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Solanum lycopersicum mRNA Solyc03g078000.2.1

mRNA details  
Name
Solyc03g078000.2.1
Type
mRNA
Length
1,969
Organism
Solanum lycopersicum
Description
High-affinity fructose transporter ght6 (AHRD V1 **** GHT6_SCHPO); contains Interpro domain(s) IPR003663 Sugar/inositol transporter
Location(s)
SL2.50ch03:48840499..48845063
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0016021
Length
4565
Nb exon
14
Sifter term
GO:0005353
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g078000.2.1 High-affinity fructose transporter ght6 (AHRD V1 **** GHT6_SCHPO); contains Interpro domain(s) IPR003663 Sugar/inositol transporter

TAATACAGGAGAGACAGTCCACAGACATACAAAGATTAGGCCAACAGATATCTGGAGCAATTCAAAAAGCCAAGGACCTTCCCTCTATATTTAATACTGGTGCATAAATGGGTTGGTATAATCCGACAATGACACTCTCAAAACCACCGTTGCTAGTCCCATCCAACTCGTGGGTTTTGAGGAGTAAGAAGGTAACTGAATGTAGAAGAAATTACCCATTGATTGGAAGGAAGCAGGAAAAATTAGTGGGTATACATTTTGTGGGTCGTAAGGGAATGCTCAGACTGAAGGTTTCGGCATCTTCAGGAGAAGGAGAAGAAGCCGAGTCAGGGTATATAGAGGAATTCAGTTGGTCTTCTGTTATTTTGCCTTTTTTCTTCCCAGCCCTAGGCGGTTTATTATTTGGCTACGATATTGGTGCCACATCAGGTGCTACCATCTCATTGCAGTCGCCTGAGCTTAGTGGAATGAGTTGGTACAACCTCTCAGCTGTTCAGCTTGGTCTTGTGGTCAGCGGTTCCCTTTATGGGGCTCTTATTGGCTCCATACTCGCCTACCCATTTGCTGATTTCCTAGGAAGGAGTAGGGAACTGATCATAGCAGCCATTTTATATTTAGCTGGCGGTTCACTAACTGCCTGTGCTCCAGGACTAGGGGCACTCTTGTTGGGTCGGCTTGTTTATGGACTAGGAATTGGCTTGGCAATGCATGGAGCACCTCTATATATAGCGGAGACTTGTCCATCCCAAATCAGAGGGACATTAATCTCTTTAAAGGAGCTGGCAATAGTACTCGGTATTTTGCTTGGTTATTTTGTAGGTAGTTATGAAATTGATGTCATTGGAGGGTGGCGTTACATGTTTGGATTTAGTGCTCCAATTGCTTTATTGATGGGGTTTGGCATGTGGACACTCCCACCCTCTCCCAGATGGTTACTTCTGAGGGCAATTCAAGGTAAAGGACCATTGCAGGAATACAAACAGAAGGCTATTGGAGCATTGAGCAAACTGAGAGGCCGCCCTGATGGCGATAAAATATCTGAAAAACAAATAGAAGATACTATTATATCATTGAAAACTGCCTACACAGATGAAGAAGCTGAAGGAAATTTTCTTGAGGTATTGCAAGGACCAAGTTTGAAAGCATTTACAATTGGAGGAGGTTTGGTCCTTTTTCAACAGATAACTGGACAGCCAAGCGTTCTGTATTATGCTGGTTCAATTCTTCAGAGTGCTGGTTTTTCTGCGGCTGCAGATGCTGCTCGAGTTTCAGTCGTTATTGGTATATTCAAGTCACTGATGACAGCAGTCGCTGTCCTAAAAGCTGATGATCTTGGGAGAAGGCCATTGTTGATTGGAGGAGTCAGTGGGATTGCCCTATCATTGTTTCTTCTTTCAGCTTATTATAAATTTCTCGGCAGTTACCCTTTCGTTGCTGTTTCTGCTCTGCTTCTCTATGTGGGATGCTACCAGATATCTTTTGGGCCTATTAGCTGGCTTATGGTATCAGAGATTTTCCCACTCCGCACCAGAGGGAAGGGGATTAGTCTTGCTGTTCTTACCAATTTTGGTTCTAATGCGATAGTGACCTTTGCTTTTTCACCTCTCAAGGAGTTGCTTGGGGCAGAAAATCTTTTCCTTCTATTTGGAGTGATTGCTTTATTGTCACTTGTGTTTGTGGTCACCTCTGTTCCAGAGACTAAAGGCTTGACCTTGGAAGAGATTGAGTCCAAAATCTTGAAGTGAAGACATAGTTTTGTGTCCTTGAGATCCTCACAAATAGAATAATTGTCTCTTCTTTAATATATCAATTCTATCAGAATACAATGCTGCAAACTTGTATCTAATATTTTGATGACTTCGCGATTCTGCTACTGTTTGGCGATTCTTCTTGTGCTACTCTGTATATATTGTTTTTGTTGCCACTCTGACTTGGCGAAGCAAAAGTGGGGACATAACATTATAGCTGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g078000.2.1SL2.50ch03:48840605..48844839546+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g078000.2SL2.50ch03:48840499..488450634,565+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g078000.2.1.1SL2.50ch03:48840499..48840788290+n/a
exonexon:Solyc03g078000.2.1.10SL2.50ch03:48842736..4884279863+n/a
exonexon:Solyc03g078000.2.1.11SL2.50ch03:48842942..4884302281+n/a
exonexon:Solyc03g078000.2.1.12SL2.50ch03:48843144..4884324299+n/a
exonexon:Solyc03g078000.2.1.13SL2.50ch03:48844492..48844629138+n/a
exonexon:Solyc03g078000.2.1.14SL2.50ch03:48844705..48845063359+n/a
exonexon:Solyc03g078000.2.1.2SL2.50ch03:48840874..4884095380+n/a
exonexon:Solyc03g078000.2.1.3SL2.50ch03:48841256..4884133479+n/a
exonexon:Solyc03g078000.2.1.4SL2.50ch03:48841414..4884147360+1
exonexon:Solyc03g078000.2.1.5SL2.50ch03:48841571..4884163767+n/a
exonexon:Solyc03g078000.2.1.6SL2.50ch03:48841718..48841842125+n/a
exonexon:Solyc03g078000.2.1.7SL2.50ch03:48841956..48842057102+2
exonexon:Solyc03g078000.2.1.8SL2.50ch03:48842130..48842507378+n/a
exonexon:Solyc03g078000.2.1.9SL2.50ch03:48842611..4884265848+n/a
intronintron:Solyc03g078000.2.1.1SL2.50ch03:48840789..48840873n/a+n/a
intronintron:Solyc03g078000.2.1.10SL2.50ch03:48842799..48842941n/a+n/a
intronintron:Solyc03g078000.2.1.11SL2.50ch03:48843023..48843143n/a+n/a
intronintron:Solyc03g078000.2.1.12SL2.50ch03:48843243..48844491n/a+n/a
intronintron:Solyc03g078000.2.1.13SL2.50ch03:48844630..48844704n/a+n/a
intronintron:Solyc03g078000.2.1.2SL2.50ch03:48840954..48841255n/a+n/a
intronintron:Solyc03g078000.2.1.3SL2.50ch03:48841335..48841413n/a+n/a
intronintron:Solyc03g078000.2.1.4SL2.50ch03:48841474..48841570n/a+n/a
intronintron:Solyc03g078000.2.1.5SL2.50ch03:48841638..48841717n/a+n/a
intronintron:Solyc03g078000.2.1.6SL2.50ch03:48841843..48841955n/a+n/a
intronintron:Solyc03g078000.2.1.7SL2.50ch03:48842058..48842129n/a+n/a
intronintron:Solyc03g078000.2.1.8SL2.50ch03:48842508..48842610n/a+n/a
intronintron:Solyc03g078000.2.1.9SL2.50ch03:48842659..48842735n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17760650%2Fdetails feature 17760650
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