Solanum lycopersicum mRNA Solyc03g097820.1.1

mRNA details  
Name
Solyc03g097820.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc03g097820.1.1
Length
993
  
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch03:60145373..60147522
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2150
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g097820.1.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGGCTGCTTTTTCATCACACCAATTACAACACAATAACCCATTTCTTCTTGATTCAGTATTTTTGCCAACTTCTCCTATTAAAATGTCTGGCTTTTTTGAGGAACCAAACAATTCTTGTATAGTACAACAGTTTTACCAACAAGAATTCCCTTCCAATTTAATTTCTCATGAAAATAGCTTTTGCCTTGACCCTAAAAGTAGCAGCAGTATAAGCTTAGATATGGATGCTTCCTCTGTTACTGATAAAATTGAAAGTGGAATTAATAATAATAAGGCTAATGTTAGTCCTTTGGATAAGAAAAGAAAATCTAGTGAAGGGTCTTCTTCTATGACTTCTGCTCATTCTAAGAATGAGAAACAGGGTGATAATGGGAAAAAGAAGAAAATTATCAGCAAGTTAGTAGCCAAAGATGAAAAGAAAGCTAATGAAGAAGCACCAACAGGGTACATTCATGTTAGAGCAAGAAGGGGCCAGGCAACTGATAGCCATAGTCTTGCTGAAAGGGTGAGGAGAGAGAAAATAAGTGAAAGGATGAAGATATTGCAATCTCTTGTTCCTGGTTGTGACAAGGTAACTGGAAAGGCCCTTATGTTGGATGAGATAATTAATTATGTCCAATCTTTGCAAAACCAAGTTGAGTTTCTCTCAATGAAACTTACTTCTTTGAATCCAATGTACTATGACTTTGGAATGGACTTAGATGCACTCATGGTCAGACCTGATGACCAGAGTTTAAGTGGCTTGGAGACACAAATGGCAAATATTCAGCAAGGTAGCACAACTACTACATCACAGGCAGCTGAAGTTATTGCTAACACTAATAGTGGCTACCAATTTTTGGATAATTCAACATCACTCATGTTTCAACAATCCCATTTCCCTAATTCTATTCCTCAGGGTATTGGACAGCTCTTATGGGGTGCAGATGAGCAAACACAAAAAATAATAAATCAGTCTGGATTTAGCAACAACTTTTGTTCTTTCCATTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g097820.1.1SL2.50ch03:60145372..60147522331-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g097820.1SL2.50ch03:60145373..601475222,150-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g097820.1.1.1SL2.50ch03:60147172..60147522351-n/a
exonexon:Solyc03g097820.1.1.2SL2.50ch03:60146916..60147071156-n/a
exonexon:Solyc03g097820.1.1.3SL2.50ch03:60146433..6014649866-n/a
exonexon:Solyc03g097820.1.1.4SL2.50ch03:60146211..6014627969-n/a
exonexon:Solyc03g097820.1.1.5SL2.50ch03:60146018..6014610790-n/a
exonexon:Solyc03g097820.1.1.6SL2.50ch03:60145754..60145921168-n/a
exonexon:Solyc03g097820.1.1.7SL2.50ch03:60145373..6014546593-n/a
intronintron:Solyc03g097820.1.1.2SL2.50ch03:60147072..60147171n/a-n/a
intronintron:Solyc03g097820.1.1.3SL2.50ch03:60146499..60146915n/a-n/a
intronintron:Solyc03g097820.1.1.4SL2.50ch03:60146280..60146432n/a-n/a
intronintron:Solyc03g097820.1.1.5SL2.50ch03:60146108..60146210n/a-n/a
intronintron:Solyc03g097820.1.1.6SL2.50ch03:60145922..60146017n/a-n/a
intronintron:Solyc03g097820.1.1.7SL2.50ch03:60145466..60145753n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17767383%2Fdetails feature 17767383
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