Solanum lycopersicum mRNA Solyc03g114830.2.1
 mRNA details
|
| Name | Type |
Length
1,193
|
Organism |
|
Description
MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
|
|
Location(s)
SL2.50ch03:64698963..64705289
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- Length
- 6327
- Sifter term
- GO:0005515
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g114830.2.1 MADS box transcription factor (AHRD V1 ***- Q9SBQ1_PETHY); contains Interpro domain(s) IPR002487 Transcription factor, K-box
TGACAACACTTTTGACGAAACCACTCTGGTATTTATTGAAACCTCTTTCTCCTACCTGGGGAGATCCTTCCACTTCCCAATAACGATACAGTTTTTTAATTTATCATTTGCCAAAAACAAAGAATTACTAAACATAAATATCCATTTCCATTGCACAATATACATATATATACACACAAAGAAGAAAGAAGAAAGAAAGAAATTAATATGGGTAGAGGAAGAGTACAATTGAAGAGAATTGAGAACAAAATTAATCGTCAAGTTACTTTTTCAAAGAGGCGATCTGGTTTGCTTAAAAAAGCTCATGAGATCTCTGTGCTTTGCGATGCTGAAGTTGGACTCATTGTTTTCTCAACTAAAGGAAAACTCTTTGAGTATTCTACTGACTCTTGCATGGAAAGGATTCTTGAAAGGTATGAAAGGTACTCATATGCTGAAAGGCAGCTTAATGCTACTGATATTATAACCCCGGGTAGCTGGACTTTGGAACATGCTAAGCTTAAGGCCAGACTTGAGGTTTTGCAAAGAAACCAAAAGCATTATGCAGGAGAAGAGTTGGACACATTGAGTATGAAAGAGCTTCAGAATCTGGAACACCAGCTCGATTCTGCTCTTAAGCACATTCGCTCTAGAAAGAACCAATTGATGCATGAATCCATTTCTGAGCTTCAAAAGAAGGACAAGGCATTGCAAGAACAAAACAACAATCTTTCAAAGCAGGTTAAGGAAAGGGAGAAAGAGATGGCCCAACAGACTCCGTGGGAGCAACAGAGTCATGATCATCTCAATTCATCTTCGTTTGTTTTGCCACACCCCTTTAACAATCTTCACATAGGGGAAGCATACCCAAATGCAGGAGACAATGGAGAAGTAGAAGGATCATCGCGGCAACAACAACAAAACAGTGCTTCTGTGATGCCTCCATGGATGCTTCGCCATCTCAACGGTTAAATTAAAACTTAATGAAGTATAAAGCAAGCGGACAATATTATGTTATCTATTAATCACTAATAGTATATGCACATATATTATATATATGTATGTTACATATTAGACAAACACAACTTTCATATCTACTTAATTGTGTATGGTGTATATATGGCTGTTGTGTAACAATATGCACAATATATTGTAGTAGTACCATATATCATCCTCTCTTTGGATGTTTTGTCTTAAAACATTTTACCACTAGC
TGACAACACTTTTGACGAAACCACTCTGGTATTTATTGAAACCTCTTTCTCCTACCTGGGGAGATCCTTCCACTTCCCAATAACGATACAGTTTTTTAATTTATCATTTGCCAAAAACAAAGAATTACTAAACATAAATATCCATTTCCATTGCACAATATACATATATATACACACAAAGAAGAAAGAAGAAAGAAAGAAATTAATATGGGTAGAGGAAGAGTACAATTGAAGAGAATTGAGAACAAAATTAATCGTCAAGTTACTTTTTCAAAGAGGCGATCTGGTTTGCTTAAAAAAGCTCATGAGATCTCTGTGCTTTGCGATGCTGAAGTTGGACTCATTGTTTTCTCAACTAAAGGAAAACTCTTTGAGTATTCTACTGACTCTTGCATGGAAAGGATTCTTGAAAGGTATGAAAGGTACTCATATGCTGAAAGGCAGCTTAATGCTACTGATATTATAACCCCGGGTAGCTGGACTTTGGAACATGCTAAGCTTAAGGCCAGACTTGAGGTTTTGCAAAGAAACCAAAAGCATTATGCAGGAGAAGAGTTGGACACATTGAGTATGAAAGAGCTTCAGAATCTGGAACACCAGCTCGATTCTGCTCTTAAGCACATTCGCTCTAGAAAGAACCAATTGATGCATGAATCCATTTCTGAGCTTCAAAAGAAGGACAAGGCATTGCAAGAACAAAACAACAATCTTTCAAAGCAGGTTAAGGAAAGGGAGAAAGAGATGGCCCAACAGACTCCGTGGGAGCAACAGAGTCATGATCATCTCAATTCATCTTCGTTTGTTTTGCCACACCCCTTTAACAATCTTCACATAGGGGAAGCATACCCAAATGCAGGAGACAATGGAGAAGTAGAAGGATCATCGCGGCAACAACAACAAAACAGTGCTTCTGTGATGCCTCCATGGATGCTTCGCCATCTCAACGGTTAAATTAAAACTTAATGAAGTATAAAGCAAGCGGACAATATTATGTTATCTATTAATCACTAATAGTATATGCACATATATTATATATATGTATGTTACATATTAGACAAACACAACTTTCATATCTACTTAATTGTGTATGGTGTATATATGGCTGTTGTGTAACAATATGCACAATATATTGTAGTAGTACCATATATCATCCTCTCTTTGGATGTTTTGTCTTAAAACATTTTACCACTAGC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g114830.2.1 | SL2.50ch03:64699204..64705082 | 248 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g114830.2 | SL2.50ch03:64698963..64705289 | 6,327 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g114830.2.1.1 | SL2.50ch03:64704898..64705289 | 392 | - | 1 |
| exon | exon:Solyc03g114830.2.1.2 | SL2.50ch03:64700373..64700451 | 79 | - | n/a |
| exon | exon:Solyc03g114830.2.1.3 | SL2.50ch03:64700206..64700270 | 65 | - | 1 |
| exon | exon:Solyc03g114830.2.1.4 | SL2.50ch03:64700027..64700126 | 100 | - | n/a |
| exon | exon:Solyc03g114830.2.1.5 | SL2.50ch03:64699889..64699930 | 42 | - | n/a |
| exon | exon:Solyc03g114830.2.1.6 | SL2.50ch03:64699645..64699686 | 42 | - | n/a |
| exon | exon:Solyc03g114830.2.1.7 | SL2.50ch03:64699435..64699550 | 116 | - | 1 |
| exon | exon:Solyc03g114830.2.1.8 | SL2.50ch03:64698963..64699319 | 357 | - | n/a |
| intron | intron:Solyc03g114830.2.1.2 | SL2.50ch03:64700452..64704897 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.3 | SL2.50ch03:64700271..64700372 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.4 | SL2.50ch03:64700127..64700205 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.5 | SL2.50ch03:64699931..64700026 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.6 | SL2.50ch03:64699687..64699888 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.7 | SL2.50ch03:64699551..64699644 | n/a | - | n/a |
| intron | intron:Solyc03g114830.2.1.8 | SL2.50ch03:64699320..64699434 | n/a | - | n/a |
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