Solanum lycopersicum mRNA Solyc04g008060.2.1
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Name | Type |
Length
1,127
|
Organism |
Description
Vacuolar iron transporter Ccc1 (AHRD V1 **-* C5GIS5_AJEDR); contains Interpro domain(s) IPR008217 Protein of unknown function DUF125, transmembrane
|
Location(s)
SL2.50ch04:1717764..1721092
|
Ontology term(s) |
GFF source
ITAG_eugene
|
- Length
- 3329
- Sifter term
- GO:0015093
![]() | spliced mRNA sequence, including UTRs |
>Solyc04g008060.2.1 Vacuolar iron transporter Ccc1 (AHRD V1 **-* C5GIS5_AJEDR); contains Interpro domain(s) IPR008217 Protein of unknown function DUF125, transmembrane
TCTGGAATTTCAGTTCCATTATATAGTAAAAATAAAAGTCAGAATATTATTGACAGATACTCAGAACTTTACCTGCTTCCATAAAAATCCAAAATACAAAAATCATCTTCCATTTTCTCTATAAGAACACTACACACAAACTCAAAAAATATATATATATAACAGAAGAAGAGAAACAAAAAAATTATTTTTATTTTTAAGATTATAATTTTTGTATTAGTAGAGAAATTGAGATATGGCTGGTGAATCGGAGCAATCGTTATTGGATCAACACAAGGAAAAGCATTTCACCGCCGGCGAGATTGTCCGGGATATAATAATCGGAGTTTCAGATGGACTGACGGTGCCGTTTGCATTGGCGGCGGGTTTATCAGGGGCAAATGCGTCATCTTCCATTATTCTTACCGCTGGAATTGCTGAAGTTGCTGCTGGTGCTATTTCCATGGGACTTGGAGGTTATTTGGCTGCAAAGAGTGAGGCTGATCACTATATGAGAGAGCTGAAAAGAGAGGAAGAAGAGATCATCTCTGTACCAGATACGGAAGCAGCGGAGATTGCAGAAATTTTGTCAGAGTATGGGATTCAGCCCCATGAATATTCACCGGTGGTGAATGCTTTGAGGAAGAACCGACAGGCATGGCTCGACTTTATGATGAAATTTGAACTTGGTTTAGAGAAGCCGGATCCAAGGAGAGCGCTGCAGAGTGCATTTACCATCGCGATTGCTTACATCTTGGGAGGATTTGTTCCTCTGGTTCCATACATGCTCATTCCTATCGCAAGACAGGCTGTCGTCGCCTCTGTTGTGGTAACTATACTAGCCTTGCTAATCTTCGGCTTCGCTAAAGGCTACTTCACCGGAAACAGGCCATTTAGGAGTGCTTTCGAAACTGCACTTATCGGAGCAGTTGCATCTGCTGCTGCTTTTGGCTTGGCCAAGGCTGTTCAAGGCTAGAGGACCTTGACATTTCATGTTTCTTGTAATGTAGTTTTTGTTGTTTTCATCTTTTGATTATGTAGACCTCTGCTATCTCACTAGTTTTATTTTGTGTACTACATGTTGGGACATTAGTTCTGAAGCTCACTTTTTGTTAATGTGCATTTTGTTGTTTTCGTTGTTAAAAAGT
TCTGGAATTTCAGTTCCATTATATAGTAAAAATAAAAGTCAGAATATTATTGACAGATACTCAGAACTTTACCTGCTTCCATAAAAATCCAAAATACAAAAATCATCTTCCATTTTCTCTATAAGAACACTACACACAAACTCAAAAAATATATATATATAACAGAAGAAGAGAAACAAAAAAATTATTTTTATTTTTAAGATTATAATTTTTGTATTAGTAGAGAAATTGAGATATGGCTGGTGAATCGGAGCAATCGTTATTGGATCAACACAAGGAAAAGCATTTCACCGCCGGCGAGATTGTCCGGGATATAATAATCGGAGTTTCAGATGGACTGACGGTGCCGTTTGCATTGGCGGCGGGTTTATCAGGGGCAAATGCGTCATCTTCCATTATTCTTACCGCTGGAATTGCTGAAGTTGCTGCTGGTGCTATTTCCATGGGACTTGGAGGTTATTTGGCTGCAAAGAGTGAGGCTGATCACTATATGAGAGAGCTGAAAAGAGAGGAAGAAGAGATCATCTCTGTACCAGATACGGAAGCAGCGGAGATTGCAGAAATTTTGTCAGAGTATGGGATTCAGCCCCATGAATATTCACCGGTGGTGAATGCTTTGAGGAAGAACCGACAGGCATGGCTCGACTTTATGATGAAATTTGAACTTGGTTTAGAGAAGCCGGATCCAAGGAGAGCGCTGCAGAGTGCATTTACCATCGCGATTGCTTACATCTTGGGAGGATTTGTTCCTCTGGTTCCATACATGCTCATTCCTATCGCAAGACAGGCTGTCGTCGCCTCTGTTGTGGTAACTATACTAGCCTTGCTAATCTTCGGCTTCGCTAAAGGCTACTTCACCGGAAACAGGCCATTTAGGAGTGCTTTCGAAACTGCACTTATCGGAGCAGTTGCATCTGCTGCTGCTTTTGGCTTGGCCAAGGCTGTTCAAGGCTAGAGGACCTTGACATTTCATGTTTCTTGTAATGTAGTTTTTGTTGTTTTCATCTTTTGATTATGTAGACCTCTGCTATCTCACTAGTTTTATTTTGTGTACTACATGTTGGGACATTAGTTCTGAAGCTCACTTTTTGTTAATGTGCATTTTGTTGTTTTCGTTGTTAAAAAGT
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unprocessed genomic sequence underlying each location of this mRNA |
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Features that derive from this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
polypeptide | Solyc04g008060.2.1 | SL2.50ch04:1717935..1720857 | 240 | - | n/a |
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Features this mRNA is a part of |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
gene | Solyc04g008060.2 | SL2.50ch04:1717764..1721092 | 3,329 | - | n/a |
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Features that are parts of this mRNA |
Type | Name | Location | Length | Strand | Phase |
---|---|---|---|---|---|
exon | exon:Solyc04g008060.2.1.1 | SL2.50ch04:1720637..1721092 | 456 | - | 1 |
exon | exon:Solyc04g008060.2.1.2 | SL2.50ch04:1719832..1719917 | 86 | - | 2 |
exon | exon:Solyc04g008060.2.1.3 | SL2.50ch04:1719070..1719184 | 115 | - | 1 |
exon | exon:Solyc04g008060.2.1.4 | SL2.50ch04:1717764..1718233 | 470 | - | n/a |
intron | intron:Solyc04g008060.2.1.2 | SL2.50ch04:1719918..1720636 | n/a | - | n/a |
intron | intron:Solyc04g008060.2.1.3 | SL2.50ch04:1719185..1719831 | n/a | - | n/a |
intron | intron:Solyc04g008060.2.1.4 | SL2.50ch04:1718234..1719069 | n/a | - | n/a |
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