Solanum lycopersicum mRNA Solyc03g115230.2.1

mRNA details  
Name
Solyc03g115230.2.1
Type
mRNA
Length
3,194
Organism
Solanum lycopersicum
Description
ClpB chaperone (AHRD V1 ***- D6QXI5_TRYCR); contains Interpro domain(s) IPR013093 ATPase associated with various cellular activities, AAA-2
Location(s)
SL2.50ch03:65011966..65016121
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0019538
  • GO:0005524
  • GO:0017111
Length
4156
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g115230.2.1 ClpB chaperone (AHRD V1 ***- D6QXI5_TRYCR); contains Interpro domain(s) IPR013093 ATPase associated with various cellular activities, AAA-2

CAACCGAAAAAAACTACAGAAGAAGAAACACTCGAAACTCGAAATCACGCATTTGATTCTATCCCAAGAACAAATCAAAAGGAATTCTCTTGTTATCTGTTAAAAGTTTATTGAAAGACAGTAATTCATCATGAATCCTGAAAAATTTACTCACAAGACAAATGAGGCTATTGCTGAGGCACATGAACTGGCTGTATCAGCAGGGCATGCTCAGTTGACACCTCTGCATATGGCTTTGGCTTTATTATCTGATCACAGTGGTATATTCTGGCAAGCAATTGTCAATGCTGCTGGTAGTGAAGAGACTGCCAATGGTGTTGAAAGAGTGTTCAATCAAGCTAAGAAGAAAATTCCTTCTCAGTCACCAGCACCTGATCAAGTTCCAGCAAGTACTTCGCTTATTAAGGTGCTACGACGAGCACAGTCGTTGCAGAAGTCTCGTGGTGACAGCCATTTGGCGGTTGATCTGTTGATTTTAGGCCTTCTGGAAGATTCCCAAATTGCAGATCTTTTGAAAGATTCTGGTCTTAGTGCAGCAAGAGTGAAATCAGAAGTTGAGAAACTTAGAGGAAAAGATGGAAAGAAAGTGGAAAGTGCTACAGGGGATACTACATTTCAAGCACTTAAGACCTATGGTCGTGATCTTGTGGAACAGGCAGGAAAACTTGATCCTGTGATTGGTAGGGATGAAGAAATTCGAAGAGTAATTCGGATTCTTTCGAGGAGGACAAAGAACAATCCGGTGCTTATTGGTGAGCCTGGTGTTGGTAAAACAGCTGTAGTTGAAGGGCTAGCACAAAGGATAGTTCGAGGGGATGTTCCAAGCAATTTGGCTGATGTTAGGCTTATAGCATTGGATATGGGAGCACTCATTGCTGGAGCAAAGTACAGAGGTGAATTTGAAGAGAGATTGAAGGCTGTTCTGAAGGAAGTGGAAGATGCAGAAGGGAAAGTAATTCTCTTCATTGATGAGATCCACTTGGTTTTAGGTGCTGGTAGGACTGAAGGATCAATGGATGCTGCCAATTTGTTCAAACCGATGCTTGCTCGGGGCCAATTAAGGTGCATTGGTGCAACAACCCTGGAAGAGTACAGGAAGTATGTGGAGAAAGATGCTGCATTCGAAAGGCGTTTCCAGCAGGTATATGTCGCTGAGCCTAGCGTTCCCGACACTATAAGTATCCTTCGAGGGTTGAAGGAGAAGTATGAAGGCCATCATGGTGTCAAGATTCAGGATAGGGCTCTCGTTATTGCAGCCCAGCTTTCAGCTCGATACATTACAGGTCGACATTTGCCTGATAAGGCTATTGACTTAGTTGATGAGGCTTGTGCAAATGTGAGGGTGCAACTTGATAGCCAGCCAGAAGAAATTGATAATCTTGAAAGGAAGAGGATTCAGCTAGAAGTTGAACATCATGCTCTTGAAAAGGAAAAAGACAAGGCTAGCAAGGCTCGACTTGTTGAAGTGAGGAAAGAGCTCGATGACTTGAGGGACAAACTCCAACCTTTGATGATGAGGTATAAGAAAGAGAAGGAACGGGTTGATGAGCTTCGAAGGCTTAAGCAAAAGCGCGATGAACTTACATATGCTTTACAAGAAGCTGAAAGGAGATATGATCTTGCTAGAGCAGCAGATCTTAGATACGGTGCCATCCAAGAAGTAGAATCTGCAATAGCAAATCTTGAGAGTAGCACAGATGAGAGTACAATGTTGACAGAGACTGTCGGACCCGATCAGATTGCGGAAGTAGTTAGTCGCTGGACTGGAATTCCTGTCTCTAGGCTTGGCCAGAATGAGAAGGAGAAATTGATTGGTCTTGCTGATAGATTGCACCTAAGAGTTGTCGGGCAAGATCAAGCTGTTAAAGCTGTTGCTGAGGCTGTGTTGAGGTCTAGAGCTGGATTAGGAAGGCCACAGCAACCAACTGGTTCATTCCTTTTCTTGGGGCCAACTGGTGTTGGAAAGACTGAACTTGCTAAAGCTCTTGCTGAGCAGCTATTTGATGATGACAAATTGATGGTCAGAATTGACATGTCCGAATACATGGAACAACATTCTGTTGCCCGGTTGATTGGTGCTCCACCAGGTTATGTTGGACATGAGGAAGGAGGGCAACTTACGGAAGCTGTAAGGAGGCGCCCTTACAGTGTTGTGCTATTTGACGAAGTGGAAAAAGCTCACCCTGCAGTGTTTAATGCCTTGCTTCAAGTGTTGGATGATGGAAGATTAACTGATGGTCAAGGTCGTACTGTTGATTTCACCAACACTGTGATCATTATGACCTCAAATTTGGGAGCAGAGTATCTCTTGTCAGGATTAAGTGGCAAGTGTACCATGGAGAAGGCCCGTGAAATGGTCATGCAGGAGGTGAGGAAGCAATTTAAGCCCGAGTTACTCAACAGGCTCGATGAGATTGTGGTGTTCGATCCTTTATCACACGAGCAGTTGAGGCAAGTCTGCCGTCACCAACTGAAAGATGTGGCAAGCCGTTTAGCTGAGAGGGGTATTGCTTTGGGTGTTACAGAGGCCGCCTTAGATGTCATACTTGCTCAGAGTTATGATCCGGTGTATGGTGCAAGGCCTATTAGGAGGTGGTTGGAGAAGAAAGTTGTAACGGAGTTATCAAAGATGCTTGTGAAGGAGGAGATTGATGAGAATTCGACCGTGTACATAGATGCTGGACGTGGCGGAAAAGATCTAACATATAGGGTGGAGAATAATGGAGGGCTTGTGAATGCTGCTACTGGTCAAAAATCTGATGTACTGATTCAGCTACCTAATGGGCCAAGGAATGATGCTGCTCAAGCAGTGAAGAAAATGAGGATTGAAGAAATAGATGACGAAGATGATGAAATGGCAGATTAAAGAGAGGTTGAAAATAACACCATGAAAGTTGAAGATATATGAATTATTACTTTTTGTTTAAAATACCCTGTATAGGGTTAGTCCAATTTTACATCATTAAGAAGTGAACGTTCACAAGTTCTCTGTTGATTTTGTTGTGTTGTTTCTTTATGCAGCTTGAAAATGTCTAAATAGTAAATTGTATTTCTCTGATTTTCTGAAAAATAATCTTTTCTCCATCTTTGTGTTCTGATTTTCTTCAAATTTGAGCGGAAAAAGTTCAAAATCAACTCAATATTGTAACAATGATTAACAATTTGTGTGAATTGACCGATTCTAGTTGTGTTGT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g115230.2.1SL2.50ch03:65012293..65015488912-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g115230.2SL2.50ch03:65011966..650161214,156-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g115230.2.1.1SL2.50ch03:65016016..65016121106-n/a
exonexon:Solyc03g115230.2.1.2SL2.50ch03:65014336..650155121,177-2
exonexon:Solyc03g115230.2.1.3SL2.50ch03:65014063..65014244182-n/a
exonexon:Solyc03g115230.2.1.4SL2.50ch03:65013352..65013974623-1
exonexon:Solyc03g115230.2.1.5SL2.50ch03:65012976..65013255280-n/a
exonexon:Solyc03g115230.2.1.6SL2.50ch03:65012688..65012885198-n/a
exonexon:Solyc03g115230.2.1.7SL2.50ch03:65011966..65012593628-n/a
intronintron:Solyc03g115230.2.1.2SL2.50ch03:65015513..65016015n/a-n/a
intronintron:Solyc03g115230.2.1.3SL2.50ch03:65014245..65014335n/a-n/a
intronintron:Solyc03g115230.2.1.4SL2.50ch03:65013975..65014062n/a-n/a
intronintron:Solyc03g115230.2.1.5SL2.50ch03:65013256..65013351n/a-n/a
intronintron:Solyc03g115230.2.1.6SL2.50ch03:65012886..65012975n/a-n/a
intronintron:Solyc03g115230.2.1.7SL2.50ch03:65012594..65012687n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17773436%2Fdetails feature 17773436
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