Solanum lycopersicum mRNA Solyc04g008040.2.1

mRNA details  
Name
Solyc04g008040.2.1
Type
mRNA
Length
2,446
Organism
Solanum lycopersicum
Description
microtubule associated protein Type 1 (AHRD V1 **-* Q9C9X0_ARATH); contains Interpro domain(s) IPR009768 Myosin II heavy chain-like
Location(s)
SL2.50ch04:1700710..1706396
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
5687
Nb exon
12
Sifter term
GO:0008017
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g008040.2.1 microtubule associated protein Type 1 (AHRD V1 **-* Q9C9X0_ARATH); contains Interpro domain(s) IPR009768 Myosin II heavy chain-like

TGGTGACAGACTAACGATTTTTCATGTACCTACTAGCTGCGTCCCATGTGAGCTTGACCGATATACAAGAGACAATTAATTAGTTACAAATTTTGATATTTAATGAAAAAAATTTTGTTTCAAAATGCTAATTTAAATTAGTTAAACAACAGATTTATCTCTTTATAAATATCTATATAATCATTTCCATCTGTACAACTGGTTGTAAATATGAATTATTCATTGAAAGTGAGCTTACCGTAGAAGTTTATAGATCGGAGATGGCGGAGGTTTCCGGCGATAACAGCTACAATGTGCGACAGCCGACGAGTGACACAGCAGGTTATACAACGCCGTTGACGGTATCAGCTTCGTTCAAGGAAGGGAAGACTTACCGGAGAAGGACGTCCATGAGGCCAAGCCTTGACGCCGATGAGTTCTTAAACCTTCTCCACGGATCGGATCCGGTGAAATTGGAGCTTAATCGACTGGAGAATGAACTTAGAGATAAGGACCGAGAATTGTCTGAGGCTCAGGCGGAGATCAAGTCATTGAGATTGTCAGAGCGCTTACGAGAAAAGGCTGTTGAAGAGCTTACGGACGAGTGGTCAAGGGTTGACGAGAAGCTCAAGCTGACTGAGTCTCTTTTGGAAAGCAAGAATCTTGAAATTAAGAAAATTAATGAAGAGAAAAAGGCATCCATGGCAGCGCAGTTTGCAGCAGAAGCCACCCTTCGAAGGGTTCATGCTGCTCAAAAAGATGATGATATGCCTCCAATTGAAGCCATTCTTGCACCTTTGGAGGCTGAACTCAAGCTTGCTCGCCAGGAGATTGCAAAGCTACAAGATGATAATAAAGCACTGGACCGTCTTACTAAGTCAAAAGAAGCAGCTCTACTTGATGCTGAGAGAACAGTGCAGTCAGCATTAGCAAAGGCTTCTATGGTGGATGATCTTCAGAACAAGAATCAGGACTTGATGAAACAGATAGAGATATGCCAGGAAGAAAATAAAATATTAGACAGAATGCATCGACAAAAAGTTGCAGAGGTTGAAAAGCTTACCCAAACTGTACGTGAGCTTGAAGAGGCTGTTCTTGCTGGCGGTGCTGCTGCTAATGCTGTCCGGGATTACCAAAGAAAAGTTCAAGAGATGAATGAAGAACGAAAAACTCTTGACCGGGAGCTAGCACGTGCCAAGGTTACAGCTAATAGGGTAGCAACCGTGGTTGCTAATGAATGGAAAGATGCCAGTGATAAAGTAATGCCTGTTAAACAGTGGCTTGAAGAAAGGAAGTTTCTGCAGGGTGAGTTGCAACAGTTACGCGACAAGCTTGCAATCTCTGAACGAACTGCGAAATCTGAAGCCCAGTTGAAAGAGAAATATCATTTAAGGCTCAAGGTCCTTGAAGAGACATTAAAATCAACTAGCACAGGCGCCCGCACTATACCAGATGGAAGAAGTTCAAGCAACGGTCCTTCGCGTCGGCGATCACTGGGTGGTGCTGACAACATCTCCAAATTGACCTCCAATGGTATCTTACCCAAGAGATCACCATCATTTCAGCTGAGATCTTCTGGGGCCAGTACAGTGTTGAAGCATGCTAAAGGGACATCTAAGTCGTTTGATGGTGGTTCAAGATCTTTGGACAGGAGTAAAAAACTTCTGAATGGAACAGGTCCAAATTTCAACAGCAGCAAGTCATGTGATGTGTCCAAAGACAATGAGACTGAAAGCAATTCATGGAAAGCGAATCAAGATGAAAAACACAATGACTCGCAAATGGCAAGAACAGAGGATACTGTGCCAGGAGTTTTATATGATTTGCTGCAAAAAGAAGTAATTGCCTTGAGGAAAGCTGGTCATGAGAAGGATCAAAGTCTTAATGACAAAGACGACGCTATTGAGATGTTAGCAAAGAAAGTAGAGACTTTAACAAAAGCCATGGAAGTTGAGGCCAAAAAGATGAGAAGGGAAGTCGCTGCGATGGAGAAGGAGGTTTCTGCCATGCGTGTTGAGAAGGAACAAGAAAATAGAGCAAAAAGATTTGCAAATTCTAAGGGCCCAGTTAACAGTTCTCAGCCACTTCCAGGAAGGAATGTAGCACGGAATGGATTAATGCGAGGCACACAATAACATTCAAGGGAAAACCCGTAGAGGCAGCTGTAAGAAGCAACTCTGCATAGGCTTGGTGACATTTGAGTGTGCCTCTGACTTAGGCTATGATCCAAGCACGGTAAGCGATCAGCACGAACGGAACTCAAGCTATTGAAGTTGAATTAACCGTTTGGCAGAATATTTTCTATTGTAGTAATTGTGTGGTTGTATAGATAGCTTGTGTTGGCACTTACTTCGCCTACTTTATTCCATGTTGTTTGCAGTCTATATTTGTAATCTGCAGCTCAAGTGATATGTTATTGGTTCAGGTTTGTCAATATTCTAGTAATCAGATCAATACTAATGTGTTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g008040.2.1SL2.50ch04:1700969..1705955618+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g008040.2SL2.50ch04:1700710..17063965,687+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g008040.2.1.1SL2.50ch04:1700710..1701195486+n/a
exonexon:Solyc04g008040.2.1.10SL2.50ch04:1704233..1704420188+n/a
exonexon:Solyc04g008040.2.1.11SL2.50ch04:1705916..170601095+n/a
exonexon:Solyc04g008040.2.1.12SL2.50ch04:1706120..1706396277+1
exonexon:Solyc04g008040.2.1.2SL2.50ch04:1701287..170137286+n/a
exonexon:Solyc04g008040.2.1.3SL2.50ch04:1702238..170230366+2
exonexon:Solyc04g008040.2.1.4SL2.50ch04:1702390..1702560171+n/a
exonexon:Solyc04g008040.2.1.5SL2.50ch04:1702654..1702824171+n/a
exonexon:Solyc04g008040.2.1.6SL2.50ch04:1702943..1703098156+n/a
exonexon:Solyc04g008040.2.1.7SL2.50ch04:1703195..1703341147+n/a
exonexon:Solyc04g008040.2.1.8SL2.50ch04:1703455..170352672+n/a
exonexon:Solyc04g008040.2.1.9SL2.50ch04:1703619..1704149531+n/a
intronintron:Solyc04g008040.2.1.1SL2.50ch04:1701196..1701286n/a+n/a
intronintron:Solyc04g008040.2.1.10SL2.50ch04:1704421..1705915n/a+n/a
intronintron:Solyc04g008040.2.1.11SL2.50ch04:1706011..1706119n/a+n/a
intronintron:Solyc04g008040.2.1.2SL2.50ch04:1701373..1702237n/a+n/a
intronintron:Solyc04g008040.2.1.3SL2.50ch04:1702304..1702389n/a+n/a
intronintron:Solyc04g008040.2.1.4SL2.50ch04:1702561..1702653n/a+n/a
intronintron:Solyc04g008040.2.1.5SL2.50ch04:1702825..1702942n/a+n/a
intronintron:Solyc04g008040.2.1.6SL2.50ch04:1703099..1703194n/a+n/a
intronintron:Solyc04g008040.2.1.7SL2.50ch04:1703342..1703454n/a+n/a
intronintron:Solyc04g008040.2.1.8SL2.50ch04:1703527..1703618n/a+n/a
intronintron:Solyc04g008040.2.1.9SL2.50ch04:1704150..1704232n/a+n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17785475%2Fdetails feature 17785475
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