Solanum lycopersicum mRNA Solyc03g078000.2.1
 mRNA details
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| Name | Type |
Length
1,969
|
Organism |
|
Description
High-affinity fructose transporter ght6 (AHRD V1 **** GHT6_SCHPO); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
|
|
Location(s)
SL2.50ch03:48840499..48845063
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- GO:0016021
- Length
- 4565
- Nb exon
- 14
- Sifter term
- GO:0005353
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g078000.2.1 High-affinity fructose transporter ght6 (AHRD V1 **** GHT6_SCHPO); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
TAATACAGGAGAGACAGTCCACAGACATACAAAGATTAGGCCAACAGATATCTGGAGCAATTCAAAAAGCCAAGGACCTTCCCTCTATATTTAATACTGGTGCATAAATGGGTTGGTATAATCCGACAATGACACTCTCAAAACCACCGTTGCTAGTCCCATCCAACTCGTGGGTTTTGAGGAGTAAGAAGGTAACTGAATGTAGAAGAAATTACCCATTGATTGGAAGGAAGCAGGAAAAATTAGTGGGTATACATTTTGTGGGTCGTAAGGGAATGCTCAGACTGAAGGTTTCGGCATCTTCAGGAGAAGGAGAAGAAGCCGAGTCAGGGTATATAGAGGAATTCAGTTGGTCTTCTGTTATTTTGCCTTTTTTCTTCCCAGCCCTAGGCGGTTTATTATTTGGCTACGATATTGGTGCCACATCAGGTGCTACCATCTCATTGCAGTCGCCTGAGCTTAGTGGAATGAGTTGGTACAACCTCTCAGCTGTTCAGCTTGGTCTTGTGGTCAGCGGTTCCCTTTATGGGGCTCTTATTGGCTCCATACTCGCCTACCCATTTGCTGATTTCCTAGGAAGGAGTAGGGAACTGATCATAGCAGCCATTTTATATTTAGCTGGCGGTTCACTAACTGCCTGTGCTCCAGGACTAGGGGCACTCTTGTTGGGTCGGCTTGTTTATGGACTAGGAATTGGCTTGGCAATGCATGGAGCACCTCTATATATAGCGGAGACTTGTCCATCCCAAATCAGAGGGACATTAATCTCTTTAAAGGAGCTGGCAATAGTACTCGGTATTTTGCTTGGTTATTTTGTAGGTAGTTATGAAATTGATGTCATTGGAGGGTGGCGTTACATGTTTGGATTTAGTGCTCCAATTGCTTTATTGATGGGGTTTGGCATGTGGACACTCCCACCCTCTCCCAGATGGTTACTTCTGAGGGCAATTCAAGGTAAAGGACCATTGCAGGAATACAAACAGAAGGCTATTGGAGCATTGAGCAAACTGAGAGGCCGCCCTGATGGCGATAAAATATCTGAAAAACAAATAGAAGATACTATTATATCATTGAAAACTGCCTACACAGATGAAGAAGCTGAAGGAAATTTTCTTGAGGTATTGCAAGGACCAAGTTTGAAAGCATTTACAATTGGAGGAGGTTTGGTCCTTTTTCAACAGATAACTGGACAGCCAAGCGTTCTGTATTATGCTGGTTCAATTCTTCAGAGTGCTGGTTTTTCTGCGGCTGCAGATGCTGCTCGAGTTTCAGTCGTTATTGGTATATTCAAGTCACTGATGACAGCAGTCGCTGTCCTAAAAGCTGATGATCTTGGGAGAAGGCCATTGTTGATTGGAGGAGTCAGTGGGATTGCCCTATCATTGTTTCTTCTTTCAGCTTATTATAAATTTCTCGGCAGTTACCCTTTCGTTGCTGTTTCTGCTCTGCTTCTCTATGTGGGATGCTACCAGATATCTTTTGGGCCTATTAGCTGGCTTATGGTATCAGAGATTTTCCCACTCCGCACCAGAGGGAAGGGGATTAGTCTTGCTGTTCTTACCAATTTTGGTTCTAATGCGATAGTGACCTTTGCTTTTTCACCTCTCAAGGAGTTGCTTGGGGCAGAAAATCTTTTCCTTCTATTTGGAGTGATTGCTTTATTGTCACTTGTGTTTGTGGTCACCTCTGTTCCAGAGACTAAAGGCTTGACCTTGGAAGAGATTGAGTCCAAAATCTTGAAGTGAAGACATAGTTTTGTGTCCTTGAGATCCTCACAAATAGAATAATTGTCTCTTCTTTAATATATCAATTCTATCAGAATACAATGCTGCAAACTTGTATCTAATATTTTGATGACTTCGCGATTCTGCTACTGTTTGGCGATTCTTCTTGTGCTACTCTGTATATATTGTTTTTGTTGCCACTCTGACTTGGCGAAGCAAAAGTGGGGACATAACATTATAGCTGC
