Solanum lycopersicum mRNA Solyc03g116340.2.1

mRNA details  
Name
Solyc03g116340.2.1
Type
mRNA
Length
1,357
Organism
Solanum lycopersicum
Description
Transcription factor (Fragment) (AHRD V1 *--* D6MK24_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch03:65821345..65824736
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3392
Nb exon
4
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g116340.2.1 Transcription factor (Fragment) (AHRD V1 *--* D6MK24_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

AAAATGGGGATCAAATGCTGTTATTTACTACCCAGTCTTCCGAAACAAAGAGTGTTTCTGCTTAGTTCGCTTGAATTTTACTTACCTCAATTTAGGAGTTCCGCTGTTTAATAGCATAGCATAGGAAATAGATGGTGAAGTAATGAGAAATCGGCTAAGTATACCGTGTTAATGCTGAAAATTTGTTACTTCAAATGAACTTAGCTTGATTGTTCATCATTTGACAAACTTTTGGACAATCCTTACTTGCACCTTTTTTTCCCTTGGACAGACAATAGTTTTTCTCATCAAAGGCTACACCGTGGACTCGAATAAGAGATGGATACAGAAAATCCTGCTCCAATAGTTGAAAAGGATACTACAGATGCGGAGACATCATTGGATAGCTCTCATCTCAGGAAGAAGATTCAGAAGAAAGTTCCAAAAAGAATTCACAAAGCTGAGAGAGAGAAAATGAAGAGAGAGCATTTAAATGAGCTTTTTCTTGGTTTGGCTGATGCTCTTGAACTATCTGAGCAGATGAATGGAAAAGCCTCTGTATTGAGTGAAGCTGCTCGATTTGTAAAGGACATGCTTTCTCAGATCAAGCATATGAGGACAGAAAATACGACTTTGCTGTCTGAATCTCAATATCTTAGCGTGGAGAAAAAGGAGCTTGAGGATGAAAATACAGTTCTGGAGGCTGAAATTAGCAAACTGCAGAATGAGGTCAAAGCAAGGGAAGCTGAGACTAGTCTTGACCTAAATCTAGCTCCTCCTGAAATTCATCACACAGAGTTTGCCTCACAAACTAACTATATGAGATTGCCTGCTTCGGAGCACGGATTTCAACAGTCACAGATGATGAACCCCGTGTACGTCTTTCCCTTGAGTTCTAATCCTCAGGCTTATCCAGCGCCTGATGCTGCAGATCCCATGGCTATGCCCTCATCTACTGTGAAGAAACCACAGCCTAGATACCCCACTCCAAATGATGTATGGCCATCCCAAATCCTTGAAAAGAGGCCTCAGTTATTGCGACAGGAGGTTCAAGATGGTGCGTAAGTATAGTAGTCTAGAAGAAACAAGACATTCGTTCATAGGGAATGGCATGTATAAGTACTAGTTAGGTAATGTAGATTTAGACGATAAACAGCAGCAGATTCAGCAATACTTTGGACTTGCAGCTCTCCATTGTATATAAACTTTTCGTTGTATTTTGATCAACAATAACCTAGTTTGTCTGTTTGAGTGTCGAGGTAGTACCAGTTGGGAGGTAACCATACCATAGCAGTGTTGGATACAAAAATATGTTGGTAAACAAAACCTGTAAGTAGGCGCCTGACATGACATCTATGGATTTTGATGTTGAACTCTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g116340.2.1SL2.50ch03:65821662..65824423242+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g116340.2SL2.50ch03:65821345..658247363,392+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g116340.2.1.1SL2.50ch03:65821345..65821730386+n/a
exonexon:Solyc03g116340.2.1.2SL2.50ch03:65823244..65823362119+n/a
exonexon:Solyc03g116340.2.1.3SL2.50ch03:65823490..65823617128+1
exonexon:Solyc03g116340.2.1.4SL2.50ch03:65824013..65824736724+2
intronintron:Solyc03g116340.2.1.1SL2.50ch03:65821731..65823243n/a+n/a
intronintron:Solyc03g116340.2.1.2SL2.50ch03:65823363..65823489n/a+n/a
intronintron:Solyc03g116340.2.1.3SL2.50ch03:65823618..65824012n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17774517%2Fdetails feature 17774517
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