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Solanum lycopersicum mRNA Solyc03g119390.2.1

mRNA details  
Name
Solyc03g119390.2.1
Type
mRNA
Length
1,027
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch03:68014579..68016210
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
1632
Nb exon
6
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g119390.2.1 Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GTTATCACAAACTAAAAAAACAAACACAACATAAAAGGACCTGTTCCTTCCTACACACCCAAAAAAAAATGGCTGATCATCAATTCAACTCAGACATACAAAATTTTATCACAAATTCACCATTTTCTCTATTAAATTTCGATTCGAGTGTCGATTTAATGAACCAATTTCCAGATATGATGACCATTCCTTGTTCATCAGACATGTCAAGTTTCAATATACAGAGTTCAATGGAATTTTCGAATGATAATGTTTTCACTCAAGTAAATGATCAGTTTCCAGGAAGTTTACAAGAAATATTTCAAGGAAATATACAACAAGAAAGCAAAAATGAGGAAATTAATGATAGTAAAAAAAGAAAAATTAGTGATACTCCAGAAAGCAGTTCAGCTTCTGCTACGGGGAATAAAAGAAGAAATACTAAAGGAAGAGGAAATAGAGTGAAAGTTGATGAAAAGGAAGAAGAAAAACCAAGAGAAGTGGTTCATGTTAGAGCTAAAAGAGGCCAAGCAACTGATAGTCACAGCTTAGCAGAAAGGGTTAGAAGAGGAAAAATTAATGAAAGACTTAGATGCTTGCAAGATATTGTTCCAGGATGCTACAAGACAATGGGCATGGCAGGAATGTTGGATGAAATTATTAATTACGTGCAATCCTTGCAAAATCAAGTCGAGTTCCTCTCCATGAAACTTACCGCAGCAAGCTCATACTACGACTTCAACTCGGAATCCGACATTCTTGTGTCATTACAGAGAGCAAAGGCATATGAAGCACTAAAAATGCAGAAAATGATGAAGAAGGAAATTGAATGTGAAGTGATGTCTACAAATCAAGTTGGTCTTCATTTTGGAAGTTATCCAATGTTGCCATACAACACCTGAAGATTCTGCCCAATTAATTTTTTATTTTTATTTTCAATCAAACTTTTTTCCCACTTGGTGCTATACATTTGCAATATTTGTACACATTTGGAAAAAAGAAATTCAGATATTTTATATTAATATACTTGTATTAGGACTCACTCAGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g119390.2.1SL2.50ch03:68014646..68016064271+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g119390.2SL2.50ch03:68014579..680162101,632+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g119390.2.1.1SL2.50ch03:68014579..68014997419+n/a
exonexon:Solyc03g119390.2.1.2SL2.50ch03:68015142..68015261120+n/a
exonexon:Solyc03g119390.2.1.3SL2.50ch03:68015386..6801545166+n/a
exonexon:Solyc03g119390.2.1.4SL2.50ch03:68015540..6801560869+n/a
exonexon:Solyc03g119390.2.1.5SL2.50ch03:68015698..6801577578+n/a
exonexon:Solyc03g119390.2.1.6SL2.50ch03:68015936..68016210275+n/a
intronintron:Solyc03g119390.2.1.1SL2.50ch03:68014998..68015141n/a+n/a
intronintron:Solyc03g119390.2.1.2SL2.50ch03:68015262..68015385n/a+n/a
intronintron:Solyc03g119390.2.1.3SL2.50ch03:68015452..68015539n/a+n/a
intronintron:Solyc03g119390.2.1.4SL2.50ch03:68015609..68015697n/a+n/a
intronintron:Solyc03g119390.2.1.5SL2.50ch03:68015776..68015935n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17778420%2Fdetails feature 17778420
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