Solanum lycopersicum mRNA Solyc04g005710.1.1
 mRNA details
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| Name | Type | Organism | |
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Synonyms / aliases
mRNA:Solyc04g005710.1.1
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Length
1,284
|
|
Description
Myb family transcription factor-like (AHRD V1 *-** Q8H5Q3_ORYSJ); contains Interpro domain(s) IPR015495 Myb transcription factor
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Location(s)
SL2.50ch04:459866..463173
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0003677
- GO:0045449
- Length
- 3308
- Nb exon
- 12
- Sifter term
- GO:0003700
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g005710.1.1 Myb family transcription factor-like (AHRD V1 *-** Q8H5Q3_ORYSJ); contains Interpro domain(s) IPR015495 Myb transcription factor
ATGAAGAAGACTAAAGGAAATAATTGTGATGGAGCCAAACCAAAAGAAAGACATATTGTGTCTTGGTCACAAGAGGAGGACGATATACTACGAGAGCAAATTCGTATTCATGGAATTGATGACAATTGGACTATCATAGCTTCAAACTTCAAGGATAAAACAACTAGACAATGCAAAAGAAGATGGTTCACTTATTTGAACTCCGATTTCAAAAAGGGAGGATGGTCACCCGAAGAAGATATGCTTTTATGCGCGGCTCAAAAGATCTTTGGAAACAGATGGACTGAAATTGCCAAAGTGGTATCAGGCAGAACGGATAATGCTGTGAAGAACAGGTTCACTACAATCTGCAAAAAGAAAGCAAAACATGAAGCAATGGCTGAAGAAAACAGGGTTACGTTATCAGATAAGCTCGATACTGATAGAATATGTGATGTTTCCGCTAAGAAGCTGAGGAGGAGCCGTACTATAGAAAGCTCGGTTGATGATTGTCCGAATAATAATCAACCGGTTAGACATCCATTTGCAGTGCTTGCTCAGAATGTCAATAACTTGAAAGAGACATATGAAAATGGAACGGTCCTTAAGAAGAATGATCGAAATATGTTGATGCAACAAGGCTCACTGGCACTCAAAGTTAATTCGGAAAACAGTAACCAGCGTCTTGAAAATGCTTGGATGGTAGTCGATGATTTTCTTCATCGTATGAAGGAAGGTGATATGCTCAAGTTCCGGCATACAGAGATGAATTCTGCACACAATACTCATAAGAATCTGATAACAAACTCAAGTAGTAACGAAAGGAACCGATCATCTAAAAGGCAACTTGCTTTATCTCAAGAGTCTGGTGACAGTTCAGAGTACAATACCGGATCAACTCAGCTGTCGCGTGCATTGAGTAATAAAACAGAAGAAAGTCAAGTTAAGACGTGTACGCATGATCAGGAGATTCAATCTGGTTTGCAAAATTCTCAAATAAGTGATCAAACTGGAGTACAAGAGTTGGAAAATGGAATTTTCTGTGATCTATCATTCCCTCATGATACTCGGTCTGTTTGTGATGAAATGAAGCACAATGATGTATCAGCAACAGATGGATGTGAATATCCTTCTCCTCTCCAAGTAACTCCGCAATTCAGATCATTAGCTGAAGCAATTCCCAGCCCAAAATTCTCCGAAAGTGAGAGACAATTCCTATTGAAGACACTTGGAGTTGAGTCTACATCCCCTCATCGAACCACGAAACCTCCATCTTGCAAAAGGGCGCTCCTTCAAAGTCTATGA
ATGAAGAAGACTAAAGGAAATAATTGTGATGGAGCCAAACCAAAAGAAAGACATATTGTGTCTTGGTCACAAGAGGAGGACGATATACTACGAGAGCAAATTCGTATTCATGGAATTGATGACAATTGGACTATCATAGCTTCAAACTTCAAGGATAAAACAACTAGACAATGCAAAAGAAGATGGTTCACTTATTTGAACTCCGATTTCAAAAAGGGAGGATGGTCACCCGAAGAAGATATGCTTTTATGCGCGGCTCAAAAGATCTTTGGAAACAGATGGACTGAAATTGCCAAAGTGGTATCAGGCAGAACGGATAATGCTGTGAAGAACAGGTTCACTACAATCTGCAAAAAGAAAGCAAAACATGAAGCAATGGCTGAAGAAAACAGGGTTACGTTATCAGATAAGCTCGATACTGATAGAATATGTGATGTTTCCGCTAAGAAGCTGAGGAGGAGCCGTACTATAGAAAGCTCGGTTGATGATTGTCCGAATAATAATCAACCGGTTAGACATCCATTTGCAGTGCTTGCTCAGAATGTCAATAACTTGAAAGAGACATATGAAAATGGAACGGTCCTTAAGAAGAATGATCGAAATATGTTGATGCAACAAGGCTCACTGGCACTCAAAGTTAATTCGGAAAACAGTAACCAGCGTCTTGAAAATGCTTGGATGGTAGTCGATGATTTTCTTCATCGTATGAAGGAAGGTGATATGCTCAAGTTCCGGCATACAGAGATGAATTCTGCACACAATACTCATAAGAATCTGATAACAAACTCAAGTAGTAACGAAAGGAACCGATCATCTAAAAGGCAACTTGCTTTATCTCAAGAGTCTGGTGACAGTTCAGAGTACAATACCGGATCAACTCAGCTGTCGCGTGCATTGAGTAATAAAACAGAAGAAAGTCAAGTTAAGACGTGTACGCATGATCAGGAGATTCAATCTGGTTTGCAAAATTCTCAAATAAGTGATCAAACTGGAGTACAAGAGTTGGAAAATGGAATTTTCTGTGATCTATCATTCCCTCATGATACTCGGTCTGTTTGTGATGAAATGAAGCACAATGATGTATCAGCAACAGATGGATGTGAATATCCTTCTCCTCTCCAAGTAACTCCGCAATTCAGATCATTAGCTGAAGCAATTCCCAGCCCAAAATTCTCCGAAAGTGAGAGACAATTCCTATTGAAGACACTTGGAGTTGAGTCTACATCCCCTCATCGAACCACGAAACCTCCATCTTGCAAAAGGGCGCTCCTTCAAAGTCTATGA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
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| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g005710.1.1 | SL2.50ch04:459865..463173 | 428 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g005710.1 | SL2.50ch04:459866..463173 | 3,308 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g005710.1.1.1 | SL2.50ch04:459866..459940 | 75 | + | n/a |
| exon | exon:Solyc04g005710.1.1.10 | SL2.50ch04:462486..462706 | 221 | + | 1 |
| exon | exon:Solyc04g005710.1.1.11 | SL2.50ch04:462815..462954 | 140 | + | 2 |
| exon | exon:Solyc04g005710.1.1.12 | SL2.50ch04:463072..463173 | 102 | + | n/a |
| exon | exon:Solyc04g005710.1.1.2 | SL2.50ch04:460180..460229 | 50 | + | n/a |
| exon | exon:Solyc04g005710.1.1.3 | SL2.50ch04:460713..460769 | 57 | + | 1 |
| exon | exon:Solyc04g005710.1.1.4 | SL2.50ch04:460884..460956 | 73 | + | 1 |
| exon | exon:Solyc04g005710.1.1.5 | SL2.50ch04:461168..461223 | 56 | + | n/a |
| exon | exon:Solyc04g005710.1.1.6 | SL2.50ch04:461313..461456 | 144 | + | 1 |
| exon | exon:Solyc04g005710.1.1.7 | SL2.50ch04:461540..461658 | 119 | + | 1 |
| exon | exon:Solyc04g005710.1.1.8 | SL2.50ch04:461759..461865 | 107 | + | 2 |
| exon | exon:Solyc04g005710.1.1.9 | SL2.50ch04:462280..462419 | 140 | + | n/a |
| intron | intron:Solyc04g005710.1.1.1 | SL2.50ch04:459941..460179 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.10 | SL2.50ch04:462707..462814 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.11 | SL2.50ch04:462955..463071 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.2 | SL2.50ch04:460230..460712 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.3 | SL2.50ch04:460770..460883 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.4 | SL2.50ch04:460957..461167 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.5 | SL2.50ch04:461224..461312 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.6 | SL2.50ch04:461457..461539 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.7 | SL2.50ch04:461659..461758 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.8 | SL2.50ch04:461866..462279 | n/a | + | n/a |
| intron | intron:Solyc04g005710.1.1.9 | SL2.50ch04:462420..462485 | n/a | + | n/a |
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