Solanum lycopersicum mRNA Solyc03g098200.2.1

mRNA details  
Name
Solyc03g098200.2.1
Type
mRNA
Length
2,200
Organism
Solanum lycopersicum
Description
Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 (AHRD V1 **** PDF2_ARATH); contains Interpro domain(s) IPR002913 Lipid-binding START
Location(s)
SL2.50ch03:60543697..60546844
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
  • GO:0045449
Length
3148
Nb exon
10
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g098200.2.1 Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 (AHRD V1 **** PDF2_ARATH); contains Interpro domain(s) IPR002913 Lipid-binding START

AGTTATTGAGGGCTCAAAAGTGTAATTCTCATCCATGGAGTACGTCGGCACCGGCGGTGGTGgtgggaccagcagcggcggcggtgccgatCCTCATGACGGTTCCGATTCTCATCGGAGGAAAAAGCGTTATCATCGTCACACCGCTAATCAAATTCAAAAACTTGAAGCTATTTTTAAGGAATGTCCGCATCCAGATGAGAAGACGAGATTGCAGTTGAGTAGAGATTTGGCTTTGGCTCCTCGTCAGATTAAATTTTGGTTCCAAAATAGAAGAACTCAAATGAAGGCACAACATGAAAGAGCAGATAATTGTGCGCTTCGAGCAGAGAATGATAAAATTCGATGTGAAAATATAGCAATTAGAGAAGCTTTGAAGAATGTGATTTGCCCATCATGTGGAGGGCCTCCAGTTACTGAAGATTCATATTTTGATGAACAAAAATTGAGAATTGAAAACATGCAATTAAAAGAAGAGCTTGATAAAGTATCTAGTATTGCTGCTAAGTATATAGGGAGGCCAATTTCACAACTCCCTCCAGTGCAACCTATTCATCTATCTTCACTAGACTTGTCCATGTCTAGTTTTATTGGCCATGGCCCTAATTCCCTTGATCTTGATCTCGATCTTCTTCCTGGAAGTTCGTCAAATATGCCCAGTTTGGCCTATGCTACGTTGAATTTATCGGACATGGATAAGTCACTTATAGCTGATATTGCTGGTAATGCAATGGAGGAACTAATTAGATTGGTGCAAACTAGTGAACCTTTGTGGATGAAGTCCACAATTGATGGAAGAGATGTACTTAATTTTGACAGCTACGATCGTGTTTTCCCAAGGGCTAATAGTCATTTGAAAAATCCTAATGTTCGGATTGAGGCTTCGAGGGACTCAGGTGTTGTGACCATGAATGGTTTAGCATTGGTCGAGGTGTTTATGGATGCGAATAAATGGCATGAATTCTTTCCTACAATTGTTTCAAAGGCTAGAACGCTCGAAGTAATATCATCCGGTGTAATGGGCAGCAGAACTAGTACATTGCAATTGATGTATGAAGAATTGCAAGTGCTTTCACCATTAGTCCCAACGCGGCAATTGTATTTCCTACGGTTTTGCCAGCAGATTGAACAAGGTTCATGGGCTATTGTTGATGTTTCTTATGACATAACTCAAGAAAATCAGTTTTCTTCCACTGCTTGCAAAGTTCATAGGCTTCCATCTGGATGCTTGATACAAGATATGCCCAATGGTTACTCCAAGGTTACTTGGGTGGAACACGTAGAAGTGGAGGAGAAGGGTTTAATTCATAGACTATATAGAGATCTTATACACAGTGGATTGGCATTTGGAGCTGAGAGATGGGTTGGCACTCTTCAAAGAGTTTGTGAAAGACATGCTTGTCTCATGGTTAATAGCAACCCGTCTCATGATCACGGTGGAGCAATTCCATCGCCTGATGGGAAGAGAAGCATGATGAAACTTGCACGAAGGATGGTGAGCAATTTCTGTGCTAGCGTAAATCCATCAAATGGACACCAATGGAACACTATTTCTGGTTTGAATGAGTTTGAAGTCAGAGCCACACTTCAAAAGTGCACCGACCCCGGCCAGCCCAATGGCGTAGTCATAAGTGCAGCTGCCACAATTTGGCTACCAATTCCTCCACAACAAGTCTTCAATTTCTTCAGAGACGAACGAACTCGACCTCAGTGGGATGTTCTTTCAAACCAAAATCCAGTGCAAGAGGTTGCTCATATTGCAAATGGCTCTCATTCAGGAAACTGCATTTCTGTGCTACGGGCCTATAACACTAGTCAAAACAACATGCTGATACTCCAAGAAAGCTGCATAGACTCATCAGGGGCATTAGTAGTGTATAGTCCAGTAGATATACCAGCCATCAACATAGCGATGAGCGGTGAGGATCCCACGTATATCCCATTACTACCCTCGGGGTTCACAATATCGCCAGACGGGCGACAACTAGACACGGATGCAGCATCATGTAGCAGCAGCTCAAATGCAAGTACTATAGGAGGAGGCAGGTCAGGAGGTTCACTTATAACAGTAGTTTTCCAAATTTTAGTAAGCAGTTTGCCATCAGCAAAAATGAGTCCAGAATCAGTAAACACTGTGAATAATCTCATTGGCAGCACTGTTCACCAAATTAAATCTGCCTTGAATTGCTCCACTTCCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g098200.2.1SL2.50ch03:60543696..60546810722-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g098200.2SL2.50ch03:60543697..605468443,148-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g098200.2.1.1SL2.50ch03:60546674..60546844171-n/a
exonexon:Solyc03g098200.2.1.10SL2.50ch03:60543697..60544095399-n/a
exonexon:Solyc03g098200.2.1.2SL2.50ch03:60546449..60546566118-1
exonexon:Solyc03g098200.2.1.3SL2.50ch03:60546169..60546357189-n/a
exonexon:Solyc03g098200.2.1.4SL2.50ch03:60545604..60546071468-n/a
exonexon:Solyc03g098200.2.1.5SL2.50ch03:60545415..60545516102-n/a
exonexon:Solyc03g098200.2.1.6SL2.50ch03:60545115..60545327213-n/a
exonexon:Solyc03g098200.2.1.7SL2.50ch03:60544842..60545022181-n/a
exonexon:Solyc03g098200.2.1.8SL2.50ch03:60544489..60544757269-2
exonexon:Solyc03g098200.2.1.9SL2.50ch03:60544184..6054427390-n/a
intronintron:Solyc03g098200.2.1.10SL2.50ch03:60544096..60544183n/a-n/a
intronintron:Solyc03g098200.2.1.2SL2.50ch03:60546567..60546673n/a-n/a
intronintron:Solyc03g098200.2.1.3SL2.50ch03:60546358..60546448n/a-n/a
intronintron:Solyc03g098200.2.1.4SL2.50ch03:60546072..60546168n/a-n/a
intronintron:Solyc03g098200.2.1.5SL2.50ch03:60545517..60545603n/a-n/a
intronintron:Solyc03g098200.2.1.6SL2.50ch03:60545328..60545414n/a-n/a
intronintron:Solyc03g098200.2.1.7SL2.50ch03:60545023..60545114n/a-n/a
intronintron:Solyc03g098200.2.1.8SL2.50ch03:60544758..60544841n/a-n/a
intronintron:Solyc03g098200.2.1.9SL2.50ch03:60544274..60544488n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17767813%2Fdetails feature 17767813
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