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Solanum lycopersicum mRNA Solyc03g098280.2.1

mRNA details  
Name
Solyc03g098280.2.1
Type
mRNA
Length
3,301
Organism
Solanum lycopersicum
Description
ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi
Location(s)
SL2.50ch03:60629142..60635774
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003676
Length
6633
Nb exon
22
Sifter term
GO:0019899
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g098280.2.1 ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC); contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwi

ATGGCGAGGAAGAGGAGAAGTGAGTTACCTGGTTCAGGTGAGAGCTCTGGGTCTCAAGAAACTGTTGGGGGACAGGGTCGTGGCCAGTATCCACCCCAGCAGCAACAAGAAGCAACCACACAGACTCAACATCAAGCTGTAATGACTACTCAGCCCATTACTTGTGGAAGACCAGCTGACACATCCATGGAAGTGGGTTCCTCATCTGAGCCACCTGAGATGTCAGCTCTGCAAGTGACACAACAGTTCCAGCAACTGGCTGTGCAGCCAGAAGCAGCTGCAACCCATACAATTCCACCTGTGTCAAGCAAATCACTAAGGTTTCCGCTGCGTCCAGGGAAGGGAAAGTTTGGTCAGAGTTGCATAGTGAAAGCCAATCACTTCTTTGCTGAGCTGCCTGACAAAGACTTGCATCAGTATGATGTCACCATTACTCCAGAAGTATCTTCACGAGGGGTCAACCGTGCTGTCATGGCACAGCTGGTGCTTCTTTACCAAGAATCTCATCTTGGAAAGAGACTTCCAGCTTATGATGGAAGAAAAAGTCTATACACTGCAGGGCCCCTTCCATTTGTTCAAAAAGAGTTCAAAATCACTCTTACTGATGATGAGGATGGGCCTGGTGGTGCCAGGAGGGATAGGGAATTCAAAGTTGTGATCAAATTCGCTTCCCGAGCCGATCTTCATCACTTAGGGATGTTTTTAGAAGGGAGGCAGGCTGATGCACCCCAGGAGGCGCTGCAGGTTCTGGATATTGTGCTGCGTGAGTTGCCAACATCTAAGTATTGTCCAGTAGGTCGTTCTTTCTATTCTCCTAATTTAGGGAGACGACAACCATTGGGAGAGGGTTTAGAGAGCTGGCGGGGTTTCTATCAAAGTATTCGCCCTACACAAATGGGATTATCATTGAACATCGACATGTCTTCCACTTCCTTCATTGAGCCATTGCTGGTCGTTGATTTTGTGGCACAGCTTCTGAACCGGGATGTGTCATCTAGACCACTGTCTGATGCTGACCGTGTAAAGATCAAAAAAGCACTGAGAGGTGTGAAGGTGGAGGTTACTCATCGTGGAAATATGCGGCGGAAGTACCGCATCGCCAATTTAACATCTCAAGCAACAAGAGAGTTAACTTTCCCTGTTGATGAAAAGGGCACTTTGAAATCTGTAATTGAATATTTTCGAGAAACTTATGGGTTTGTTATTCAGCATACCCAGTGGCCTTGTCTGCAAGTTGGAAATCAGCAGAGACCTAATTACTTACCAATGGAAGTCTGCAAGATTGTAGAGGGACAAAGGTACTCAAAGCGCTTGAATGAGAAACAGATAACTGCACTTCTGAAAGTGACCTGCCAGCGCCCCCAAGAAAGGGAGCGTGATATTCTTGAGACTGTGAAGCATAATGCCTATGCTGAGGACAAATATGCGAAGGAGTTTGGCATTAAGATTAGCGACAAGTTGGCACAAGTTGAGGCTCGTATTTTGCCTCCACCTTGGCTTAAATATCACGATAATGGCCGAGAAAAAGATTGTCTGCCACAAGTTGGCCAATGGAACATGATGAACAAGAAAATGGTTAATGGAGGAACTGTTGCCAATTGGATCTGCATAAACTTTTCTCGCAATGTGCAAGACACTGTTGCACATGGGTTTTGTTCTGAGCTTGCACAAATGTGTGGAATATCTGGAATGAACTTCAACCCGAATCCTGTTCTGCCTCCTGTAAGTGCACGCCCTGATCAGGTTGAGAGAGTTTTGAAAACTCGATTTCATGATGCCATGACAAAGCTGCAGCCGCTATCGAAGGAGCTTGATCTCCTGGTCGCTATCTTGCCAGACAATAATGGCTCTCTTTATGGTGATCTGAAACGGATTTGTGAGACTGACCTTGGAGTTGTTTCACAGTGCTGTTTGACAAAACATGTATTTAAGATGAGCAAACAGTATCTAGCCAATGTAGCACTGAAAATTAATGTTAAGGTGGGAGGAAGAAACACTGTGCTAGTTGATGCAATATCTAGGCGAATTCCCCTTGTCAGCGACCGTCCTACAATCATTTTTGGTGCAGATGTCACCCATCCCCACCCTGGAGAGGACTCTAGCCCATCCATTGCTGCGGTGGTTGCTTCTCAAGATTGGCCTGAGATTACTAAGTATGCTGGTCTAGTTTCTGCTCAAGCCCATAGGCAAGAGCTTATTCAGGATCTGTACACAACTAGGCAAGATCCTGTTAAAGGGACTGTGTCCGGCGGCATGATTAAGGACTTACTTATCTCCTTCCGAAGAGCTACTGGGCAAAAACCTCAGAGAATCATTTTCTACAGGGATGGTGTTAGTGAAGGGCAATTTTATCAAGTTCTTCTTTATGAACTTGATGCCATACGTAAGGCATGTGCATCATTGGAGCCAAATTATCAGCCTCCAGTTACATTTGTTGTGGTTCAGAAACGTCATCATACTAGACTTTTTGCTAACAACCACCGTGATAGAAATGCTGTTGATCGGAGCGGGAACATTATACCTGGTACTGTTGTTGATTCGAAGATTTGCCACCCAACAGAGTTTGATTTCTATCTTTGTAGTCATGCTGGCATACAGGGTACGAGTCGTCCAGCTCATTACCATGTTCTATGGGACGAGAACAAGTTTTCAGCTGATGGACTGCAGTCATTGACAAACAACCTGTGCTATACATATGCAAGGTGCACACGCTCAGTCTCCATTGTCCCTCCGGCCTATTATGCACATTTGGCAGCTTTTCGTGCTCGTTTCTATATGGAGCCTGAGACATCAGACGGTGGATCAGTAACAAGCGGAGCTGCTGGCAGAGGGGTTGGTGCAGGAGCTGCTGGAAAGAATACACGAGCACCAGGTGCAGGTTCTGCTGTTAGACCTCTTCCTGCTCTCAAGGATAACGTGAAGAGGGTCATGTTCTATTGCTAGAGTCTCAACAAACAAAAGCTTCATTGAAGACTTCATTTGGCGCATGCCCTTTTGGTTTTTGTGTTTTGCGATCAAACAAAATTTTATCTGGTTCGACTTGCCCTAATATTTGTGACATTGATGCCAGAAAACTATTTAGAGTTTGTAGTATTGCGCATTATTATAACTGTTGGGAGCATTCCGGTGTTCTTCATAGCCTGTGTAATGATGAATACTATGCAAATTTATGCTTGTTTTTAATATGGTCCAATTTGGGTCGTACTTTCATGTACGACTTTACTTCAGCTGTTCAGTCCCCCCTTCCTTCCAACTGAATATTAAATGATGTTGTGATAACTTATGAATCTAAGTGTTCTGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g098280.2.1SL2.50ch03:60629141..60635416981+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g098280.2SL2.50ch03:60629142..606357746,633+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g098280.2.1.1SL2.50ch03:60629142..60629253112+n/a
exonexon:Solyc03g098280.2.1.10SL2.50ch03:60632533..60632640108+n/a
exonexon:Solyc03g098280.2.1.11SL2.50ch03:60632776..6063284772+n/a
exonexon:Solyc03g098280.2.1.12SL2.50ch03:60633095..60633217123+n/a
exonexon:Solyc03g098280.2.1.13SL2.50ch03:60633293..60633458166+n/a
exonexon:Solyc03g098280.2.1.14SL2.50ch03:60633539..60633798260+2
exonexon:Solyc03g098280.2.1.15SL2.50ch03:60633876..60634018143+n/a
exonexon:Solyc03g098280.2.1.16SL2.50ch03:60634173..6063423563+1
exonexon:Solyc03g098280.2.1.17SL2.50ch03:60634313..6063437664+1
exonexon:Solyc03g098280.2.1.18SL2.50ch03:60634492..60634627136+n/a
exonexon:Solyc03g098280.2.1.19SL2.50ch03:60634706..6063477974+2