TAATACAGGAGAGACAGTCCACAGACATACAAAGATTAGGCCAACAGATATCTGGAGCAATTCAAAAAGCCAAGGACCTTCCCTCTATATTTAATACTGGTGCATAAATGGGTTGGTATAATCCGACAATGACACTCTCAAAACCACCGTTGCTAGTCCCATCCAACTCGTGGGTTTTGAGGAGTAAGAAGGTAACTGAATGTAGAAGAAATTACCCATTGATTGGAAGGAAGCAGGAAAAATTAGTGGGTATACATTTTGTGGGTCGTAAGGGAATGCTCAGACTGAAGGTTTCGGCATCTTCAGGAGAAGGAGAAGAAGCCGAGTCAGGGTATATAGAGGAATTCAGTTGGTCTTCTGTTATTTTGCCTTTTTTCTTCCCAGCCCTAGGCGGTTTATTATTTGGCTACGATATTGGTGCCACATCAGGTGCTACCATCTCATTGCAGTCGCCTGAGCTTAGTGGAATGAGTTGGTACAACCTCTCAGCTGTTCAGCTTGGTCTTGTGGTCAGCGGTTCCCTTTATGGGGCTCTTATTGGCTCCATACTCGCCTACCCATTTGCTGATTTCCTAGGAAGGAGTAGGGAACTGATCATAGCAGCCATTTTATATTTAGCTGGCGGTTCACTAACTGCCTGTGCTCCAGGACTAGGGGCACTCTTGTTGGGTCGGCTTGTTTATGGACTAGGAATTGGCTTGGCAATGCATGGAGCACCTCTATATATAGCGGAGACTTGTCCATCCCAAATCAGAGGGACATTAATCTCTTTAAAGGAGCTGGCAATAGTACTCGGTATTTTGCTTGGTTATTTTGTAGGTAGTTATGAAATTGATGTCATTGGAGGGTGGCGTTACATGTTTGGATTTAGTGCTCCAATTGCTTTATTGATGGGGTTTGGCATGTGGACACTCCCACCCTCTCCCAGATGGTTACTTCTGAGGGCAATTCAAGGTAAAGGACCATTGCAGGAATACAAACAGAAGGCTATTGGAGCATTGAGCAAACTGAGAGGCCGCCCTGATGGCGATAAAATATCTGAAAAACAAATAGAAGATACTATTATATCATTGAAAACTGCCTACACAGATGAAGAAGCTGAAGGAAATTTTCTTGAGGTATTGCAAGGACCAAGTTTGAAAGCATTTACAATTGGAGGAGGTTTGGTCCTTTTTCAACAGATAACTGGACAGCCAAGCGTTCTGTATTATGCTGGTTCAATTCTTCAGAGTGCTGGTTTTTCTGCGGCTGCAGATGCTGCTCGAGTTTCAGTCGTTATTGGTATATTCAAGTCACTGATGACAGCAGTCGCTGTCCTAAAAGCTGATGATCTTGGGAGAAGGCCATTGTTGATTGGAGGAGTCAGTGGGATTGCCCTATCATTGTTTCTTCTTTCAGCTTATTATAAATTTCTCGGCAGTTACCCTTTCGTTGCTGTTTCTGCTCTGCTTCTCTATGTGGGATGCTACCAGATATCTTTTGGGCCTATTAGCTGGCTTATGGTATCAGAGATTTTCCCACTCCGCACCAGAGGGAAGGGGATTAGTCTTGCTGTTCTTACCAATTTTGGTTCTAATGCGATAGTGACCTTTGCTTTTTCACCTCTCAAGGAGTTGCTTGGGGCAGAAAATCTTTTCCTTCTATTTGGAGTGATTGCTTTATTGTCACTTGTGTTTGTGGTCACCTCTGTTCCAGAGACTAAAGGCTTGACCTTGGAAGAGATTGAGTCCAAAATCTTGAAGTGAAGACATAGTTTTGTGTCCTTGAGATCCTCACAAATAGAATAATTGTCTCTTCTTTAATATATCAATTCTATCAGAATACAATGCTGCAAACTTGTATCTAATATTTTGATGACTTCGCGATTCTGCTACTGTTTGGCGATTCTTCTTGTGCTACTCTGTATATATTGTTTTTGTTGCCACTCTGACTTGGCGAAGCAAAAGTGGGGACATAACATTATAGCTGC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g078000.2.1 | SL2.50ch03:48840605..48844839 | 546 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g078000.2 | SL2.50ch03:48840499..48845063 | 4,565 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g078000.2.1.1 | SL2.50ch03:48840499..48840788 | 290 | + | n/a |
