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Solanum lycopersicum mRNA Solyc03g063220.1.1

mRNA details  
Name
Solyc03g063220.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc03g063220.1.1
Length
4,827
  
Description
Helicase SWR1 (AHRD V1 *--- A5DYP3_LODEL); contains Interpro domain(s) IPR000330 SNF2-related
Location(s)
SL2.50ch03:33669199..33687113
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005524
Length
17915
Nb exon
18
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g063220.1.1 Helicase SWR1 (AHRD V1 *--- A5DYP3_LODEL); contains Interpro domain(s) IPR000330 SNF2-related

ATGGCTTCTAAAGTGTACAAGTGTAAGCCGGACCATGAAACACGCGTACGACGCCAAAAGGGTCTTGAAGCACCTAAAGAACCTCAACGACCTAAAACACACTGGGATCATGTTCTTGAGGAGATGGTCTGGTTGTCGAAGGACTTTGAATCAGAGAGGAAGTGGAAGTTGACTCTAGCAAAGAAGGTTGCTATTCGAGCTAGCAAGGGAATGCTTGATCAGGCGACACGGGGAGAAAAGCGTGTTAAGGAAGAAGAGCAACGTCTGCGTAAAGTTGCACTCAATATTTCAAAGGACATCAAAAAATTTTGGTTGAAAATAGAGAAGCTGGTTCTTTACAAGCATCAGTTGGAGGTAGATGAGAAGAAGAAGAAAACACTTGATAAGCAGCTAGAGTTTCTTCTTGGACAAACAGAAAGGTACTCAACAATGCTTGCAGAGAATCTTGTAAGTTCACAAAGTACTTGCAAACGAACCAATTCTTTGCCTGCACCAGAAGCATTTAGAATTCAGTGTAAAGACGGGAGTGAAGGGGATGTAACAAATCGAGACTGTGTTGGAGAAAATCTTCAACCTCTTTCAACTGGTAGTGATATTGATGACGACTTCGGCGTGCAATCTGAAGACGAAATGGAAGATGACGAGCATACTATTGAAGAAGATGAGGCTGTTATAACTAAAGAAGAAAGGGAAGAAGAGTTGGCTGCTTTACAAAATGAAGTGGATCTACCTCTTGAAGAGCTCCTTAAGCGCTATGCAATTGGGGAAGCTAGCAGAGACTGTAGCCCCGAGAAGAGTGCTGCAGATGTTATAGTCAGTTCTGGCAAGGGCAGGGATAAATGTAGAGATGTTGATGTTGCTACTGAAACCGACAAAGACAGCTCACCTGCAATTTCTGGTCGTCGTTCTGTTGAAAGTAATGGGGTCTTATCAGTTCCAAATAATTATTGTTCTGACCTAGGGAAAGAGAAGCTAAGAAGTTCTCGAAAGAAGTATCAGGAGTTCGGCCAAATTAATTTGTTGGATGACTTTAATGATGAACAGGATGATGATGATTATGTCGTTGCTGTTGGTGAAGATAAAGGATACAATATGGATGATGAAACAACTTTGCTAGAGGAGGAGGAGTTGGCAAATGCAGAGGCAAATGACGCTGCTGATGAGATTGCACTGCTGCAAAAGGAGAGCGAACTTCCTTTAGATGAGCTCCTTGCTAGGTATAAAGAGGATTTTGATACTGATGAATATGTTGACGATGATTCTGAATCATATGCGTCTGCTTCTGATGAACTCCTGGATTCTCCAGCACACAATGAATCTGAACCTGTTCGAGTAAACGATGTACCATGCGATGTACTGCCCACTACAGTCGCTGAGGATGGAGAAAACGAAGTTGAAAGTGTGGATAAAACAGGGGAAGAAAAGCAGAGTGAGGATATAATTGCTGATGCAGCAGCTGCTGCCAGATCCGCACAACCAACGGGTAGCACCTTCTCAACAACCAAAGTGCGGACTAAGTTCCCCTTCCTTCTAAAATTTCCCCTTCGTGAGTATCAACATATTGGTTTGGATTGGCTTGTGACCATGTATGAGAAGAAACTTAATGGAATCCTAGCAGATGAAATGGGTTTGGGGAAGACCATCATGACCATTGCTCTTCTTGCTCACCTAGCATGTGAAAAAGGAATATGGGGTCCTCATCTTATTGTTGTCCCAACTAGTGTCATGCTAAACTGGGAGACTGAGTTTCTTAGATGGTGTCCTGCTTTCAAAATCTTGACATATTTTGGCAGTGCTAAAGAGCGAAAGATTAAAAGGCAAGGCTGGTTAAAGCCAAACTCATTTCATGTATGTATCACAACTTACAGACTCGTTATACAAGACTCCAAAGTTTTCAAGCGTAAGAAGTGGAAATACCTAATTTTAGATGAAGCTCATCTAATAAAGAATTGGAAATCGCAGAGATGGCAGACACTTCTCAACTTTAACTCAAAACGGCGTATACTTTTGACTGGTACACCATTGCAGAATGATCTCATGGAGCTGTGGTCTCTAATGCATTTCTTGATGCCTCATATTTTTCAGTCTCACCAAGAATTTAAAGATTGGTTCTGTAATCCTATTTCTGGAATGGTTGAGGGACAAGAAAAGGTTAATAAGGAAGTTGTTGATCGCTTGCATAATGTCCTTCGTCCCTTTATTCTCCGCCGTTTGAAAAGGGATGTGGAGAAGCAGCTTCCTTCAAAACATGAGCACGTAATTTATTGTAAGCTCTCGAGGAGGCAGCGTAATTTGTATGAAGACTTCATTGCTAGTTCAGAGACACAAGCCACTCTAGCTAGTTCAAATTTTTTTGGGATGATAAGTGTAATAATGCAACTTCGTAAGGTGTGCAATCATCCTGACTTATTTGAAGGACGTCCAATAGTGAGCTCCTTTGATATGAGTGGTATTGATATGCACTTGAGCTCTTCCATTTGCTCGATGCTTTCACCTGGTATATTTTCAACTATCAACCTTGGTGCTTTGGGGTTGTTGTTTACACATCTTGATTTTTCAATGACGTCTTGGGAGAGTAATGATGTTCAATCCATGGCTACCCCGTCAAGCTTGATTGAGGGTCGTGTGTCTCTGATTCATGATGAAGAAACTTCTCTAGGACTTAAACGGAATAAGAAGTTTCATGGAACAAACATATTTGAGGAGATCCAAAAGGCACTTGCTGAGGAGAGACTGAGAGAAGCAAAGGAGAGAGCAGCAGCTATTGCACGGTGGAATTCCATAAAGTGTAAGCAGAAACCTGTATATTCTACAAGTCTTCGGGAGATTGTTACTGTGAAAAATCCAGTTCATGGCATTTACTGTCAAAAAAGTAATCCCATGTCATTTTTGTACTCCGCTAGGCTTGCGGAATCAATACTGACACCAGTTGAGAGATTCCAACAAATGGTTGATCAGGTTGAGACATTCATGTTTGCAATTCCTGCTGCACGTTCCCCAGCACCTGCTTGCTGGTGCAGTAAACCAGGAACTGCCATATTTTTCAGTCCAACCTTTAAGGAGACATGTTCTGAGGTTCTTTCTCCTCTTCTCACTCCTTTTCGCCCAGCCATTGTTAGAAGGCAAGTCTACTTTCCAGATAGGCGGCTTATACAATTTGACTGTGGAAAGCTGCAGGAGCTTGCAGGTTTATTGAGGCGTTTAAAATCAGAAGGTCACCGTGCATTAATTTTCACCCAGATGACAAAGATGCTTGATGTTTTAGAAGCTTTCATTAATTTGTATGGTTACACTTACATGCGTTTGGATGGTTCTACTCCGCCAGAAGAGAGACAAACTTTGATGCAACGTTTCAACACGAATCCAAAGATTTTCCTGTTTATTTTATCAACCCGTAGTGGTGGAGTTGGCATCAACTTGGTGGGTGCAGACACAGTCATCTTTTATGATAGTGACTGGAACCCAGCTATGGATCAACAAGCTCAAGATCGCTGTCATAGAATAGGCCAGACCCGTGAAGTACACATTTATCGATTGATAAGTGAGAGTACCATTGAAGAGAATATTTTGAAAAAGGCAAACCAGAAGCGTGCTCTGGATGATTTGGTTATACAGAGTGGAAGTTACAACACTGAATTCTTCAAGAAACTAGATCCAATGGAATTGTTCTCCGGCCACAGAACAGTTTCCTTAAAGAATATTGAAGTAGTGAAGAACAGCAATGTCACTGAGGTTCAGCTTTCTAATGCTGACGTTGAGGCTGCTTTGCAAAATGTAGAAGATGAGGCAGATTACATGGCTCTGAAGAAAGTTGAAGAGGAAGAGGCAGTAGACAATCAGGAGTTCACTGAAGAAGCAATTGTCAGGTTGGAAGATGATGAACTTGGTAATGATGATGAGACGAAGGCTGATGAGCATGCTGATCATGAAGTGCCAGTTACAACATTGAGTAAAGAACTTGTGGCAACGTCAAATGTTAGCAATCCATTAAAAGAACAAGCAATTACTTTTGCTAGTAAAGAAGATGACATTGACATGCTGGCTGATGTCAAACAGATGGCAGCAGCAGCAGCTGCTGCCGGACAAGCTATCTTGTCTTTCGAGAGTCAGCTACGTCCAATTGATCGGTATGCTGTACGTTTTCTGGAGTTATGGGACCCTATCATAGACAAGACAGCTATCGAGTCACAAGGTCATTTTGAAGAAACTGAATGGGAATTGGATAGAATTGAAAAGTTGAAGGAAGATATGGAAGCAGAGATTGATGATGATGAAGAGCCTTTAGTTTACGAGAGTTGGGATACTGATTATGCAACTGAGGCATACAGACAACAGGTTGAGACTTTGGCAAAGCATCAGTTGAAGGAGGAGCTGGAAGCTGAAGCCAAAGAGAAAGAGCTTGCGGAATATGAGAACTCCATGGGCTTACCTACTTACTACATGGCCCTGCTCCCTATGCCAACTGAGGTTATAGAACGGATTGACAAGATAAGAAGGGACTTCCTCTGGAAAGGCAACAGGGAGAAACACAAATTTCTTCTCATCAAATGGGAGAAGGTCACACAACCAAAATACCAAGGAAGTCTTGGCGTTAAGAACCTTGCAGTCCACAACAAAAGCATGATGGTGAATTGGCTTTGGAGATACAACTTGGAAGACGAAGGGCTCTGGAATGAGGTTATTATGGCCAAGCATGGAAGGTTGAATCAATGGTGGACAAATATTACTCACTTCCTTACTGAGTGGGACGGTGGAAGAGTATTAGGATGTTGTGTAACACATTTGATTGGAACGCTTACTTTGAATTGGGTTTTTGTTTACTCCTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g063220.1.1SL2.50ch03:33669198..336871131,609-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g063220.1SL2.50ch03:33669199..3368711317,915-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g063220.1.1.1SL2.50ch03:33687054..3368711360-n/a
