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Solanum lycopersicum mRNA Solyc04g005130.2.1

mRNA details  
Name
Solyc04g005130.2.1
Type
mRNA
Length
1,110
Organism
Solanum lycopersicum
Description
Transcription factor (AHRD V1 **** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch04:88365..92094
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
3730
Nb exon
6
Sifter term
GO:0030528
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g005130.2.1 Transcription factor (AHRD V1 **** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

GCATAAGTGAGGTGATGTGGAAACCACTCTCCTTAGAAGTGACTTCTTTTCAACTCCCGAGGCTCTGTCACTCTCCAAACAGATCTCATCTCTCACACTGCTTTCATCTTTTGTTCACCATTACTATGCTAATTATATATGCATTATTTTTTCTGTAATGGATCCTCATTCTACTATAATGAGTGCGTTTCAAACTGCGACTAATTTGGCGGAGATCTGGCCCTATCACCATCTTCTCGACCACACTACTAATCACGCCGCCACAAAGCGACGCGACGATGATGAATCTGCTATTGCAGTTTCAACTAGTGGAAATGCCTTGACTGAATCTGATAGTAAGCGGCTGAAGGCCACAAGATCAAACGAGAATGGGGAATATTCAGGAGGGAATTCAGGAAAATCTTCAGACCAACCTGCAAAGCCACCAGCTGAACCACCTAAGGACTACATCCATGTGCGAGCGAGGAGAGGTCAAGCTACCGATAGTCATAGCCTAGCAGAAAGAGCCAGAAGAGAAAAGATTAGTGACAGGATGAAAATCCTACAAGACTTGGTCCCTGGTTGTAACAAGGTTATTGGAAAAGCTCTTGTCCTTGATGAGATAATCAATTATGTCCAATCATTACAACGTCAGGTTGAGTTCCTATCAATGAAGCTTGAAGCAGTTAATACAAGAGTAACCCCAACCATCGAAGGAATTCCTACTAAAGACTTTGGGCAGCAAACATTCGAGACAAACGCTATGGCATTTGGTTCACAAGGTACAAGGGAATATGCTGGGGGGACATCACCAGACTGGTTGCACATGCAGATAGGTGGTGGATTTGAAAGAACGACATAAAGTAAATAATTGGAGGCATCAAAGGCTAATAAATTCTTAGGAGGCTAATGCTTCCTCCAGGAACTGCCAAAATATATAACAGTTCCTTGATTTATAGGTAGATAACTGATCAGGAACAGATTTTTTGTATCATGTATGTCTTTAGGACACCGCGAACCAAATCATCATCTCCTTTCCTCCTTTAATTTAACAGCACATTTCTTTCAAATCAACTGAAACAAAAATGCTAAATGAATAGTACACGGGTGAGAATGCGTATTTAAGCATTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g005130.2.1SL2.50ch04:88633..91937228-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g005130.2SL2.50ch04:88365..920943,730-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g005130.2.1.1SL2.50ch04:91773..92094322-n/a
exonexon:Solyc04g005130.2.1.2SL2.50ch04:90896..91078183-n/a
exonexon:Solyc04g005130.2.1.3SL2.50ch04:90719..9078466-n/a
exonexon:Solyc04g005130.2.1.4SL2.50ch04:89541..8960969-n/a
exonexon:Solyc04g005130.2.1.5SL2.50ch04:89398..8946972-n/a
exonexon:Solyc04g005130.2.1.6SL2.50ch04:88365..88762398-n/a
intronintron:Solyc04g005130.2.1.2SL2.50ch04:91079..91772n/a-n/a
intronintron:Solyc04g005130.2.1.3SL2.50ch04:90785..90895n/a-n/a
intronintron:Solyc04g005130.2.1.4SL2.50ch04:89610..90718n/a-n/a
intronintron:Solyc04g005130.2.1.5SL2.50ch04:89470..89540n/a-n/a
intronintron:Solyc04g005130.2.1.6SL2.50ch04:88763..89397n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17783492%2Fdetails feature 17783492
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