Solanum lycopersicum mRNA Solyc03g119640.2.1

mRNA details  
Name
Solyc03g119640.2.1
Type
mRNA
Length
2,299
Organism
Solanum lycopersicum
Description
Aluminum-activated malate transporter-like (AHRD V1 *--- Q5Z6M4_ORYSJ); contains Interpro domain(s) IPR006214 Uncharacterised protein family UPF0005
Location(s)
SL2.50ch03:68196449..68200622
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
4174
Nb exon
6
Sifter term
GO:0005253
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g119640.2.1 Aluminum-activated malate transporter-like (AHRD V1 *--- Q5Z6M4_ORYSJ); contains Interpro domain(s) IPR006214 Uncharacterised protein family UPF0005

TATGAGTACAACAGTCAACATAAACAATTCTTTTATTTTTTCACGTTCATCACTGTCACAGTATCCCTTTCTCTCCGGGAACTCTTCGTCAGTTTTTTCGACTTTCCCCATATTATCGGAATGGTGAGAAAATTGAATTCCTTCAGGAAGAGTTTTGAAGACAAACGATTAAGAGAACGTCTTCTTTCTTTATGCAACGGCGTCGAGTACACTGAGTTACCTGGTTTCCGGCATAGTCTTGATCACCAAGACCAAGAAACTTCTGGATGTTGTTCTTCTTTCCGGGAGAGGTTTTCTGAGCTATGGAAGGATTGGAAAAGAGTTTCTGTAAAGGCGATGGAGATGGGTCGAACCGACCCGAGAAAGATCATCTTCTCCGCCAAGATGGGTTTGGCATTGATTCTTATATCTTTGTTAATCTTTTTTAAGGAACCCGCGGTTAAAGAGCTTGGTAAATACTCTGTATGGGCTATTCTTACTGTCGTCGTCGTTTTTGAGTTCAGTATTGGAGCCACTCTAAGCAAAGGGTTTAATCGTGGGCTTGGGACATTATCAGCTGGAGGACTAGCTCTTGCAATGGCTGAATTGTCTCAATTGGCTGGAGAATGGGAAGAAGTTGTTATAGTAATTGGTATATTTATAACAGGTTTTTTAATTACATATGCAAAACAGTACCCAGCAATGAAGCCTTATGAATATGGTTTCCGGGTTTTCTTGATAACGTATTGTTTCATCATGGTATCTGGCTATCACACAAGAGAATTTATTGAAACAGCTGTTAGTCGGTTTTTGCTCATTGCACTTGGTGCTAGTATTTCTTTAGCTGTGAACATATGTGTGTATCCCATCTGGGCTGGTGAGGATCTTCACAATCTGGTGACGAAGAATTTCATCAATATAGCTAATTCACTAGAAGGTTGTATCAGTGAATATCTGAACTGTGTCGAATATAAGAGGATCCCTTCAAAAATTCTTACCTACCAAGTGGCTGATGATCCAGTTTACAATGGCTACAGATCAGCAGTAGAATCTATAAGCCAAGAGGAAGCTCTGGAAGCATTTGCAGTCTGGGAGCCACCCCATGGTCCATACAAGATGATTAAATATCCTTGGAAAAACTATGTCAAAGTTAGTGGTGCATTAAGGTATTGCGCTTTCATGGTTATGGCACTGCATGGATGTATACTGTCTGAAATACAGGCACCTGCCGAAAGAAGACAGGTTTTTCGTAATGAGCTTCAGAGAGTAGGTACAGCAAGTGCCAAAGTGTTGAGAGAACTGGGGGAGAAAGTGAAAAAGATGGAGAAGTTGGGGTCAGGGGACATTCTCTATGAAGTTCATGAAGCAGCAGAAGAGTTGCAAAAAAAGGTGGATCGGAAGTCTTATCTTTTCGTCAATGCTGAAAACTGGGAAATAGGAACACGAGCCACAGCGGTGGATATTTCCCAGGAGCTTGGAAGCATGGATGAGGACAAAAGCTTACTTCAACATCACAGGTCTCAAAGTGAAACAGTCATCAACATAGACTCCATCCTTGCCTCAAAAAGTTGGGATAATAGGACGTGTAACCTGGCTAGTAATAACAACCAAACTACAGGAGTAACCCCAGAAAACTCGGTTGGGAAACCAAAATTCCGAACAACACATTCTCTGCCTAAAGATAATGATGCACTAAAGGAGGTGGAAGCGGGGGAGGATGAAGAAGAAGAAGAAGAAGAATCAAAGACATACGAAAGTGCCAGTGCTTTGTCTTTAGCAACATTCACATCCCTTCTCATAGAATTTGTTGCAAGACTTCAAAACGTAGTAGACTCATTCGAAGAATTAAGTGAGAAAGCAAAATTTAAGGATCCTATGGATTTGTCTGATGCATCGCAGAAAGTTGGCTTGTGGTCCAGGTTTAAAGGGTGTATAAAGTTTTGGAAAAGAGAGAGCAGTTTACCAGTTTAGAGGCCAATCCTTCTTGTCCATGCAATGACAGAAGACTATAGATTATATCCTTCTTGTCTGCAGATAAGGAGATGTTATAGCAGCTTACACAACTGGGAACTCGAATCGTCTTGGAAATGCAACATAGATTATATATCCTGACTCTGAAAAGTCTTAAACATTTGAATAGGCTAATTGCTCCTGCTGGTTAGTTTTCAATATATACCAACCTATCAATGTATTGAGCTAAAATTTTAGCAAAGTGTTCTGGGCTCCAGTGCATTAAGGTCTAACGGTAAATGTAGGTAATAGCATAAATGTACATTGAAATACATCTGTTTACTCTAATTTTTATATTGTTTATTGTGGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g119640.2.1SL2.50ch03:68196568..68200273610+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g119640.2SL2.50ch03:68196449..682006224,174+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g119640.2.1.1SL2.50ch03:68196449..68196956508+n/a
exonexon:Solyc03g119640.2.1.2SL2.50ch03:68197222..68197359138+n/a
exonexon:Solyc03g119640.2.1.3SL2.50ch03:68197459..68197728270+2
exonexon:Solyc03g119640.2.1.4SL2.50ch03:68197836..68197972137+2
exonexon:Solyc03g119640.2.1.5SL2.50ch03:68198055..68198201147+2
exonexon:Solyc03g119640.2.1.6SL2.50ch03:68199524..682006221,099+n/a
intronintron:Solyc03g119640.2.1.1SL2.50ch03:68196957..68197221n/a+n/a
intronintron:Solyc03g119640.2.1.2SL2.50ch03:68197360..68197458n/a+n/a
intronintron:Solyc03g119640.2.1.3SL2.50ch03:68197729..68197835n/a+n/a
intronintron:Solyc03g119640.2.1.4SL2.50ch03:68197973..68198054n/a+n/a
intronintron:Solyc03g119640.2.1.5SL2.50ch03:68198202..68199523n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17778695%2Fdetails feature 17778695
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