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Solanum lycopersicum mRNA Solyc04g005320.2.1

mRNA details  
Name
Solyc04g005320.2.1
Type
mRNA
Length
922
Organism
Solanum lycopersicum
Description
MADS-box transcription factor (AHRD V1 **** Q8S4L4_SOLLC); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
Location(s)
SL2.50ch04:228307..233354
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
5048
Nb exon
8
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g005320.2.1 MADS-box transcription factor (AHRD V1 **** Q8S4L4_SOLLC); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box

ATGGGAAGAGGTAAGGTAGAATTGAAGAGAATAGAAAATAAGATAAACAGGCAAGTTACTTTTGCTAAGAGAAGAAATGGATTACTCAAAAAAGCTTATGAGCTTTCTATTTTGTGTGAAGCTGAAGTTGCTCTTATCATTTTCTCTAATAGAGGCAAACTCTATGAATTTTGCAGTACCTCTAGTATGTCTGATACACTGGAGAGATACCATAGATGCAGCTATGGTGACCTTGAAACTGGCCAGTCTTCAAAGGATTCACAGAATAACTACCAAGAGTATATGAAGCTGAAAGCAAGAGTTGAAGTGCTACAACAGTCACAAAGGCATATACTTGGAGAGGACTTAGGACAATTAAACACAAAAGATTTGGAACAGCTTGAGCGTCAACTGGATTCATCTTTGAGGCTAATAAGATCAAGAAGGACACAAAACATGCTTGATCAACTTTCTGATCTTCAACAAAAGGAACAATCTCTTCTTGAAATCAACAGATCCTTGAAAACAAAGTTGGAAGAAAACTCTGTAGCACATTGGCATATCACTGGAGAGCAAAATGTACAATTCAGACAACAACCTGCTCAGTCAGAGGGGTTCTTTCAGCCTTTACAATGCAATACTAATATAGTGCCAAACAGGTACAATGTGGCTCCATTGGATAGTATAGAACCATCAACACAGAATGCTACTGGAATTTTACCAGGATGGATGCTTTGAATGGGAAACAAGCAATTAAGTGGTTGAAAGTTTGAGATTGGAAACTAAGAACCAATAAATGTAATTTCTTGCATACATACAAGTTGAGTTTTTTGTGTTTCAAAGACTAACTAGCTTGCATGTTTAGTAAACTATAATGATATATATATAAATATGTCATGTAATAAGTCAAACATACATTTCTATTTTGGACCATTTCTCGACT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g005320.2.1SL2.50ch04:228511..233354239-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g005320.2SL2.50ch04:228307..2333545,048-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g005320.2.1.1SL2.50ch04:233170..233354185-1
exonexon:Solyc04g005320.2.1.2SL2.50ch04:231312..23139079-n/a
exonexon:Solyc04g005320.2.1.3SL2.50ch04:231048..23110962-1
exonexon:Solyc04g005320.2.1.4SL2.50ch04:230676..230775100-n/a
exonexon:Solyc04g005320.2.1.5SL2.50ch04:229804..22984542-n/a
exonexon:Solyc04g005320.2.1.6SL2.50ch04:229663..22970442-n/a
exonexon:Solyc04g005320.2.1.7SL2.50ch04:229036..229163128-1
exonexon:Solyc04g005320.2.1.8SL2.50ch04:228307..228590284-n/a
intronintron:Solyc04g005320.2.1.2SL2.50ch04:231391..233169n/a-n/a
intronintron:Solyc04g005320.2.1.3SL2.50ch04:231110..231311n/a-n/a
intronintron:Solyc04g005320.2.1.4SL2.50ch04:230776..231047n/a-n/a
intronintron:Solyc04g005320.2.1.5SL2.50ch04:229846..230675n/a-n/a
intronintron:Solyc04g005320.2.1.6SL2.50ch04:229705..229803n/a-n/a
intronintron:Solyc04g005320.2.1.7SL2.50ch04:229164..229662n/a-n/a
intronintron:Solyc04g005320.2.1.8SL2.50ch04:228591..229035n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17783699%2Fdetails feature 17783699
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