| exon | exon:Solyc03g078000.2.1.10 | SL2.50ch03:48842736..48842798 | 63 | + | n/a |
| exon | exon:Solyc03g078000.2.1.11 | SL2.50ch03:48842942..48843022 | 81 | + | n/a |
| exon | exon:Solyc03g078000.2.1.12 | SL2.50ch03:48843144..48843242 | 99 | + | n/a |
| exon | exon:Solyc03g078000.2.1.13 | SL2.50ch03:48844492..48844629 | 138 | + | n/a |
| exon | exon:Solyc03g078000.2.1.14 | SL2.50ch03:48844705..48845063 | 359 | + | n/a |
| exon | exon:Solyc03g078000.2.1.2 | SL2.50ch03:48840874..48840953 | 80 | + | n/a |
| exon | exon:Solyc03g078000.2.1.3 | SL2.50ch03:48841256..48841334 | 79 | + | n/a |
| exon | exon:Solyc03g078000.2.1.4 | SL2.50ch03:48841414..48841473 | 60 | + | 1 |
| exon | exon:Solyc03g078000.2.1.5 | SL2.50ch03:48841571..48841637 | 67 | + | n/a |
| exon | exon:Solyc03g078000.2.1.6 | SL2.50ch03:48841718..48841842 | 125 | + | n/a |
| exon | exon:Solyc03g078000.2.1.7 | SL2.50ch03:48841956..48842057 | 102 | + | 2 |
| exon | exon:Solyc03g078000.2.1.8 | SL2.50ch03:48842130..48842507 | 378 | + | n/a |
| exon | exon:Solyc03g078000.2.1.9 | SL2.50ch03:48842611..48842658 | 48 | + | n/a |
| intron | intron:Solyc03g078000.2.1.1 | SL2.50ch03:48840789..48840873 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.10 | SL2.50ch03:48842799..48842941 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.11 | SL2.50ch03:48843023..48843143 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.12 | SL2.50ch03:48843243..48844491 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.13 | SL2.50ch03:48844630..48844704 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.2 | SL2.50ch03:48840954..48841255 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.3 | SL2.50ch03:48841335..48841413 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.4 | SL2.50ch03:48841474..48841570 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.5 | SL2.50ch03:48841638..48841717 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.6 | SL2.50ch03:48841843..48841955 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.7 | SL2.50ch03:48842058..48842129 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.8 | SL2.50ch03:48842508..48842610 | n/a | + | n/a |
| intron | intron:Solyc03g078000.2.1.9 | SL2.50ch03:48842659..48842735 | n/a | + | n/a |
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