exonexon:Solyc03g063220.1.1.10SL2.50ch03:33674956..3367502368-2
exonexon:Solyc03g063220.1.1.11SL2.50ch03:33674733..33674867135-n/a
exonexon:Solyc03g063220.1.1.12SL2.50ch03:33674180..3367423051-n/a
exonexon:Solyc03g063220.1.1.13SL2.50ch03:33673925..3367399369-n/a
exonexon:Solyc03g063220.1.1.14SL2.50ch03:33673711..3367377363-n/a
exonexon:Solyc03g063220.1.1.15SL2.50ch03:33670569..336736353,067-n/a
exonexon:Solyc03g063220.1.1.16SL2.50ch03:33670059..3367012365-2
exonexon:Solyc03g063220.1.1.17SL2.50ch03:33669834..3366989865-n/a
exonexon:Solyc03g063220.1.1.18SL2.50ch03:33669199..33669601403-1
exonexon:Solyc03g063220.1.1.2SL2.50ch03:33685161..3368524181-n/a
exonexon:Solyc03g063220.1.1.3SL2.50ch03:33684959..33685066108-n/a
exonexon:Solyc03g063220.1.1.4SL2.50ch03:33684749..3368482981-n/a
exonexon:Solyc03g063220.1.1.5SL2.50ch03:33684570..3368465889-n/a
exonexon:Solyc03g063220.1.1.6SL2.50ch03:33678215..33678366152-1
exonexon:Solyc03g063220.1.1.7SL2.50ch03:33678063..3367812462-2
exonexon:Solyc03g063220.1.1.8SL2.50ch03:33675759..33675894136-n/a
exonexon:Solyc03g063220.1.1.9SL2.50ch03:33675108..3367517972-2
intronintron:Solyc03g063220.1.1.10SL2.50ch03:33675024..33675107n/a-n/a
intronintron:Solyc03g063220.1.1.11SL2.50ch03:33674868..33674955n/a-n/a
intronintron:Solyc03g063220.1.1.12SL2.50ch03:33674231..33674732n/a-n/a
intronintron:Solyc03g063220.1.1.13SL2.50ch03:33673994..33674179n/a-n/a
intronintron:Solyc03g063220.1.1.14SL2.50ch03:33673774..33673924n/a-n/a
intronintron:Solyc03g063220.1.1.15SL2.50ch03:33673636..33673710n/a-n/a
intronintron:Solyc03g063220.1.1.16SL2.50ch03:33670124..33670568n/a-n/a
intronintron:Solyc03g063220.1.1.17SL2.50ch03:33669899..33670058n/a-n/a
intronintron:Solyc03g063220.1.1.18SL2.50ch03:33669602..33669833n/a-n/a
intronintron:Solyc03g063220.1.1.2SL2.50ch03:33685242..33687053n/a-n/a
intronintron:Solyc03g063220.1.1.3SL2.50ch03:33685067..33685160n/a-n/a
intronintron:Solyc03g063220.1.1.4SL2.50ch03:33684830..33684958n/a-n/a
intronintron:Solyc03g063220.1.1.5SL2.50ch03:33684659..33684748n/a-n/a
intronintron:Solyc03g063220.1.1.6SL2.50ch03:33678367..33684569n/a-n/a
intronintron:Solyc03g063220.1.1.7SL2.50ch03:33678125..33678214n/a-n/a
intronintron:Solyc03g063220.1.1.8SL2.50ch03:33675895..33678062n/a-n/a
intronintron:Solyc03g063220.1.1.9SL2.50ch03:33675180..33675758n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17759278%2Fdetails feature 17759278
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