Solanum lycopersicum mRNA Solyc03g115540.1.1

mRNA details  
Name
Solyc03g115540.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc03g115540.1.1
Length
1,320
  
Description
BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch03:65211969..65214204
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
2236
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g115540.1.1 BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGAGTCATTGTACGGTACCAACTTGGAATCCAAGTTATCAAAGACAAGAACATGTCGTAGAAGCCGAAGAAGCTAACAAATATCCTCACCTACATAACCAGCAGATTCAAATTAATCATCTTTTGCCCATGTCTAGTAAGTGTGAAGAAGTTGCAGAGCTGACATGGGAAAAAGGGCAGTTAGGAATGCATGGACTAGGGGGGATCCTTTCCATTTCACAAGCAAAACAGACACTGGGAAGAACCGGCGATACATTAGAGTCCATCGTGCATCAAGCCACATATCACGCGAAGAATCAGACTTCAATACATCAAAATTATGCCCAAAATGAAGATCAGGATCTGAAAACTGGGGTGCTGTATAGCGGAGGAAAATGGGGCGAGAGTTCACAACAAATGGCGCCTCCTCGAGCAACAGTGTTGGCAAAAAAGAGGATGAGACCATCAGAATCTGACCCTCAATATGGTGGAGCTGAAGATCATGAGTATGCAGAAGGTAGCGCGTGTGCAAGTGCCAGCGCTACCTTCTATAGGGAGAATGATACCACCATGGTTACATGGCCTTCCTTTGACGAGTCTTCGCGTAGCATCAAGTCTAAAACCGCTTGTGATGAGGATTCTGCTTGTCATGGTGGTGGCTCGGAAAACAAGGAGGAAGAACATGAAACAAAAAGGTCCAACTCATCAAGACGTAGCCGAGCAGCAGCTGTTCATAACCAGTCAGAGCGGAGACGTCGAGATAGAATTAACCAAAGGATGAAAGCTCTACAGAGATTGGTACCAAATGCAAGTAAGACAGATAAAGCATCAATGCTTGATGAAGTGATAGATTACTTAAAGCAGCTACAAGCACAAGTTCAATTGATGAGTAGTACTCCAAGAAACATGGCACCACAAATGATGATGCCTCTTGGAATGCATCAACATATTCAAATGTCGTTACTAGCAAGAATGGGCGTTGGCGTTGGTCTTGGCATGGGTATGGGAATGTTTGACATGACTGCTTTAGCTCGCGCTGCTGCTGCCTCTGCCACAACTCATCCAAATCAAATGACTACAGCTCCCATCAATATTCCATTCACCCCATCAGGAGCCTTCGCGCTGCCTGCAGCCCCGGCTAATTCTGTTAGCCCTGCCAGTGCCACCACTAGTACTACCACCAATTCCATTCCTTTTACGAACCCCTATAGTGCTTTTCTACCTCAATCGATGGACATGGAGTTCTTCAACAACATGGCAGCTTTGTATCGGCAGCAATTAGCTAATCAATCTACACAGATCACAGGCAGCAAGTTGAACCAGGAAAACCAGACAGAATAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g115540.1.1SL2.50ch03:65211968..65214204440+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g115540.1SL2.50ch03:65211969..652142042,236+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g115540.1.1.1SL2.50ch03:65211969..65212099131+n/a
exonexon:Solyc03g115540.1.1.2SL2.50ch03:65212314..65212824511+1
exonexon:Solyc03g115540.1.1.3SL2.50ch03:65212998..6521308487+n/a
exonexon:Solyc03g115540.1.1.4SL2.50ch03:65213292..6521335766+n/a
exonexon:Solyc03g115540.1.1.5SL2.50ch03:65213489..65213899411+n/a
exonexon:Solyc03g115540.1.1.6SL2.50ch03:65214091..65214204114+n/a
intronintron:Solyc03g115540.1.1.1SL2.50ch03:65212100..65212313n/a+n/a
intronintron:Solyc03g115540.1.1.2SL2.50ch03:65212825..65212997n/a+n/a
intronintron:Solyc03g115540.1.1.3SL2.50ch03:65213085..65213291n/a+n/a
intronintron:Solyc03g115540.1.1.4SL2.50ch03:65213358..65213488n/a+n/a
intronintron:Solyc03g115540.1.1.5SL2.50ch03:65213900..65214090n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17773775%2Fdetails feature 17773775
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