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Solanum lycopersicum mRNA Solyc03g117440.2.1

mRNA details  
Name
Solyc03g117440.2.1
Type
mRNA
Length
1,992
Organism
Solanum lycopersicum
Description
ATP dependent RNA helicase (AHRD V1 **** B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Location(s)
SL2.50ch03:66608138..66611290
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008026
  • GO:0005524
  • GO:0008270
Length
3153
Nb exon
4
Sifter term
GO:0004004
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g117440.2.1 ATP dependent RNA helicase (AHRD V1 **** B3LNW9_YEAS1); contains Interpro domain(s) IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal

ATGGCAGACCCCGTAAATATGGAGATGGAGGATGAGGATAATTATGTTGAATATGTACCAGTTGCAAAGCGCCGAGCGATTGAGGCTCAAAAGATCCTTCAGAGGAAGGGAAACTCTTCTGTCTTGGAAGAGGAAGAGGAAAAATCGAAGCTTGTTGAGGCTAAGCCGAGTTTGCTTGTGATGGCCACCCAGCTGAAGAAAGAGCAACCTGAAATTAGTCCTACTGAACAAGTAGTCTTGCAAGAGAAGGAGATGATTGAGCATTTATCTGATCGGAAGACGCTAATGTCAGTTCGTGAATTAGCTAAAGGTATTACTTATACAGAGCCTTTGTTAACCGGTTGGAAGCCTCCATTAGCCATTAGACGGATGTCAAAGAAATCCTGTGATGCCATTCGGAAGCAGTGGCATATTATTGTGGATGGCGAAGATATTCCTCCACCAATAAAGACTTTCAAGGAAATGAGGTTCCCTGAACCCATGTTGAAGAAACTTAAAGCGAAGGGGATTATTCAGCCGACACCAATCCAAGTGCAGGGCCTTCCTGTTATTTTATCAGGTCGGGATATGATAGGTATAGCTTTTACAGGCTCTGGAAAAACATTGGTTTTTGTTTTGCCACTCATCATGGTGGCTTTGCAGGAAGAGATTATGATGCCTATTGCTCCTGGGGAAGGGCCACTCGGTTTGATTGTTTGTCCATCTAGAGAGCTTGCAAGACAGACGTATGAAGTTATAGAACAATTTTTAGAACCACTCAAGGAGTATGGTTACCCGGAATTGAGGCCTTTGCTATGTATTGGTGGAGTTGATATGAAGTCCCAAACTGATGTTGTCAAGAAGGGAGTGCACATTGTGGTTGCTACACCTGGAAGGCTCAAAGATATGTTAGCAAAGAAGAAAATGAACCTTGACAATTGCAGATACTTGACACTGGATGAAGCAGATAGATTGGTCGATCTCGGTTTTGAAGATGATATTAGGGAGGTGTTTGATCATTTCAAAGCTCAAAGACAAACTCTTCTATTTTCTGCTACAATGCCCACGAAGATCCAGAATTTTGCACGAAGTGCATTAGTTAAACCAATAACTGTGAATGTGGGGAGGGCTGGAGCAGCTAACCTTGATGTGATTCAGGAAGTCGAGTATGTAAAGCAGGAAGCCAAGATTGTTTATCTTCTCGAGTGCTTGCAAAAGACTCCACCACCGGTTCTGGTTTTCTGTGAGAATAAGGCTGATGTGGATGATATCCATGAATATCTTCTCTTGAAAGGAGTAGAAGCTGTGGCTATTCATGGAGGAAAGGATCAAGAGGATAGAGAGTATGCAATTGCGACATTCAAATCAGGCAAGAAAGATGTTCTAGTTGCCACTGATGTTGCCTCTAAGGGGTTGGATTTTCCTGAGATTCAGCATGTAATTAACTATGATATGCCTGCCGAAATTGAAAACTACGTGCATCGGATTGGACGAACAGGAAGATGTGGAAAAACAGGAATTGCCACAACCTTTATCAACAAGAATCAAAGCGAAACAACTCTCCTTGATCTGAAACACTTGTTACAAGAAGCAAAACAAAGGATCCCTCCTGTCCTTGCAGAGCTAAATGACCCTATGGACGACGTTGAGGCAATCACAAATGCAAGCGGAGTAAAGGGTTGTGCCTATTGTGGTGGGCTTGGTCATCGTATCCGTGACTGCCCCAAGCTAGAGCACCAAAAGAGCGTCCAGATAGCCAATTCGAGGAGAGACTACTTCGGTTCTGGAGGTTATCGTGGAGAAATTTAATTCCCTTGCCAAATATATCTTCCATCTCTTTGTAGCTTCTCAATGTACGATGTAATATTCATGGTTAATTTAAAATTTGCTTCTTGAACAGTCTTGGATGCTTTAACTTTTTGCTTCAGAACCAGATGTATCTTAACATTAGACAGATTGTGAACGTCTATTTTATGTGACCAGTATTTATGTTCAGAATAAAATAAAAACAGA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g117440.2.1SL2.50ch03:66608137..66610809596+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g117440.2SL2.50ch03:66608138..666112903,153+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g117440.2.1.1SL2.50ch03:66608138..6660815821+n/a
exonexon:Solyc03g117440.2.1.2SL2.50ch03:66608424..66609325902+n/a
exonexon:Solyc03g117440.2.1.3SL2.50ch03:66609945..666109941,050+1
exonexon:Solyc03g117440.2.1.4SL2.50ch03:66611272..6661129019+n/a
intronintron:Solyc03g117440.2.1.1SL2.50ch03:66608159..66608423n/a+n/a
intronintron:Solyc03g117440.2.1.2SL2.50ch03:66609326..66609944n/a+n/a
intronintron:Solyc03g117440.2.1.3SL2.50ch03:66610995..66611271n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17775769%2Fdetails feature 17775769
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