Solanum lycopersicum mRNA Solyc03g111730.2.1

mRNA details  
Name
Solyc03g111730.2.1
Type
mRNA
Length
1,441
Organism
Solanum lycopersicum
Description
Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain
Location(s)
SL2.50ch03:62379542..62381372
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006508
  • GO:0008234
Length
1831
Nb exon
4
Sifter term
GO:0004197
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g111730.2.1 Cathepsin B-like cysteine proteinase (AHRD V1 **-* CYSP_SCHMA); contains Interpro domain(s) IPR013128 Peptidase C1A, papain

TATAGAAGACCCATTGCTTCATAACATCATAATTTTATTTCAATATTTTCACCACTTCTTTTATTATTGTTGAGTGTTATTTCTTCCATAAGCAATCAATCACTTTGTTTCATTTATCTATAAAAGGCCCTCTTCATAGTCATCTAAAATAATCACATCTTGAGTCTCTTATCTTTCAAAATGAAGAAGTTGTTTCTAGTTCTTTTCACCTTAGCTTTGGTACTTAGGCTCGGGGAGAGTTTCGATTTCCACGAGAAAGAATTAGAGACTGAGGAAAAATTCTGGGAGTTGTATGAGAGATGGAGAAGCCATCACACCGTATCGAGGAGCCTTGACGAGAAACACAAGAGGTTTAATGTGTTTAAGGCTAATGTTCATTATGTTCACAACTTCAACAAGAAGGATAAGCCTTATAAGTTGAAACTGAATAAGTTTGCAGACATGACTAACCATGAATTCAGACAGCATTATGCTGGTTCTAAGATTAAGCATCATCGTACTTTGCTTGGAGCTTCACGAGCAAATGGAACTTTCATGTACGCCAACGAGGATAATGTCCCTCCTTCTATTGACTGGAGGAAGAAAGGTGCTGTCACTCCTGTCAAAGATCAAGGCCAGTGTGGAAGTTGCTGGGCATTTTCAACTGTGGTTGCGGTAGAGGGGATAAACCAAATCAAAACAAAGAAATTAGTATCTTTGTCGGAGCAAGAACTTGTTGACTGTGACACTACAGAAAACCAAGGATGCAATGGAGGATTGATGGACCCGGCATTTGACTTCATCAAGAAGAGGGGCGGCATCACAACAGAGGAGAGGTATCCTTATAAGGCTGAAGATGACAAGTGTGACATTCAAAAGAGGAATACTCCGGTGGTTTCAATTGACGGACACGAGGATGTTCCTCCTAATGATGAGGATGCACTGCTTAAAGCAGTAGCCAACCAGCCTATTTCTGTAGCTATAGACGCTTCAGGTTCTCAGTTCCAGTTCTACTCTGAGGGCGTATTCACCGGAGAATGTGGTACTGAGTTGGACCATGGTGTGGCTATTGTGGGGTATGGCACAACCGTCGATGGAACCAAATACTGGATTGTGAAGAACTCATGGGGAGCTGAATGGGGAGAAAAAGGATACATTAGAATGCAGCGCAAGGTTGACGCTGAAGAGGGGTTGTGTGGTATAGCAATGCAACCCTCCTACCCCATCAAGACTTCAAGCAACCCTACAGGGTCTCCTGCAGCCACACCTAAGGATGAACTCTAAGTTAAATGCACACAGCCTCATCTGTGCTTATTTTAGTCTTTACAAAAGTATTAGGCATCTACTAGGAAAGATGTCAATTTACATAAGATACACTTAACTTCATGTTGTCAATTTGTAGACTGCATTTTGGAATTTGATTTGATTAAGTTCATCTACTAAATCATTGGTATTACTATGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g111730.2.1SL2.50ch03:62379719..62381192361-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g111730.2SL2.50ch03:62379542..623813721,831-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g111730.2.1.1SL2.50ch03:62380751..62381372622-2
exonexon:Solyc03g111730.2.1.2SL2.50ch03:62380287..62380522236-n/a
exonexon:Solyc03g111730.2.1.3SL2.50ch03:62380063..62380203141-n/a
exonexon:Solyc03g111730.2.1.4SL2.50ch03:62379542..62379983442-n/a
intronintron:Solyc03g111730.2.1.2SL2.50ch03:62380523..62380750n/a-n/a
intronintron:Solyc03g111730.2.1.3SL2.50ch03:62380204..62380286n/a-n/a
intronintron:Solyc03g111730.2.1.4SL2.50ch03:62379984..62380062n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17769576%2Fdetails feature 17769576
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