Solanum lycopersicum mRNA Solyc03g093230.2.1
 mRNA details
|
| Name | Type |
Length
971
|
Organism |
|
Description
Aquaporin (AHRD V1 ***- Q39956_HELAN); contains Interpro domain(s) IPR000425 Major intrinsic protein
|
|
Location(s)
SL2.50ch03:54425062..54426376
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| Ontology term(s) |
|
GFF source
ITAG_eugene
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- Interpro2go term
- GO:0016020
- Length
- 1315
- Sifter term
- GO:0015250
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g093230.2.1 Aquaporin (AHRD V1 ***- Q39956_HELAN); contains Interpro domain(s) IPR000425 Major intrinsic protein
TGAGATTTAGAGCCAATTGAACTTCTCTTAGTTAATTCAATTCTTCTGATAAGACTAGTATCAATTAATGGCGTCTCTTGCTTCCCGCTTGCAACACTCTGTCACTCCCAATGCCCTCAGATCCTATCTCGCTGAGTTTCTCTCAACTTTCTTTTTCGTCTTTGCCGCTGCCGGTGCTTCCATGTCCACCAGGAAAATGGTGCCTGATGCGACATCAGATCCATCTAGCCTGGTGGCAATTGCAGTTGCAAATGCATTTGCTTTGTCCGTTGCAGTGTATATATCAGCCAATATCTCTGGAGGGCACGTGAATCCCGCTGTCACGTTTGGAATGGCCGTAGGAGGCCATATAAGTATTCCCATGTCTATATTCTACTGGATTTCTCAAATGATTGGTTCTGTCACCGCTTGCCTTCTTCTCAAATTCACTAATCAGCAAGTCCCAACACATGGAATTCCCCAAGAGATGACTGGTTTTGGAGCAGCAGTACTCGAAGGCGTGATGACATTTGGTCTAGTGTACACAGTTTATGCAGCTGCTGATCCTAGGAGGTGCGTCCATGCAGCGATTGGGCCGTTGGCAATTGGCCTGATGTTGGGAGCAAACGTCATGGCTTCGGGGCCATTTACTGGGGGATCGATGAACCCTGCTTACTCATTTGGCTCTGCTGTTGTCAAAGGGAGCTTCGGGAATCAAGCAGTGTACTGGATTGGACCTTTCATTGGTGCAGCTATAGCAGGACTTGTGTATGATAATGTGGTCTTCCCTTTACAAGTGACTGAGTCTTTGAGGGGAATAGGTGGTGGAATTGTTGCTGTTTAAGTACTGCATTTTTATTTTTATTTTGCTATTGTTGTGTGTGTATGTATGTATTACTTCTTGTTAGTCTATAAAATAGGATGTTGTTGCCTTCTCTTTATTAGAGCTTAATCATACACTAGTTAGTTGTTTTTGTGAATTAAGGTTCTTC
TGAGATTTAGAGCCAATTGAACTTCTCTTAGTTAATTCAATTCTTCTGATAAGACTAGTATCAATTAATGGCGTCTCTTGCTTCCCGCTTGCAACACTCTGTCACTCCCAATGCCCTCAGATCCTATCTCGCTGAGTTTCTCTCAACTTTCTTTTTCGTCTTTGCCGCTGCCGGTGCTTCCATGTCCACCAGGAAAATGGTGCCTGATGCGACATCAGATCCATCTAGCCTGGTGGCAATTGCAGTTGCAAATGCATTTGCTTTGTCCGTTGCAGTGTATATATCAGCCAATATCTCTGGAGGGCACGTGAATCCCGCTGTCACGTTTGGAATGGCCGTAGGAGGCCATATAAGTATTCCCATGTCTATATTCTACTGGATTTCTCAAATGATTGGTTCTGTCACCGCTTGCCTTCTTCTCAAATTCACTAATCAGCAAGTCCCAACACATGGAATTCCCCAAGAGATGACTGGTTTTGGAGCAGCAGTACTCGAAGGCGTGATGACATTTGGTCTAGTGTACACAGTTTATGCAGCTGCTGATCCTAGGAGGTGCGTCCATGCAGCGATTGGGCCGTTGGCAATTGGCCTGATGTTGGGAGCAAACGTCATGGCTTCGGGGCCATTTACTGGGGGATCGATGAACCCTGCTTACTCATTTGGCTCTGCTGTTGTCAAAGGGAGCTTCGGGAATCAAGCAGTGTACTGGATTGGACCTTTCATTGGTGCAGCTATAGCAGGACTTGTGTATGATAATGTGGTCTTCCCTTTACAAGTGACTGAGTCTTTGAGGGGAATAGGTGGTGGAATTGTTGCTGTTTAAGTACTGCATTTTTATTTTTATTTTGCTATTGTTGTGTGTGTATGTATGTATTACTTCTTGTTAGTCTATAAAATAGGATGTTGTTGCCTTCTCTTTATTAGAGCTTAATCATACACTAGTTAGTTGTTTTTGTGAATTAAGGTTCTTC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g093230.2.1 | SL2.50ch03:54425128..54426228 | 252 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g093230.2 | SL2.50ch03:54425062..54426376 | 1,315 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g093230.2.1.1 | SL2.50ch03:54425062..54425252 | 191 | + | n/a |
| exon | exon:Solyc03g093230.2.1.2 | SL2.50ch03:54425340..54425584 | 245 | + | n/a |
| exon | exon:Solyc03g093230.2.1.3 | SL2.50ch03:54425842..54426376 | 535 | + | 2 |
| intron | intron:Solyc03g093230.2.1.1 | SL2.50ch03:54425253..54425339 | n/a | + | n/a |
| intron | intron:Solyc03g093230.2.1.2 | SL2.50ch03:54425585..54425841 | n/a | + | n/a |
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