Solanum lycopersicum mRNA Solyc04g025530.2.1

mRNA details  
Name
Solyc04g025530.2.1
Type
mRNA
Length
1,789
Organism
Solanum lycopersicum
Description
Glutamate decarboxylase (AHRD V1 **** Q1I1D8_CITSI); contains Interpro domain(s) IPR010107 Glutamate decarboxylase
Location(s)
SL2.50ch04:22348272..22352834
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006536
  • GO:0030170
  • GO:0019752
Length
4563
Nb exon
7
Sifter term
  • GO:0004351
  • GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g025530.2.1 Glutamate decarboxylase (AHRD V1 **** Q1I1D8_CITSI); contains Interpro domain(s) IPR010107 Glutamate decarboxylase

TTACCCAAATATAACTAAACAAAGTCATTATAATTTCCTCACTTTACGCCAAAGTTTAATTAAACTTCAATTATTTTTACTTGTTCTTAATTTATCTCCATTTTTACAACAATGGTTCTCTCAAAAACTTCCTCTGAGTCTGATGTTTCTGTACACTCCACCTTTGCTTCTCGCTATGTTCGAACTTCACTTCCAAGGTTTGAGATGCCAGAAAATTCTATCCCAAAAGAGGCAGCATACCAAATAATTAATGATGAGTTGATGCTTGATGGCAATCCAAGGTTGAATTTGGCATCATTTGTGACAACATGGATGGAGCCAGAATGTGATAAGCTTATGATGTCTTCAATTAACAAGAATTATGTTGACATGGATGAATACCCTGTTACCACTGAGCTTCAGAATCGATGTGTGAATATGATAGCACGTTTATTCAATGCGCCTTTAGAAGAGGAAGAAGCAGCAATTGGTGTTGGCACAGTGGGGTCATCAGAGGCCATAATGTTAGCGGGCCTAGCCTTCAAGAGGAACTGGCAAAACAAACGCAAAGCTGAGGGAAAGCCTTATGATAAGCCCAATATTGTTACTGGCGCTAATGTTCAGGTGTGTTGGGAGAAATTTGCAAACTACTTTGAAGTGGAATTGAAAGAAGTAAAGCTAAGGGAAGGGTACTATGTGATGGATCCAATGAAAGCTGTGGAAATGGTAGATGACAACACCATTTGTGTTGCTGCTATTTTGGGTTCAACTCTTAATGGAGAATTTGAAGATGTCAAACTCTTGAATGATCTACTCATTCAAAAGAACAAGCAAACTGGATGGGATACACCAATTCATGTGGATGCAGCTAGTGGTGGATTCATTGCACCATTTATCTACCCAGAGTTGGAATGGGACTTTAGGCTTCCTTTAGTGAAAAGTATTAATGTGAGTGGACACAAATATGGACTTGTCTATGCTGGTATTGGTTGGGTTATTTGGAGGACTAAACAAGACTTGCCTGAACAACTCATTTTTCACATCAATTATCTTGGTGCTGATCAACTTACTTTTACTCTCAATTTCTCCAAAGGTTCAAGTCAAATCATTGCTCAATATTATCAACTTATCCGGTTGGGCTACGAGGGATATCGAAATGTAATGGAAAATTGTCGTGAAAACGCCATTGTGTTAAGAGAAGGACTTGAAAAAACAGGGCGTTTCAACATAGTCTCTAAAGATGAAGGTGTCCCATTGGTGGCCTTTTCCCTCAAGGACAATAGTCTTCACAACGAATTTGAGGTCTCTGAGACGCTCCGTAGGTTCGGGTGGATTGTCCCTGCCTACACTATGCCAGCTGACGCTCAACACATCACAGTGTTGCGCGTCGTGATTCGGGAGGACTTCTCCCGAACCCTGGCAGAGCGTCTCGTCTTTGACATCGTCAAAGTCCTCCACGAGCTCGACACGCTTCCGGCTAGGTTGAGTGCCAAAATGGAGGAGAATTTGGTGATCGAGAATAATAATGGAAAGAAAACAGAAATTGAAGTTCAAAGGGAAGTTACTGATTTTTGGAAGAAGTTTGTTTTAGCTAGGAAAGCAGCTGTTTGCTAGGGAAGGATTACTTGTTGAAGGAATAATTAAGTATTAGTAGTAACTTTTTATTATTAATTTTACAAAAATTACGAATTTTCTTTTTGACTATCTTGATGAGTAACTAACAAAATTTTATGAAGGATGATAGGTGTATCATCTTTTGTTCGATTACGATTGCTATGTTACATTACACCTCTATTTATTATTCTTGTGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g025530.2.1SL2.50ch04:22348382..22352638494+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g025530.2SL2.50ch04:22348272..223528344,563+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g025530.2.1.1SL2.50ch04:22348272..22348468197+1
exonexon:Solyc04g025530.2.1.2SL2.50ch04:22348942..22349146205+n/a
exonexon:Solyc04g025530.2.1.3SL2.50ch04:22350718..22350918201+n/a
exonexon:Solyc04g025530.2.1.4SL2.50ch04:22351086..22351300215+1
exonexon:Solyc04g025530.2.1.5SL2.50ch04:22351381..22351634254+2
exonexon:Solyc04g025530.2.1.6SL2.50ch04:22352045..2235209753+n/a
exonexon:Solyc04g025530.2.1.7SL2.50ch04:22352171..22352834664+n/a
intronintron:Solyc04g025530.2.1.2SL2.50ch04:22348469..22348941n/a+n/a
intronintron:Solyc04g025530.2.1.3SL2.50ch04:22349147..22350717n/a+n/a
intronintron:Solyc04g025530.2.1.4SL2.50ch04:22350919..22351085n/a+n/a
intronintron:Solyc04g025530.2.1.5SL2.50ch04:22351301..22351380n/a+n/a
intronintron:Solyc04g025530.2.1.6SL2.50ch04:22351635..22352044n/a+n/a
intronintron:Solyc04g025530.2.1.7SL2.50ch04:22352098..22352170n/a+n/a
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Related viewsNone found
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