Solanum lycopersicum mRNA Solyc03g112350.2.1

mRNA details  
Name
Solyc03g112350.2.1
Type
mRNA
Length
2,276
Organism
Solanum lycopersicum
Description
ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch03:62774447..62783199
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
Length
8753
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g112350.2.1 ATP dependent RNA helicase (AHRD V1 ***- B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGAGCTACCCTAATTACGACTCCAGATACGGTGATTCAGGCTCCTATCGACAGCGACGAAGTGACCTAATGGGTCCGCAGCCTTCTATGTATCCACGGCCTATGCCCGGTGGAGGTGCCGCTAGCTATGGCCGTGGTGGGCCGCTTCCTTATGGAGGTCCTCAGGCAGGGGGTCCACCGCCTATGGATGGTGGTTCTAGAGGGGGTATGGGTGGATCTGGACGCGTTGGTGGTGGGTATCAACCTTTTGAAGGTGGGTTTGCAAGAGGGTCGGATATGGGCAGGTTTGGAGGTGGAGGAGTTGACAGAGTCGCTAATGGTGGTATGGGGGAACGGCCTGGGAGATTTGGTGCTGGGGCAAGCTACAGTGGAGGTAGGAGTGGTGGTGGTGGTGGGAGAGGAGGTAGGGGTTTTGATGGAGGCTACAGTGGCGGACGAGGAGGTGGAAGGTTTAGTTCAGATGGAGGACGTGGTAGTAGTGGCGGGAGAGGAGGTAGGCATGGGAGATCGCGAGATGATCTTGACAACCTTACTCTTCCAAAGCAAGACTTTGGAAATTTGGTACCTTTTGAGAAGAATTTTTATGTTGAAAATCATGCTGTGAGGGCAATGACGGATCAGGAGGTTGCTCATTATCGTGCACGGCGTGACATTACCATTGAAGGACAGGATGTCCCTAGGCCAATTCAGATGTTCCATGAGGCGAACTTTCCTGATTATTGCCTCGAGGTTATTTCAAGACTAGGATTTGTTGAGCCAACACCTATCCAATCACAAGGATGGCCAATGGCTCTAAAGGGCAGAGACTTAATTGGAATTGCTGAAACCGGTTCTGGAAAGACTTTGGCATATTTATTGCCTGCTTTGGTCCATGTCAGCGCACAGCCCCGGTTGGCACAAGGTGATGGTCCAATTGTGCTGGTATTAGCACCTACAAGAGAATTAGCTGTTCAGATTCAAGAAGAAGCTGTGAAATTTGGATCACGTGCCAACATAAGAAGCACTTGCATATATGGTGGTGCCCCAAAAGGACCTCAAATCCGTGACCTTAGAAGAGGAGTTGAAATTGTGATAGCAACCCCCGGTCGGTTAATAGATATGCTGGAAGCTCAACATACAAACCTGAAGCGGGTGACATATCTTGTATTGGACGAGGCTGATCGAATGCTGGATATGGGGTTTGAGCCTCAAATAAGGAAACTAATTTCCCAGATTAGACCAGATAGACAAACCTTGTATTGGAGTGCCACTTGGCCCAGGGAGGTTGAAGCGCTGGCTAGGCAGTTTCTACGTAATCCCTATAAGGTCATCATTGGGTCTCCAGAATTGAAAGCAAATCAATCTATAAGGCAAGTCATTGAAGTTGTCACAGATTTAGAGAAATATAGCAGGTTGATTGGGCTTTTGAAAGAAGTGATGGATGGAAGCCGAATTCTAATATTTGTGGAAACAAAAAAAGGATGTGATCAAGTCACCAGACAATTGAGAATGGATGGATGGCCAGCTTTATCTATCCATGGTGATAAAAGCCAGGATGAGAGGGATTGGGTCCTGGCTGATTTCAAAAGTGGAAGAAGTCCCATAATGATTGCCACTGATGTTGCTGCACGTGGTCTTGATGTTAAGGACATAAAGTGTGTTATCAACTATGATTTCCCTTCAAGTCTCGAGGATTATATTCATAGGATTGGCAGAACTGGACGTGCTGGCGCAACAGGGACTGCTTTTACATTTTTCACTCACGCAAATGCCAAGTTTACGAGAGAGCTTATCAAGATCCTGCAGCAGGCAGGACAAATTGTTCCCCCTCAACTTTCTGCATTAGCTAGGTCTAGTGGTCCTAGCACTGGAGGAAGCAATTTCAGGTCTAGAGGACGAGGTGGCTTTGGGAACCGGGGGGGACAGAGATCTGGGTCTAATGTAATTCCTATTGGCGGTTCAAGAAGGCCTTGGTAGTTACCGAGTCTAGTATAGGAAATGTATACTAGACATAATTTTGGGATTCTCTATGCTTTTTTGCAGCATATAGATTTTAGTTAAAACTCATCTCTTTCCTTTCTAGTCTTGGTGGAGTTGGTTCATTACATGGCCAGTTCTTAGGAATTTGGATATGCAGATGCAGATAACATAGTTTGTGCAGGAATAGAATATTATACTGTCTGGTGCTATATTTTACCCTTCTGAATTTAAATTCATTCTGTTGTTTTGAGTAACTTTTACATTGAGCATCAGTATGGTGATGCATTCGACTGTAGTAAGTAGAAACCTATTAACTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g112350.2.1SL2.50ch03:62774446..62782879652+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g112350.2SL2.50ch03:62774447..627831998,753+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g112350.2.1.1SL2.50ch03:62774447..6277450862+n/a
exonexon:Solyc03g112350.2.1.10SL2.50ch03:62782776..62783199424+2
exonexon:Solyc03g112350.2.1.2SL2.50ch03:62774635..62775287653+1
exonexon:Solyc03g112350.2.1.3SL2.50ch03:62775368..62775547180+2
exonexon:Solyc03g112350.2.1.4SL2.50ch03:62775640..62775801162+2
exonexon:Solyc03g112350.2.1.5SL2.50ch03:62775886..62776040155+2
exonexon:Solyc03g112350.2.1.6SL2.50ch03:62777135..6277722793+n/a
exonexon:Solyc03g112350.2.1.7SL2.50ch03:62780228..6278031386+n/a
exonexon:Solyc03g112350.2.1.8SL2.50ch03:62780394..62780620227+1
exonexon:Solyc03g112350.2.1.9SL2.50ch03:62782429..62782662234+2
intronintron:Solyc03g112350.2.1.1SL2.50ch03:62774509..62774634n/a+n/a
intronintron:Solyc03g112350.2.1.2SL2.50ch03:62775288..62775367n/a+n/a
intronintron:Solyc03g112350.2.1.3SL2.50ch03:62775548..62775639n/a+n/a
intronintron:Solyc03g112350.2.1.4SL2.50ch03:62775802..62775885n/a+n/a
intronintron:Solyc03g112350.2.1.5SL2.50ch03:62776041..62777134n/a+n/a
intronintron:Solyc03g112350.2.1.6SL2.50ch03:62777228..62780227n/a+n/a
intronintron:Solyc03g112350.2.1.7SL2.50ch03:62780314..62780393n/a+n/a
intronintron:Solyc03g112350.2.1.8SL2.50ch03:62780621..62782428n/a+n/a
intronintron:Solyc03g112350.2.1.9SL2.50ch03:62782663..62782775n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17770079%2Fdetails feature 17770079
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