exonexon:Solyc03g098280.2.1.2SL2.50ch03:60629770..60630080311+2
exonexon:Solyc03g098280.2.1.20SL2.50ch03:60634862..6063495695+n/a
exonexon:Solyc03g098280.2.1.21SL2.50ch03:60635045..6063507632+1
exonexon:Solyc03g098280.2.1.22SL2.50ch03:60635199..60635774576+2
exonexon:Solyc03g098280.2.1.3SL2.50ch03:60630207..60630415209+n/a
exonexon:Solyc03g098280.2.1.4SL2.50ch03:60630501..60630650150+1
exonexon:Solyc03g098280.2.1.5SL2.50ch03:60630774..60630907134+1
exonexon:Solyc03g098280.2.1.6SL2.50ch03:60631032..60631141110+2
exonexon:Solyc03g098280.2.1.7SL2.50ch03:60631323..60631429107+n/a
exonexon:Solyc03g098280.2.1.8SL2.50ch03:60631597..60631735139+1
exonexon:Solyc03g098280.2.1.9SL2.50ch03:60631816..60631932117+n/a
intronintron:Solyc03g098280.2.1.1SL2.50ch03:60629254..60629769n/a+n/a
intronintron:Solyc03g098280.2.1.10SL2.50ch03:60632641..60632775n/a+n/a
intronintron:Solyc03g098280.2.1.11SL2.50ch03:60632848..60633094n/a+n/a
intronintron:Solyc03g098280.2.1.12SL2.50ch03:60633218..60633292n/a+n/a
intronintron:Solyc03g098280.2.1.13SL2.50ch03:60633459..60633538n/a+n/a
intronintron:Solyc03g098280.2.1.14SL2.50ch03:60633799..60633875n/a+n/a
intronintron:Solyc03g098280.2.1.15SL2.50ch03:60634019..60634172n/a+n/a
intronintron:Solyc03g098280.2.1.16SL2.50ch03:60634236..60634312n/a+n/a
intronintron:Solyc03g098280.2.1.17SL2.50ch03:60634377..60634491n/a+n/a
intronintron:Solyc03g098280.2.1.18SL2.50ch03:60634628..60634705n/a+n/a
intronintron:Solyc03g098280.2.1.19SL2.50ch03:60634780..60634861n/a+n/a
intronintron:Solyc03g098280.2.1.2SL2.50ch03:60630081..60630206n/a+n/a
intronintron:Solyc03g098280.2.1.20SL2.50ch03:60634957..60635044n/a+n/a
intronintron:Solyc03g098280.2.1.21SL2.50ch03:60635077..60635198n/a+n/a
intronintron:Solyc03g098280.2.1.3SL2.50ch03:60630416..60630500n/a+n/a
intronintron:Solyc03g098280.2.1.4SL2.50ch03:60630651..60630773n/a+n/a
intronintron:Solyc03g098280.2.1.5SL2.50ch03:60630908..60631031n/a+n/a
intronintron:Solyc03g098280.2.1.6SL2.50ch03:60631142..60631322n/a+n/a
intronintron:Solyc03g098280.2.1.7SL2.50ch03:60631430..60631596n/a+n/a
intronintron:Solyc03g098280.2.1.8SL2.50ch03:60631736..60631815n/a+n/a
intronintron:Solyc03g098280.2.1.9SL2.50ch03:60631933..60632532n/a+n/a
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http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17767959%2Fdetails feature 17767959
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