Solanum lycopersicum mRNA Solyc04g045660.2.1

mRNA details  
Name
Solyc04g045660.2.1
Type
mRNA
Length
2,472
Organism
Solanum lycopersicum
Description
DNA mismatch repair protein MutL family protein (AHRD V1 ***- C5PD31_COCP7); contains Interpro domain(s) IPR011186 DNA mismatch repair protein Mlh1
Location(s)
SL2.50ch04:35309355..35348257
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0005524
  • GO:0006298
Length
38903
Nb exon
17
Sifter term
GO:0032137
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g045660.2.1 DNA mismatch repair protein MutL family protein (AHRD V1 ***- C5PD31_COCP7); contains Interpro domain(s) IPR011186 DNA mismatch repair protein Mlh1

TGTGAGCATGGAAAATGAAGAGAGTATTATTGAAGTGGAAATGGAAGACGAAGCCATTCCAGTGCCGATTCCGAAGGAGCCACCGAAGATTCAGCGGCTGGAAGAATGTGTGGTGAACAGAATAGCGGCTGGCGAAGTCATCCAAAGGCCAGTCTCTGCCGTGAAAGAGCTCATTGAGAACAGCCTGGATGCTGATTCCACCTCTATTTCCGTTGTTGTTAAGGATGGCGGTCTTAAACTTATCCAAGTTTCCGACGATGGCCATGGAATCCGTTATGAAGATTTGCCAATTTTATGCGAGAGGTATACTACGTCCAAGCTGAGTAAATTTGAAGATTTGCAGTCCATTAGGTCGATGGGATTTAGAGGAGAAGCCTTGGCTAGCATGACATATGTGGGTCACGTCACTGTCACCACCATTACTATGGGCCAGTTGCATGGATACAGGGCAACATATAGAGATGGTTTGATGGTGGATGAGCCAAAGGCTTGTGCTGCTGTCAAGGGTACCCAGATAATGATTGAAAATTTATTTTATAACATGGCTGCACGAAGGAAAACCCTTCAAAATTCTGCCGATGACTATCCAAAAATTGTTGACATTATTAGTAGGTTTGGAATTCATCACACACATGTGAGCTTCTCTTGTAGAAAGCATGGAGCTGGTAGAGCAGATGTTCACACTATTGCTACTTCTTCAAGGCTCGATGCAATTAGATCCGTTTATGGAGCTTCAGTTGCTCGAGATCTGATGAATATCGAAGTTTCTGATACTGGTCCATTAATTTCAGTTTTTAAGATGGATGGTTTCATCTCCAACTCTAATTATATTGCGAAGAAGACAACAATGGTGCTTTTTATAAATGATAGACTCATTGATTGTGGTGCTTTGAAGAGGGCAATTGAAATAGTCTATACTGCAACATTGCCTAAAGCATCAAAACCTTTCATATACATGTCAATCATTTTGCCGCCCGAGCATGTTGATGTGAATATACACCCAACAAAGAGAGAGGTAAGCTTTTTGAATCAAGAGTTCGTCATTGAGAAGATCCAGTCTGTAGTAGGGTCAAAATTGAGAAGCTCCAATGAGTCGAGGACATTCCAGGAACAGACTATGGATTTATCTTCATCTGGTCCAATGGCCACAAGTAAAGATTCCACTAAAGAATCGTCTCCTTCTGGGATAAAGTCACAAAAAGTGCCACATAAAATGGTACGAACAGATACTTTGGACCCTTCTGGAAGGCTGCACGCTTACATGCAAATGAAGCCTCCTGGTAATTCAGAAAGAGGTCCTTGCTTTAGCTCTGTGAGGTCTTCTATCAGACAAAGGAGGAATCCTAGTGACACCGCAGACCTCACTAGCATCCAAGAGCTCGTTAATGAGATTGATAATGACTGTCACCCTGGTCTATTGGATATTGTTAGGAATTGCACATATACTGGGATGGCGGATGAGATTTTTGCTTTGCTTCAACACAATACACACCTTTATCTTGTTAATGTGATTAACTTGAGTAAAGAGCTTATGTATCAGCAAGTTTTACGTCGGTTTGCCCATTTCAATGCAATTCAACTGAGTGAACCAGCATCATTACCTGAGTTAGTAATGCTTGCTCTGAAAGAAGAGGGTACAGATCCAGAAGGCAATGAAAGCAAAGAGCTAAGAGGAAAGATTGCCGAGATGAATACAGAACTGCTCAAGCAAAAGGCTGGAATGCTAGAGGAGTATTTTAGTATTCATATCGATTCAAATGGAAATATGTCTAGTCTTCCTGTTATACTGGATCAGTACACACCTGACATGGACCGCATCCCAGAATTTATACTTTGTTTAGGAAATGATGTGGTTGACTGGGAGGACGAGAAAATTTGTTTTCAGACAATTGCTGCTGTCCTAGGAAATTTTTATGCCATGCATCCGCCATTATTGCCTAATCCCTCAGGTGATGGCTTGAAATTCTACAGAAAGAGAGTACTTTCAAGTGGTTCAGAAGTAACTTCAATAGATAACATAGAGAATGATACCACGGAGGCTGAATTTGACGAAGAACTACGTTTGGAGGCTGAAAATGCCTGGGCTCAACGTGAATGGTCAATTCAGCATGTTCTGTTTCCCTCCCTCAGGCTCTTCTTCAAGCCCCCTACTTCCATGGTTACAAATGGAACTTTTGTTCAGGTTGCATCACTGGAAAAGCTCTACAGAATTTTCGAGAGATGTTAAACCTAGGAGAATTTTGATGTGGCCTCCTTGAAGCAAAAGGATGTAAAATGTACAGTTTCTGATTTGAGAAGGAAATTCCCTGGCCCCTACCCCCAAAGAACCAAAATATGAAAAACTGGTTCAACTTTTTTTTTGGTGTGAAGACAACCACCCCCCTACATCAAACGTTTTATTGTGAAAAGAAGCAAAAATGGAAGGAATACATTTTGTCTCTTTTACTCTATTCCATCAAACTAGTGGTGTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g045660.2.1SL2.50ch04:35309599..35348217729-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g045660.2SL2.50ch04:35309355..3534825738,903-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g045660.2.1.1SL2.50ch04:35347984..35348257274-n/a
exonexon:Solyc04g045660.2.1.10SL2.50ch04:35332540..3533263495-2
exonexon:Solyc04g045660.2.1.11SL2.50ch04:35332342..35332450109-1
exonexon:Solyc04g045660.2.1.12SL2.50ch04:35326287..35326452166-n/a
exonexon:Solyc04g045660.2.1.13SL2.50ch04:35325940..35326101162-n/a
exonexon:Solyc04g045660.2.1.14SL2.50ch04:35318335..353183373-n/a
exonexon:Solyc04g045660.2.1.15SL2.50ch04:35310959..35311127169-2
exonexon:Solyc04g045660.2.1.16SL2.50ch04:35309925..35310085161-n/a
exonexon:Solyc04g045660.2.1.17SL2.50ch04:35309355..35309644290-n/a
exonexon:Solyc04g045660.2.1.2SL2.50ch04:35347711..35347883173-1
exonexon:Solyc04g045660.2.1.3SL2.50ch04:35347065..3534713773-n/a
exonexon:Solyc04g045660.2.1.4SL2.50ch04:35346614..35346748135-n/a
exonexon:Solyc04g045660.2.1.5SL2.50ch04:35346296..35346506211-2
exonexon:Solyc04g045660.2.1.6SL2.50ch04:35345620..35345768149-n/a
exonexon:Solyc04g045660.2.1.7SL2.50ch04:35339542..3533964099-n/a
exonexon:Solyc04g045660.2.1.8SL2.50ch04:35337419..3533748870-2
exonexon:Solyc04g045660.2.1.9SL2.50ch04:35337160..35337292133-1
intronintron:Solyc04g045660.2.1.10SL2.50ch04:35332635..35337159n/a-n/a
intronintron:Solyc04g045660.2.1.11SL2.50ch04:35332451..35332539n/a-n/a
intronintron:Solyc04g045660.2.1.12SL2.50ch04:35326453..35332341n/a-n/a
intronintron:Solyc04g045660.2.1.13SL2.50ch04:35326102..35326286n/a-n/a
intronintron:Solyc04g045660.2.1.14SL2.50ch04:35318338..35325939n/a-n/a
intronintron:Solyc04g045660.2.1.15SL2.50ch04:35311128..35318334n/a-n/a
intronintron:Solyc04g045660.2.1.16SL2.50ch04:35310086..35310958n/a-n/a
intronintron:Solyc04g045660.2.1.17SL2.50ch04:35309645..35309924n/a-n/a
intronintron:Solyc04g045660.2.1.2SL2.50ch04:35347884..35347983n/a-n/a
intronintron:Solyc04g045660.2.1.3SL2.50ch04:35347138..35347710n/a-n/a
intronintron:Solyc04g045660.2.1.4SL2.50ch04:35346749..35347064n/a-n/a
intronintron:Solyc04g045660.2.1.5SL2.50ch04:35346507..35346613n/a-n/a
intronintron:Solyc04g045660.2.1.6SL2.50ch04:35345769..35346295n/a-n/a
intronintron:Solyc04g045660.2.1.7SL2.50ch04:35339641..35345619n/a-n/a
intronintron:Solyc04g045660.2.1.8SL2.50ch04:35337489..35339541n/a-n/a
intronintron:Solyc04g045660.2.1.9SL2.50ch04:35337293..35337418n/a-n/a
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Related viewsNone found
http%3A%2F%2Fsolgenomics.net%3A8080%2Ffeature%2F17794189%2Fdetails feature 17794189
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