Notice: Due to a wide-spread power outage in the area, SGN was unavailable early on Sunday. We apologize for the inconvenience.

Solanum lycopersicum mRNA Solyc03g120500.2.1

mRNA details  
Name
Solyc03g120500.2.1
Type
mRNA
Length
1,255
Organism
Solanum lycopersicum
Description
Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
Location(s)
SL2.50ch03:68877662..68879777
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
Length
2116
Nb exon
5
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g120500.2.1 Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein

CTTTTCTGCATCAACAAAATTAAACAACCTCTTCCTTTCTCTTGTAACTTTTTCTTTAAAAAAAGTTTTTTTCTTTTTCATCTCTTCCATAGTTTCTTGAATTCTTGTAGAGAAATTCATCTTGTCTGTTTACTAATTTGTGCTCAACTTTCCATGTCTGTACCATTAGAACATGATTATATAGGTTTATCAGAACCTTCTTTAATGGAAAGAAGTTCTGATAAGATTTCTTCTTCTTCTTCTTCCTCTGTTCTAAACCTTAAGGAGACTGAGCTGAGACTTGGGTTGCCTGGTTCTGAGTCTCATGGGGTTTCTCTTTTTGGCAAAGATTTGGACCCTTTAAGCAATTTTACATCAAGAACAAAAAGGGGTTTTTCTGATGCAATTGATGCATCTGGAAAATCGGATTTGTCTATTAATTGCAGATCTGAAGCTGATAGGGAAAACGGGAACTTGTTGTTTTCCCCAAAAAGAGGGAATGGAGGTTCAAACCCTGTTGAAGAAAAAAAGCCTATCCCTCATACTTCAAAGGCACAAGTGGTAGGATGGCCACCAATTAGATCATTCAGGAAAAATACACTGGCTACTAAGAAAAATGATGATGAAGGGAGAACAGGTTCAAGTTGCCTTTATGTTAAGGTTAGCATGGATGGTGCTCCATATCTGAGGAAAGTTGATATCAAAACTTACAGTAACTATGCAGCGCTCTCATCAGCACTTGAAAAGATGTTCAGCTGCTTTAGTATTGGTCAGTGTGCCAGTGATAAGATTCCAGGGCAAGAGAAGCTCAGTGAAAGTCACTTGATGGATCTTCTCAATGGTTCTGAGTATGTGCTGACTTATGAGGACAAGGATGGTGATTGGATGCTAGTTGGCGATGTTCCTTGGGAGATGTTCATAGACTCATGCAAGAGATTGCGGATCATGAAGAGCTCAGAGGCAATTGGGCTAGCTCCAAGGGCCATAAATAAGTGCAAGAACCAAAATTAGTGACTGAAAGACTAACCGTCCAAAGGGTTTCTACAACGTCAACCATCCTTTTTCTGCCCTGTTTGTATCTGGAATTAGACTAGATGTGTAGCATCCCCTGAAAGGGAGAGAGCTGGTTTAAGAAAATATAACCGGTCAAAAATTGTACTGTGGCTAGTGTCTTTTGAGTGGCAATTTTTGCTTGCACATGCAACCTGCAAGTTTATTTGCAAACATACATTAATTTTTAAGCATATAACCAACCAACTATTATTCTGATGAAACA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g120500.2.1SL2.50ch03:68877926..68879624279-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g120500.2SL2.50ch03:68877662..688797772,116-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g120500.2.1.1SL2.50ch03:68879248..68879777530-1
exonexon:Solyc03g120500.2.1.2SL2.50ch03:68878917..68879134218-2
exonexon:Solyc03g120500.2.1.3SL2.50ch03:68878254..68878395142-1
exonexon:Solyc03g120500.2.1.4SL2.50ch03:68878090..6887815162-2
exonexon:Solyc03g120500.2.1.5SL2.50ch03:68877662..68877964303-n/a
intronintron:Solyc03g120500.2.1.2SL2.50ch03:68879135..68879247n/a-n/a
intronintron:Solyc03g120500.2.1.3SL2.50ch03:68878396..68878916n/a-n/a
intronintron:Solyc03g120500.2.1.4SL2.50ch03:68878152..68878253n/a-n/a
intronintron:Solyc03g120500.2.1.5SL2.50ch03:68877965..68878089n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17779887%2Fdetails feature 17779887
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)