Solanum lycopersicum mRNA Solyc03g123640.2.1

mRNA details  
Name
Solyc03g123640.2.1
Type
mRNA
Length
2,543
Organism
Solanum lycopersicum
Description
Pumilio domain-containing protein c (AHRD V1 **-- B6K1Y8_SCHJY); contains Interpro domain(s) IPR011989 Armadillo-like helical
Location(s)
SL2.50ch03:70434546..70441715
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005488
  • GO:0003723
Length
7170
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g123640.2.1 Pumilio domain-containing protein c (AHRD V1 **-- B6K1Y8_SCHJY); contains Interpro domain(s) IPR011989 Armadillo-like helical

ATGTTATTGGTCCTTCGACAAATCACCCCATTACGAACGACGTTGCAGAAAAATCATCACTTCCTCCTCCGTCTTGCTGCCCTCATTGCTGTTCCTATGGTTTCTGTAGGTCTGCATGCTTTAGTTTCAAGAAAGCATAGAGGCTGTGATTTGACGGAGCAACCAACTGCTTGGGAGAACCAAACGAATAATCAGGGGGTAAGGAAAAGAACAATGGGCCGAAAGACTTCGAAAAAGCATGCTGGAGTTAACACTGACTATACTGTTGAAAGTGTGTCTGGAGGGAATGCCGATGACAATGATAGACCTCACAAGGACAAAAAGACAACCCCTGTCCCACAGACATCATTTCTCAGAAAGCAGATTGATCCTGAGACTGCAAAATACTTTGCAGAGATTGCTAATGCCATAGAAGGTACTGAAATTGACCCAGAGGAGCGATCTGTCATTTGTGGAAATGCCTTGGAAGAAACCAGAGGGAAAGAAGCAGAACTTGCAACTGATTATATAATAAGCCATACTTTGCAAACCCTACTTGAAGGCTGTTCTTTGGATCACCTTTGTACTTTCCTTCAGAGCTGTGCAAAGAATTTCTCTCATATTGCAGCTGACAGATCTGGTTCTCATGTAGTTGAAACAGCTTTAAAATCTTTATCTTTTCACCTTCAGGATAATGAGAATCATTCTCTGATTGAACATGCTCTGAAAAAAATCTGTAAGGCAATTGTTGTCAATCCTGTAGATATAATGTGCAACTGTCATGGATCTCATGTGCTTCGGAGTCTTCTCTGTCTATTCAAAGGCGTGCCTTTAGAAGAGTTCCATTCCACAAAGTCATCAGTTGGCTTGGCCGAGCGCTTGAATCTCAAGGCACCTCATGCAAAAAACGTCTCACTGCAACCTGTGCAAATATTTCCTAGTTTGCTTAAAAAATTCGTATCAGAGATGTTAAATACTGCCAGCGAAGACATTTCGAAACTTCAAATGAATCAATACAGCAGTTTAGTTCTGCAGACTGTTTTGAAATCATTGGCCGGAAATGAACAAGAGTTGTTGCATTTAATTCGAGTTCTTCTTGGAAGCAGTGCTGGAAGTGCCAATGCTGGAAACTTGTTAGAAGGAATACCCATACGGAACATTTTAAGGCTAGTGGAAGAAACTGCATACAGTCATTTAATGGAGGCCATCCTGGAATTTGCTCCTGAAACATTGTACGATGAGTTGTTAACGAAAGTTTTCAGGAAGTCATTGTTTCGCATGTCATCTCATCACTGTGCAAACTTTGTTGTGCAGGCTTTAGCATCTCATGCCAAAAGTCAGGATCATATGGACTTGATCTGGGAGGAGCTTGGTACAAAGTTTCGCGATCTTTTTGAAATGGGAAAGTCTGGAGTTGTTGTTTCTGTCCTTGCTGCAACTCAAAGACTCCACAGCCATGAACATGAGTGTTGTCAGGCCATTGCTGCTTCTGTATGCACAGGGGATGAGTTTCCCAAGGGTATCGTCCCCCGAATATTATTTCTTGAAAATTTCTTTTGCTCAAGAGACAAATCGAACTGGAGTTGGCCACATGGAACAAAGATTCATGTCGTTGGATCTTTGATTCTGCAGTCGATATTTAGACTTCCTAGTGAACTAATACAGGTGTACATTACTAGTATCACATCTTTAGAAGAACATCATGTTCTCGAGGCATCGAAAGATCCTAGTGGTTCACGGTTCATTGAATCTTTTCTCAACTCGAATATATCGGGAAAGCAAAAGAGGAAGTTAGTTGCCAAGCTTCGAGGACATTTTGGTGAACTCTCAGTGCACCCATTTGGTTCATTTACTGTTGAAAAGTGCTTCACTGCTAGTAACTTGAATCTGAGAGAGACAATAGTATCGGAAATGTTACCTCTCCAACCAGAGTTATCCAAGTCTAAGCAGGGACCTTACCTACTGAGGAAACTTGATATTGATGGATTTGCAAGGCAACCCGACCTGTGGAAGTCAAGACAAGCTTCACAACAATCTGCTCTGAAAGAATTTTATGCTACATTTGGACCAAAGGAAACCAAATCATTTGAAAAGGAGAGCTTTCTTGCTGATACTGTTTCCAAATCAAAGCCAGGAAAGTTAAAAGACATTAGGAAAGAGATTGAGACAACTTTAGCTTCTGCCAAAACTTCAATTACCCCCTTCTTGGCTCATCAGGTTTCAAAAAAAGTGAAAAGGTCTAAAGACGAGAAGAAAAGGCATAGGAAAGATGGCGAGTCAGAATCTAAAAGAAAGAAGATCAAAGTTTAACTGTTATGCTTTTAGGTTCTTTATTGAATTTTACATTACTGTATCTGAGCTCTCAGTTTTGGTTACTTTCTGTTGTTTGATCAGAAATGATGGAACTTCTATTGGATGCCGAAAACACTTAATTTTGTTGATTCTAGTTAAATTATTCATTGGTAAGTTTAAATGGTTGGTTCATATATATGTACTGTTATGAAGAACTTAATAGTATTCACATTTATAAAACTTTTGGAAATACATCTAACAACATATTACAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g123640.2.1SL2.50ch03:70434545..70441461763+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g123640.2SL2.50ch03:70434546..704417157,170+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g123640.2.1.1SL2.50ch03:70434546..7043464196+n/a
exonexon:Solyc03g123640.2.1.10SL2.50ch03:70440421..70440603183+1
exonexon:Solyc03g123640.2.1.11SL2.50ch03:70441137..70441715579+1
exonexon:Solyc03g123640.2.1.2SL2.50ch03:70436247..70436506260+n/a
exonexon:Solyc03g123640.2.1.3SL2.50ch03:70436615..70436978364+1
exonexon:Solyc03g123640.2.1.4SL2.50ch03:70437361..70437654294+n/a
exonexon:Solyc03g123640.2.1.5SL2.50ch03:70437884..70438051168+n/a
exonexon:Solyc03g123640.2.1.6SL2.50ch03:70438815..70438958144+n/a
exonexon:Solyc03g123640.2.1.7SL2.50ch03:70439259..70439378120+n/a
exonexon:Solyc03g123640.2.1.8SL2.50ch03:70439716..70439901186+n/a
exonexon:Solyc03g123640.2.1.9SL2.50ch03:70440186..70440334149+n/a
intronintron:Solyc03g123640.2.1.1SL2.50ch03:70434642..70436246n/a+n/a
intronintron:Solyc03g123640.2.1.10SL2.50ch03:70440604..70441136n/a+n/a
intronintron:Solyc03g123640.2.1.2SL2.50ch03:70436507..70436614n/a+n/a
intronintron:Solyc03g123640.2.1.3SL2.50ch03:70436979..70437360n/a+n/a
intronintron:Solyc03g123640.2.1.4SL2.50ch03:70437655..70437883n/a+n/a
intronintron:Solyc03g123640.2.1.5SL2.50ch03:70438052..70438814n/a+n/a
intronintron:Solyc03g123640.2.1.6SL2.50ch03:70438959..70439258n/a+n/a
intronintron:Solyc03g123640.2.1.7SL2.50ch03:70439379..70439715n/a+n/a
intronintron:Solyc03g123640.2.1.8SL2.50ch03:70439902..70440185n/a+n/a
intronintron:Solyc03g123640.2.1.9SL2.50ch03:70440335..70440420n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17782724%2Fdetails feature 17782724
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