Solanum lycopersicum mRNA Solyc04g005280.2.1

mRNA details  
Name
Solyc04g005280.2.1
Type
mRNA
Length
1,221
Organism
Solanum lycopersicum
Description
BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Location(s)
SL2.50ch04:205332..212148
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0045449
Length
6817
Nb exon
7
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g005280.2.1 BHLH transcription factor (AHRD V1 *-** Q401N4_9LILI); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

ATGAGACTGGTATTGTTAAGAAGGATGCCACACCTTCTAGCAGTAATACCAAAGGTCTATGGGAAGAGTAATGAGAAGGCTAGTGCCCTAAGGTCTAAACATTCAGTGACTGAGCAGCGTCGAAGGAGCAAGATCAATGAGAGATTTCAGATATTGAGAGATCTGATACCCCATACTGATCAAAAGCGAGACACTGCATCATTCTTGTTGGAGGTAATTCAGTACGTACAGTATTTACAGGAGAAGGTACAGAAGTATGAAGGACCATATCAGCCTTGGAGCTCAGAGCCTACAAAGCTTATGCCATGGAGAAACAGTCATTGGCGCATGCAAAGTTTACCTGCACAGCCACATGCCTTGAAGAATGGTAGTGGCCCAGAATCAACATACCTGGGAAGGTTTGATGAAAATCTCGCTACTGTTACTTCTACGATGCAACCAAATCAGCAGAATCCAATTGAATCTCATACTAGCAGGGATGTATCATTTAAAGCACTTGATCAACAAAATGAACTAGCTAACAAGTCAATCACAACACCCATTCCTCTTCAGGCCGGTATGAAGATGTCAGTGCCAAACAATAGTGCTTTCTCAGAGCCTCAACCCAGACCAGTGTCTGATCAATGTCCTAACACAATTGATGCTCTGAATCATGACGAGGATGACGTAATAGATGGAGGCAGAATCAGCCTTTCAAGTTCATACTCGCAGGGGTTTCTAACTTCGTTGTCGCAAGCGCTGCAGAGTACTGGTCTAGATCTTTCAAAGGCTACTATCTCAGTGCAGATTGATTTTGGGAAGCGCGCAAACCAAGCAATGACCTCAGGGCCATCTATTGCGAAGGATGACGAGAATCCTACTCTCTCTGGTCATCAACATACGGATCATTTCAGAGAGGCAAGCAATGACGAAGATATGAACCAAGCTCAAAAGAGGCTGAAGATATAGATATTACAGTAGCATGGTCATTCCCAGCTAAATCAACTTAGTTTTGTGTTTACCATATGCTTCAATAGAAGTTTATATGTATATCCCATTTGTTTTTTCGTCCCCAAATCATATGTTCATAGAAATACATCCTTTTTACTTCTCTTCCCTTTTCATTTTGATGTTTTCTTTTTCTTCTCAGGTGTGGTTTCATCTTCCTTGTGTTTGGTTTAATCTCGCAATATTCAGATTTATCAGGAGGTTTATAATTGATATCTAGTACAGTATGCTGTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g005280.2.1SL2.50ch04:205331..211875316+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g005280.2SL2.50ch04:205332..2121486,817+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g005280.2.1.1SL2.50ch04:205332..20538958+n/a
exonexon:Solyc04g005280.2.1.2SL2.50ch04:205543..20562785+2
exonexon:Solyc04g005280.2.1.3SL2.50ch04:207682..20775170+1
exonexon:Solyc04g005280.2.1.4SL2.50ch04:207851..20794696+n/a
exonexon:Solyc04g005280.2.1.5SL2.50ch04:209926..210329404+n/a
exonexon:Solyc04g005280.2.1.6SL2.50ch04:211467..211596130+1
exonexon:Solyc04g005280.2.1.7SL2.50ch04:211771..212148378+n/a
intronintron:Solyc04g005280.2.1.1SL2.50ch04:205390..205542n/a+n/a
intronintron:Solyc04g005280.2.1.2SL2.50ch04:205628..207681n/a+n/a
intronintron:Solyc04g005280.2.1.3SL2.50ch04:207752..207850n/a+n/a
intronintron:Solyc04g005280.2.1.4SL2.50ch04:207947..209925n/a+n/a
intronintron:Solyc04g005280.2.1.5SL2.50ch04:210330..211466n/a+n/a
intronintron:Solyc04g005280.2.1.6SL2.50ch04:211597..211770n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17783653%2Fdetails feature 17783653
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