc03g044300.2.1.6 | SL2.50ch03:8779540..8779584 | 45 | + | n/a |
| exon | exon:Solyc03g044300.2.1.7 | SL2.50ch03:8780141..8780232 | 92 | + | 1 |
| exon | exon:Solyc03g044300.2.1.8 | SL2.50ch03:8780355..8780506 | 152 | + | 1 |
| exon | exon:Solyc03g044300.2.1.9 | SL2.50ch03:8781997..8782356 | 360 | + | 2 |
| intron | intron:Solyc03g044300.2.1.1 | SL2.50ch03:8778438..8778533 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.2 | SL2.50ch03:8778560..8778644 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.3 | SL2.50ch03:8778676..8778838 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.4 | SL2.50ch03:8778927..8779312 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.5 | SL2.50ch03:8779459..8779539 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.6 | SL2.50ch03:8779585..8780140 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.7 | SL2.50ch03:8780233..8780354 | n/a | + | n/a |
| intron | intron:Solyc03g044300.2.1.8 | SL2.50ch03:8780507..8781996 | n/a | + | n/a |
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mRNA details
mRNA details

