Solanum lycopersicum mRNA Solyc03g114840.2.1

mRNA details  
Name
Solyc03g114840.2.1
Type
mRNA
Length
1,235
Organism
Solanum lycopersicum
Description
MADS box transcription factor 11 (AHRD V1 **** D9IFM5_ONCHC); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch03:64714623..64720929
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
6307
Nb exon
8
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g114840.2.1 MADS box transcription factor 11 (AHRD V1 **** D9IFM5_ONCHC); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box

GGGGGTGTAAATGGAAAGGTACCAAAGATAGAGAAAGTCCCAGGGTTTCCATATTTCCAACTCTCTCTTTCTTTCATTTATTTTAATTTGTACCTTTTGTTATCCAAAAGTAGTTGAGCTTGTAACCAATAATCCCCCCTTCTTTTCTTATTTTTTTTAAAATCTCTGAAAAAATTGAAGATTGATTTCTCAATGGGAAGAGGAAGAGTTGAGCTTAAGAGAATAGAAAATAAAATAAATAGGCAAGTCACTTTTGCTAAGAGAAGAAATGGACTTCTTAAAAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAAGTTGCCCTTATAATCTTCTCTAATAGGGGTAAACTCTATGAATTTTGCAGCACTTCAAGCATGGTGAAAACAATTGAAAAGTACCAACGTTGCAGCTATGCTACTTTGGAAGCCAACCAATCAGTTACTGATACTCAGAATAACTACCACGAATATCTGAGGCTAAAAGCTAGAGTTGAGCTCCTCCAACGATCTCAGAGAAACTTTCTTGGTGAAGATTTGGGCACGTTAAGCTCGAAGGACCTTGAGCAGCTTGAGAATCAATTAGAGTCTTCCTTAAAGCAAATCAGGTCAAGGAAGACACAATTCATGCTGGATCAGCTTGCAGATCTTCAACAAAAGGAGCAAATGCTTGCAGAATCTAATAGATTACTCCGTAGAAAGTTAGAAGAAAGTGTAGCTGGATTTCCACTTCGATTGTGTTGGGAAGATGGAGGTGATCATCAACTTATGCATCAACAAAATCGTCTCCCTAACACAGAGGGTTTCTTTCAGCCTCTTGGATTGCATTCTTCTTCTCCACATTTTGGGTACAATCCTGTTAATACAGATGAGGTGAATGCAGCGGCAACTGCACACAATATGAATGGATTTATTCATGGATGGATGCTTTAATCTGATAATTCGAACAAGCTAATCCATGTTTGGTTAAACAGTTATACAGTAATAATGTATTGCATGTATTATCATCCTTTTTTGTTTTGTTGCAAATTTTATTTCGAAACTCTCTTCAGGAATTATGGCGGCGATCGATTAATCGAGGACAGTAAATGTAATGTATGCATAAGTTGCTACTTTAACATTTGAAACCTCCTGACCATGCATTTCTGATTGTATCACAATGTGTAATTAAATGGAATTGTTGTATTTTTTGTATCATTGAATCATATGCTTATCTTGTACTATATATTAATGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g114840.2.1SL2.50ch03:64714924..64720737247-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g114840.2SL2.50ch03:64714623..647209296,307-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g114840.2.1.1SL2.50ch03:64720553..64720929377-1
exonexon:Solyc03g114840.2.1.2SL2.50ch03:64718807..6471888579-n/a
exonexon:Solyc03g114840.2.1.3SL2.50ch03:64717337..6471739862-1
exonexon:Solyc03g114840.2.1.4SL2.50ch03:64717069..64717168100-n/a
exonexon:Solyc03g114840.2.1.5SL2.50ch03:64716141..6471618242-n/a
exonexon:Solyc03g114840.2.1.6SL2.50ch03:64715998..6471603942-n/a
exonexon:Solyc03g114840.2.1.7SL2.50ch03:64715717..64715862146-1
exonexon:Solyc03g114840.2.1.8SL2.50ch03:64714623..64715009387-n/a
intronintron:Solyc03g114840.2.1.2SL2.50ch03:64718886..64720552n/a-n/a
intronintron:Solyc03g114840.2.1.3SL2.50ch03:64717399..64718806n/a-n/a
intronintron:Solyc03g114840.2.1.4SL2.50ch03:64717169..64717336n/a-n/a
intronintron:Solyc03g114840.2.1.5SL2.50ch03:64716183..64717068n/a-n/a
intronintron:Solyc03g114840.2.1.6SL2.50ch03:64716040..64716140n/a-n/a
intronintron:Solyc03g114840.2.1.7SL2.50ch03:64715863..64715997n/a-n/a
intronintron:Solyc03g114840.2.1.8SL2.50ch03:64715010..64715716n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17773033%2Fdetails feature 17773033
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)